prot_H-paniculata_contig2555.6956.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2555.6956.1
Unique Nameprot_H-paniculata_contig2555.6956.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length589
Homology
BLAST of mRNA_H-paniculata_contig2555.6956.1 vs. uniprot
Match: A0A6H5L268_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L268_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 1.640e-90
Identity = 256/585 (43.76%), Postives = 307/585 (52.48%), Query Frame = 0
Query:   85 RKPFQVDASVVREASERRVAPGTPINMLKKRIKRAXXXXXXXXXGVPAQSTAGGQHGGSFRPTVGAKATVAATGGGRTQVGGGTVYVSKGLSRAARTKHGNVGGASSHILDAARMKKVSEYLKSQISEANMLLEIAGVDAARTLLADLLFCTGDGRGVGELALYWAARAKLEEDAGFHSAARRTLDEGQAYISMPMQQKVMEKVLSAFETRMNDRAEADVVRLLNSSG-----SSGGSHGNSPTSCTPFRYDPNDLSMEDDVGVSNVGSAIKNLNFSRIASAEDSGDSTSREKKLQHHYRQRQKTLGRHSPVSSSSLAGGG----------MKLDVADENTAGFLDRSG------GSDALSGVVYSDDDSDLSISDIDEGVLARAKAFTDEEEARNARISKEQ----------DASSSSASA--GS----DAKAEVSQ---MSAGKEEETKQVAEEGRENKGTTMPPPDSQPSGSGQRK--------------------------------GTPHPK--------NRSSTDEDEKGDGGSFLAQVESKDKDGKRTLTPVRRSRRFN-TAKEPTPSPLRKEMEALL 588
            RKPFQVD   +++ASERRV PGTPI+ LKKR+KR     XXXXX                                                  AR   G++ G S   LD+AR K+VS+YLKSQISEANMLLEIAGVDAARTLL DLL+  G GRGVGELALYWAARAKLEEDAG +  AR+ LD+G+AYISMP QQKVM KV++AFE RMN RAEAD+ RLL  S      ++  ++ NSP S  PFRYDPNDLS EDD G  +  SAIKNLNFS+IA         S ++      R    T G  S  S ++ +G            ++ D  D   A    + G      G ++ SGV+YSDDDSDLS+SDIDEGV+ARA AF  EE+AR AR+  E+          D     A A  GS    D  AEV +   + AG   E     +E  +  G      D   S +                                    GTPHPK         R    + E+   GSF+ QVE   KDGKRTLTPVRRSRR +  AKEPTP+ LRKEMEA+L
Sbjct:   78 RKPFQVDTRSIQQASERRVQPGTPIHSLKKRLKRTAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------XXXXXXXXXXARVP-GHMNGVS-RSLDSARTKEVSDYLKSQISEANMLLEIAGVDAARTLLGDLLYSAGGGRGVGELALYWAARAKLEEDAGMYLEARKLLDDGEAYISMPTQQKVMAKVVAAFEGRMNARAEADIDRLLEDSVDGLSLNNSAANSNSPASSAPFRYDPNDLSTEDDTG--SAQSAIKNLNFSKIAKESGGRGGASVDRAS----RAGSSTSGSGSNTSLTTRSGASPDWMRGANEEVEEDEKDSQAASSGAKGGATASGEGIESFSGVIYSDDDSDLSVSDIDEGVIARANAFAAEEDARKARMEAEEAGRVPGGVARDVVDDGAGAKDGSLREEDVVAEVPEGADLDAGAAREATAGNDERAKKSGANGDSNDRGVSSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTPHPKPLVKRTTPRRGKDVDGEELSPGSFITQVEGTGKDGKRTLTPVRRSRRISGVAKEPTPALLRKEMEAML 637          
BLAST of mRNA_H-paniculata_contig2555.6956.1 vs. uniprot
Match: D7G7W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W5_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 3.640e-69
Identity = 167/316 (52.85%), Postives = 193/316 (61.08%), Query Frame = 0
Query:   49 QSGKESRHTGALAERCANTNRTYKKPASRSKKGAVKRKPFQVDASVVREASERRVAPGTPINMLKKRIKRAXXXXXXXXXGVPAQSTAGGQHGGSFRPTVGAKATVAATGGGRTQVGGGTVYVSKGLSRAARTKHGNVGGASSHILDAARMKKVSEYLKSQISEANMLLEIAGVDAARTLLADLLFCTGDGRGVGELALYWAARAKLEEDAGFHSAARRTLDEGQAYISMPMQQKVMEKVLSAFETRMNDRAEADVVRLLNSSG-----SSGGSHGNSPTSCTPFRYDPNDLSMEDDVGVSNVGSAIKNLNFSRIA 359
            ++GK+    G L  R    NR  K+ A        +RKPFQVD   +++ASERRV PGTPI+ LKKR+KR    XXXXXX                                                  AR   G+V G S   LD+AR K+VS+YLKSQISEANMLLEIAGVDAARTLL DLL C G GRGVGELALYWAARAKLEEDAG +  AR+ LD+G+AYISMP QQKVM KV++AFE RMN RAEAD+ RLL  S      +   ++ NSP S TPFRYDPNDLS EDD G  +  SAIKNLNFS+IA
Sbjct:   48 RAGKKDVAKGVLQARPGAGNRVNKRTAP------PQRKPFQVDTRSIQQASERRVQPGTPIHSLKKRLKRTAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXARVP-GHVNGVS-RSLDSARTKEVSDYLKSQISEANMLLEIAGVDAARTLLGDLLSCAGAGRGVGELALYWAARAKLEEDAGMYLEARKLLDDGEAYISMPTQQKVMAKVMAAFEGRMNARAEADIDRLLEDSVDGLSLNDSAANSNSPASSTPFRYDPNDLSTEDDTG--SAQSAIKNLNFSKIA 337          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2555.6956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L268_9PHAE1.640e-9043.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7W5_ECTSI3.640e-6952.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2555contigH-paniculata_contig2555:6376..16309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2555.6956.1mRNA_H-paniculata_contig2555.6956.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2555 6285..17442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2555.6956.1 ID=prot_H-paniculata_contig2555.6956.1|Name=mRNA_H-paniculata_contig2555.6956.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=589bp
MNTISSDAGLSRKEMLKKWRAQREAGAALISKSINKSENPAGASARSQQS
GKESRHTGALAERCANTNRTYKKPASRSKKGAVKRKPFQVDASVVREASE
RRVAPGTPINMLKKRIKRAAAAAAAAAAGVPAQSTAGGQHGGSFRPTVGA
KATVAATGGGRTQVGGGTVYVSKGLSRAARTKHGNVGGASSHILDAARMK
KVSEYLKSQISEANMLLEIAGVDAARTLLADLLFCTGDGRGVGELALYWA
ARAKLEEDAGFHSAARRTLDEGQAYISMPMQQKVMEKVLSAFETRMNDRA
EADVVRLLNSSGSSGGSHGNSPTSCTPFRYDPNDLSMEDDVGVSNVGSAI
KNLNFSRIASAEDSGDSTSREKKLQHHYRQRQKTLGRHSPVSSSSLAGGG
MKLDVADENTAGFLDRSGGSDALSGVVYSDDDSDLSISDIDEGVLARAKA
FTDEEEARNARISKEQDASSSSASAGSDAKAEVSQMSAGKEEETKQVAEE
GRENKGTTMPPPDSQPSGSGQRKGTPHPKNRSSTDEDEKGDGGSFLAQVE
SKDKDGKRTLTPVRRSRRFNTAKEPTPSPLRKEMEALL*
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