prot_H-paniculata_contig2557.6959.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig2557.6959.1
Unique Name	prot_H-paniculata_contig2557.6959.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	103

Homology

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BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 2.950e-58
Identity = 86/102 (84.31%), Postives = 96/102 (94.12%), Query Frame = 0

Query:    1 MNRIDYSEKYVDGAFEYRHVMLPKEQAKKVPKSRLLAEDEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPVTGQVDPELEREAKEKYAEELSSNMRK 102
            MNRIDYSEKYVDG+FEYRHV+LPKE AK +P+SRLL EDEWR+LGVQQSRGW+HYA+H PEPHILLFRRPLGT+PVTG+VDPELEREAKEKYAEELS  +RK
Sbjct:    1 MNRIDYSEKYVDGSFEYRHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102

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BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA)

HSP 1 Score: 162 bits (410), Expect = 5.400e-50
Identity = 73/99 (73.74%), Postives = 88/99 (88.89%), Query Frame = 0

Query:    3 RIDYSEKYVDGAFEYRHVMLPKEQAKKVPKSRLLAEDEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPVTGQVDPELEREAKEKYAEELSSNMR 101
            +I+YSEKY DG +EYRHV+LPK+ A+ +PK+R L E EWRN+GVQQSRGWEHYA H+PEPHILLFRRPLGTDPV+G+VDPELEREA+EKY +EL+ N R
Sbjct:    5 QIEYSEKYQDGKYEYRHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELAVNQR 103

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BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA)

HSP 1 Score: 162 bits (410), Expect = 9.480e-50
Identity = 76/101 (75.25%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    2 NRIDYSEKYVDGAFEYRHVMLPKEQAKKVPKSRLLAEDEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPVTGQVDPELEREAKEKYAEELSSNMRK 102
            +RI+YSEKY D AFEYRHV+LPKE AK +PK+RLL E EWR +GVQQSRGW+HYAIHRPEPHILLFRRPLGTDPVTG+VD ELER+AK+ Y   L+ N RK
Sbjct:   22 SRIEYSEKYTDDAFEYRHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLAVNQRK 122

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BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot
Match: A0A7S1UE56_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE56_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.880e-49
Identity = 75/99 (75.76%), Postives = 85/99 (85.86%), Query Frame = 0

Query:    2 NRIDYSEKYVDGAFEYRHVMLPKEQAKKVPKSRLLAEDEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPVTGQVDPELEREAKEKYAEELSSNM 100
            +RI+YSEKY D  FEYRHV+LPKE AK +PK+R+LAE EWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDP TG+VD +L+REAKE Y   L  N+
Sbjct:   36 SRIEYSEKYNDEDFEYRHVILPKELAKSIPKTRILAEQEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDADLQREAKESYLRTLRENL 134

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BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA)

HSP 1 Score: 158 bits (399), Expect = 2.570e-48
Identity = 73/101 (72.28%), Postives = 88/101 (87.13%), Query Frame = 0

Query:    2 NRIDYSEKYVDGAFEYRHVMLPKEQAKKVPKSRLLAEDEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPVTGQVDPELEREAKEKYAEELSSNMRK 102
            +RI+YSEKY+D   EYRHV+LPKE A+ +PK RLL E EWR +GVQQSRGW+HYAIHRPEPHILLFRRPLGTDPVTG+V+ ELEREAKEKYAE ++  +++
Sbjct:    3 SRIEYSEKYMDDNHEYRHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESMNGAVQR 103

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BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.280e-47
Identity = 72/98 (73.47%), Postives = 82/98 (83.67%), Query Frame = 0

Query:    3 RIDYSEKYVDGAFEYRHVMLPKEQAKKVPKSRLLAEDEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPVTGQVDPELEREAKEKYAEELSSNM 100
            RI+YSEKY D  +EYRHV+LPKE AK +PK+RLL+E EWR +GVQQSRGW HYAIHRPEPHILLFRRPLGTDPVTG++DP LEREAK+ Y   L  N 
Sbjct:   22 RIEYSEKYQDDKYEYRHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLELNQ 119

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BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 3.840e-47
Identity = 72/98 (73.47%), Postives = 85/98 (86.73%), Query Frame = 0

Query:    3 RIDYSEKYVDGAFEYRHVMLPKEQAKKVPKSRLLAEDEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPVTGQVDPELEREAKEKYAEELSSNM 100
            RI+YSEKY D +FEYRHV+LPK+ AK +PKSR+L E EWR LGVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+G+VDP LE+EAK+ Y +EL+  M
Sbjct:    4 RIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELADKM 101

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BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot
Match: A0A835YHQ2_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ2_9STRA)

