prot_H-paniculata_contig2556.6958.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2556.6958.1
Unique Nameprot_H-paniculata_contig2556.6958.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length302
Homology
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BLAST of mRNA_H-paniculata_contig2556.6958.1 vs. uniprot
Match: D7G7L4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L4_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 2.000e-38
Identity = 73/122 (59.84%), Postives = 87/122 (71.31%), Query Frame = 0 
Query:  132 LKTMRPEELAKLSKAASEMEKSKLEDKQKVAEFVGKTPELADLVDDCYICMEPLLNNIGTSKFGVLSWHCRCTVAQKAHSSCLLAKICR----GDKCDMCSSPMMFESPRGTRNEATIKLFR 249
            +K M+P EL K+SKAA  +EK KLED +KVA FV K     +LV DCYIC+EPLLNNIGT+KFGV+SW CRCTV QKAHS+C+ +KIC        CDMC SPMMFE  R    +ATI+  R
Sbjct:   27 MKHMKPAELRKISKAAMILEKRKLEDNKKVAAFVAKNDNFVELVGDCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAHSACVFSKICHVANSQGTCDMCDSPMMFEKTRRKGTQATIRFHR 148
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BLAST of mRNA_H-paniculata_contig2556.6958.1 vs. uniprot
Match: D7G7L3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L3_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 2.240e-33
Identity = 65/122 (53.28%), Postives = 84/122 (68.85%), Query Frame = 0 
Query:  132 LKTMRPEELAKLSKAASEMEKSKLEDKQKVAEFVGKTPELADLVDDCYICMEPLLNNIGTSKFGVLSWHCRCTVAQKAHSSCLLAKICRGD----KCDMCSSPMMFESPRGTRNEATIKLFR 249
            LK MRP+EL  + +AA+ + K K++D++K+A F  K     +LV+DCYIC+EPLLNNIGT+KFGV+SW CRCTV QKAHS C+ +KIC       KCDMC+SPM FE        A I+  R
Sbjct:   32 LKRMRPDELMAIGEAATALAKRKMDDRKKIAAFAEKHDNFVELVEDCYICLEPLLNNIGTTKFGVVSWKCRCTVPQKAHSRCVFSKICHATNGQGKCDMCNSPMEFEKTTRKGTHAMIRFHR 153
[Close]
BLAST of mRNA_H-paniculata_contig2556.6958.1 vs. uniprot
Match: A0A6H5JF52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF52_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.040e-25
Identity = 52/93 (55.91%), Postives = 61/93 (65.59%), Query Frame = 0 
Query:  161 VAEFVGKTPELADLVDDCYICMEPLLNNIGTSKFGVLSWHCRCTVAQKAHSSCLLAKICRGD----KCDMCSSPMMFESPRGTRNEATIKLFR 249
            +A F  K     +LV+DCYIC+EPLLNNIGT+KFGV+SW CRCTV QKAHS C+ +KIC       KCDMC SPM FE        A I+  R
Sbjct:   17 IAAFAEKHDNFVELVEDCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAHSRCVFSKICHASNGQGKCDMCKSPMEFEKTTRKGTHAMIRFHR 109
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2556.6958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7L4_ECTSI2.000e-3859.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G7L3_ECTSI2.240e-3353.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF52_9PHAE1.040e-2555.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2556contigH-paniculata_contig2556:9906..17882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2556.6958.1mRNA_H-paniculata_contig2556.6958.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2556 9632..17882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2556.6958.1 ID=prot_H-paniculata_contig2556.6958.1|Name=mRNA_H-paniculata_contig2556.6958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=302bp
MPHRARTRSAEVASGSQRVYHSSGSPAAARNSGSSLNRRRGSGSSSRSQQ
SSGQSSRRSPSRARFPGSSLVTPATELVSDDASPRGGSSSVGNSRIRRRE
EDAANTDGGGGADDDNEHEGCDAAMKRMMKKLKTMRPEELAKLSKAASEM
EKSKLEDKQKVAEFVGKTPELADLVDDCYICMEPLLNNIGTSKFGVLSWH
CRCTVAQKAHSSCLLAKICRGDKCDMCSSPMMFESPRGTRNEATIKLFRK
KKKSAHSARSARSARSSLDQDETSMFSGESSGPESFISADESGQDEQEDD
GE
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