mRNA_H-paniculata_contig2555.6956.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig2555.6956.1
Unique Name	mRNA_H-paniculata_contig2555.6956.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig2555.6956.1 vs. uniprot
Match: A0A6H5L268_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L268_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 4.230e-88
Identity = 256/585 (43.76%), Postives = 307/585 (52.48%), Query Frame = 2

Query:  344 RKPFQVDASVVREASERRVAPGTPINMLKKRIKRAXXXXXXXXXGVPAQSTAGGQHGGSFRPTVGAKATVAATGGGRTQVGGGTVYVSKGLSRAARTKHGNVGGASSHILDAARMKKVSEYLKSQISEANMLLEIAGVDAARTLLADLLFCTGDGRGVGELALYWAARAKLEEDAGFHSAARRTLDEGQAYISMPMQQKVMEKVLSAFETRMNDRAEADVVRLLNSSG-----SSGGSHGNSPTSCTPFRYDPNDLSMEDDVGVSNVGSAIKNLNFSRIASAEDSGDSTSREKKLQHHYRQRQKTLGRHSPVSSSSLAGGG----------MKLDVADENTAGFLDRSG------GSDALSGVVYSDDDSDLSISDIDEGVLARAKAFTDEEEARNARISKEQ----------DASSSSASA--GS----DAKAEVSQ---MSAGKEEETKQVAEEGRENKGTTMPPPDSQPSGSGQRK--------------------------------GTPHPK--------NRSSTDEDEKGDGGSFLAQVESKDKDGKRTLTPVRRSRRFN-TAKEPTPSPLRKEMEALL 1855
            RKPFQVD   +++ASERRV PGTPI+ LKKR+KR     XXXXX                                                  AR   G++ G S   LD+AR K+VS+YLKSQISEANMLLEIAGVDAARTLL DLL+  G GRGVGELALYWAARAKLEEDAG +  AR+ LD+G+AYISMP QQKVM KV++AFE RMN RAEAD+ RLL  S      ++  ++ NSP S  PFRYDPNDLS EDD G  +  SAIKNLNFS+IA         S ++      R    T G  S  S ++ +G            ++ D  D   A    + G      G ++ SGV+YSDDDSDLS+SDIDEGV+ARA AF  EE+AR AR+  E+          D     A A  GS    D  AEV +   + AG   E     +E  +  G      D   S +                                    GTPHPK         R    + E+   GSF+ QVE   KDGKRTLTPVRRSRR +  AKEPTP+ LRKEMEA+L
Sbjct:   78 RKPFQVDTRSIQQASERRVQPGTPIHSLKKRLKRTAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------XXXXXXXXXXARVP-GHMNGVS-RSLDSARTKEVSDYLKSQISEANMLLEIAGVDAARTLLGDLLYSAGGGRGVGELALYWAARAKLEEDAGMYLEARKLLDDGEAYISMPTQQKVMAKVVAAFEGRMNARAEADIDRLLEDSVDGLSLNNSAANSNSPASSAPFRYDPNDLSTEDDTG--SAQSAIKNLNFSKIAKESGGRGGASVDRAS----RAGSSTSGSGSNTSLTTRSGASPDWMRGANEEVEEDEKDSQAASSGAKGGATASGEGIESFSGVIYSDDDSDLSVSDIDEGVIARANAFAAEEDARKARMEAEEAGRVPGGVARDVVDDGAGAKDGSLREEDVVAEVPEGADLDAGAAREATAGNDERAKKSGANGDSNDRGVSSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTPHPKPLVKRTTPRRGKDVDGEELSPGSFITQVEGTGKDGKRTLTPVRRSRRISGVAKEPTPALLRKEMEAML 637

[Close]

BLAST of mRNA_H-paniculata_contig2555.6956.1 vs. uniprot
Match: D7G7W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W5_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 2.400e-66
Identity = 167/316 (52.85%), Postives = 193/316 (61.08%), Query Frame = 2

Query:  236 QSGKESRHTGALAERCANTNRTYKKPASRSKKGAVKRKPFQVDASVVREASERRVAPGTPINMLKKRIKRAXXXXXXXXXGVPAQSTAGGQHGGSFRPTVGAKATVAATGGGRTQVGGGTVYVSKGLSRAARTKHGNVGGASSHILDAARMKKVSEYLKSQISEANMLLEIAGVDAARTLLADLLFCTGDGRGVGELALYWAARAKLEEDAGFHSAARRTLDEGQAYISMPMQQKVMEKVLSAFETRMNDRAEADVVRLLNSSG-----SSGGSHGNSPTSCTPFRYDPNDLSMEDDVGVSNVGSAIKNLNFSRIA 1168
            ++GK+    G L  R    NR  K+ A        +RKPFQVD   +++ASERRV PGTPI+ LKKR+KR    XXXXXX                                                  AR   G+V G S   LD+AR K+VS+YLKSQISEANMLLEIAGVDAARTLL DLL C G GRGVGELALYWAARAKLEEDAG +  AR+ LD+G+AYISMP QQKVM KV++AFE RMN RAEAD+ RLL  S      +   ++ NSP S TPFRYDPNDLS EDD G  +  SAIKNLNFS+IA
Sbjct:   48 RAGKKDVAKGVLQARPGAGNRVNKRTAP------PQRKPFQVDTRSIQQASERRVQPGTPIHSLKKRLKRTAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXARVP-GHVNGVS-RSLDSARTKEVSDYLKSQISEANMLLEIAGVDAARTLLGDLLSCAGAGRGVGELALYWAARAKLEEDAGMYLEARKLLDDGEAYISMPTQQKVMAKVMAAFEGRMNARAEADIDRLLEDSVDGLSLNDSAANSNSPASSTPFRYDPNDLSTEDDTG--SAQSAIKNLNFSKIA 337