HSP 1 Score: 155 bits (391), Expect = 4.130e-47
Identity = 74/100 (74.00%), Postives = 85/100 (85.00%), Query Frame = 0

Query:    3 RIDYSEKYVDGAFEYRHVMLPKEQAKKVPKSRLLAEDEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPVTGQVDPELEREAKEKYAEELSSNMRK 102
            RI+YS+KY D  +EYRHV+LPKE A+ +P +RLL E+EWR LGVQQSRGW HYAIHRPEPHILLF RPLGTDP++GQVDPE EREAKE YAE L  NMR+
Sbjct:    4 RIEYSDKYQDSNWEYRHVILPKELARGLPNTRLLQEEEWRLLGVQQSRGWVHYAIHRPEPHILLFHRPLGTDPLSGQVDPEKEREAKEGYAEHLLLNMRR 103

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BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot
Match: A0A7R9U1M9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1M9_9STRA)

HSP 1 Score: 155 bits (393), Expect = 6.080e-47
Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 0

Query:    2 NRIDYSEKYVDGAFEYRHVMLPKEQAKKVPKSRLLAEDEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPVTGQVDPELEREAKEKYAEELSSNM 100
            +RI+YSEKY D  FEYRHV+LPKE AK++ K++LL++ EWR LGVQQSRGWEHYAIHRPEPHILLFRRPLGTDP TG+VDPE +REAKE Y   L+ N+
Sbjct:   39 SRIEYSEKYNDQDFEYRHVILPKELAKRLSKTKLLSDAEWRELGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDPEAQREAKEAYMRSLTENL 137

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BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.730e-46
Identity = 71/91 (78.02%), Postives = 82/91 (90.11%), Query Frame = 0

Query:    2 NRIDYSEKYVDGAFEYRHVMLPKEQAKKVPKSRLLAEDEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPVTGQVDPELEREAKEKY 92
            +RI+YSEKY D A EYRHV+LPK+ AK +PK+RLL+E EWR +GVQQSRGW HYAIHRPEPHILLFRRPLGTDP +GQVDPELEREA+E+Y
Sbjct:    5 SRIEYSEKYADTANEYRHVILPKDLAKTLPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEY 95

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2557.6959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L2I6_9PHAE	2.950e-58	84.31	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S3MEH0_9STRA	5.400e-50	73.74	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S2BWV6_9STRA	9.480e-50	75.25	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S1UE56_9STRA	2.880e-49	75.76	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
W7T145_9STRA	2.570e-48	72.28	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S2BBH9_9STRA	2.280e-47	73.47	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
D7G7T5_ECTSI	3.840e-47	73.47	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A835YHQ2_9STRA	4.130e-47	74.00	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7R9U1M9_9STRA	6.080e-47	72.73	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A6S9ANL1_9STRA	1.730e-46	78.02	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000789	Cyclin-dependent kinase, regulatory subunit	PRINTS	PR00296	CYCLINKINASE	coord: 18..32 score: 67.69 coord: 40..54 score: 76.92 coord: 3..17 score: 56.41 coord: 55..69 score: 82.05
IPR000789	Cyclin-dependent kinase, regulatory subunit	SMART	SM01084	CKS_2	coord: 3..72 e-value: 3.7E-43 score: 159.4
IPR000789	Cyclin-dependent kinase, regulatory subunit	PFAM	PF01111	CKS	coord: 4..70 e-value: 5.7E-36 score: 122.6
IPR000789	Cyclin-dependent kinase, regulatory subunit	PROSITE	PS00945	CKS_2	coord: 58..68
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	GENE3D	3.30.170.10		coord: 1..76 e-value: 9.9E-38 score: 129.9
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	SUPERFAMILY	55637	Cell cycle regulatory proteins	coord: 2..75
None	No IPR available	PANTHER	PTHR23415	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	coord: 3..75
None	No IPR available	PANTHER	PTHR23415:SF29	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT-RELATED	coord: 3..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2557	contig	H-paniculata_contig2557:3453..8382 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2557.6959.1	mRNA_H-paniculata_contig2557.6959.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig2557 3388..9072 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig2557.6959.1 ID=prot_H-paniculata_contig2557.6959.1|Name=mRNA_H-paniculata_contig2557.6959.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
MNRIDYSEKYVDGAFEYRHVMLPKEQAKKVPKSRLLAEDEWRNLGVQQSR
GWEHYAIHRPEPHILLFRRPLGTDPVTGQVDPELEREAKEKYAEELSSNM
RK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000789	Cyclin-dep_kinase_reg-sub
IPR036858	Cyclin-dep_kinase_reg-sub_sf