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2555.6956.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2555.6956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L268_9PHAE	4.230e-88	43.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7W5_ECTSI	2.400e-66	52.85	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2555	contig	H-paniculata_contig2555:6285..17442 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	12
Model size	2991
Cds size	1767
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2555.6956.1	prot_H-paniculata_contig2555.6956.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig2555 6376..16309 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929755.017992-UTR-H-paniculata_contig2555:6284..6375	1622929755.017992-UTR-H-paniculata_contig2555:6284..6375	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2555 6285..6375 +
1691480997.0504167-UTR-H-paniculata_contig2555:6284..6375	1691480997.0504167-UTR-H-paniculata_contig2555:6284..6375	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2555 6285..6375 +
1622929755.2271929-UTR-H-paniculata_contig2555:16309..17442	1622929755.2271929-UTR-H-paniculata_contig2555:16309..17442	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2555 16310..17442 +
1691480997.190531-UTR-H-paniculata_contig2555:16309..17442	1691480997.190531-UTR-H-paniculata_contig2555:16309..17442	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2555 16310..17442 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig2555:6285..17442+
coding sequence from alignment at H-paniculata_contig2555:6285..17442+

protein sequence of mRNA_H-paniculata_contig2555.6956.1

>prot_H-paniculata_contig2555.6956.1 ID=prot_H-paniculata_contig2555.6956.1|Name=mRNA_H-paniculata_contig2555.6956.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=589bp
MNTISSDAGLSRKEMLKKWRAQREAGAALISKSINKSENPAGASARSQQS
GKESRHTGALAERCANTNRTYKKPASRSKKGAVKRKPFQVDASVVREASE
RRVAPGTPINMLKKRIKRAAAAAAAAAAGVPAQSTAGGQHGGSFRPTVGA
KATVAATGGGRTQVGGGTVYVSKGLSRAARTKHGNVGGASSHILDAARMK
KVSEYLKSQISEANMLLEIAGVDAARTLLADLLFCTGDGRGVGELALYWA
ARAKLEEDAGFHSAARRTLDEGQAYISMPMQQKVMEKVLSAFETRMNDRA
EADVVRLLNSSGSSGGSHGNSPTSCTPFRYDPNDLSMEDDVGVSNVGSAI
KNLNFSRIASAEDSGDSTSREKKLQHHYRQRQKTLGRHSPVSSSSLAGGG
MKLDVADENTAGFLDRSGGSDALSGVVYSDDDSDLSISDIDEGVLARAKA
FTDEEEARNARISKEQDASSSSASAGSDAKAEVSQMSAGKEEETKQVAEE
GRENKGTTMPPPDSQPSGSGQRKGTPHPKNRSSTDEDEKGDGGSFLAQVE
SKDKDGKRTLTPVRRSRRFNTAKEPTPSPLRKEMEALL*

mRNA from alignment at H-paniculata_contig2555:6285..17442+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig2555.6956.1 ID=mRNA_H-paniculata_contig2555.6956.1|Name=mRNA_H-paniculata_contig2555.6956.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11158bp|location=Sequence derived from alignment at H-paniculata_contig2555:6285..17442+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGCTAGATAAGGCAGTCAGAAGAACTTGCGCGCTTTGGTAGATTGGGTCT
GTGCGTTCATCGTGGGATAGACCAGGTAAATAGAGAGAAAAATGAACACC
ATAAGCAGCGATGCGGGTCTCTCGCGAAAAGAAATGCTGAAAAAGTGGCG
AGCGCAGAGAGAAGCGGGGGCGGCGCTAATCTCTAAGTCCATCAACAAGT
CAGAGAATCCAGCGGGTGCAAGCGCGAGGTCACAACAGTCAGGCAAGGAG
AGCAGGCACACTGGCGCGCTTGCGGAGAGATGTGCAAACACCAACAGGAC
TTACAAAAAGCCTGCATCACGCTCTAAGAAAGGAGCAGTTAAGCGTAAGC
CATTTCAGGTGAGCTTTTGTTAACGTGGTGACCATGAGCTTTGGATCCGG
CGAATGGGTGCTTCCAGGCGAAGAGCAAACACAACGGAAATATCAACAAC
ACATACGTCGAGTACAGGTCTAGATTTCGCTTGTCTGCGCTGATCATACT
TTCTGTCTCTCTGTTGTATCTACAAAGCGGACAGGTATCAAAACGTGCGG
AAGACTAACCCTAAGTGCATGCAGCCAGCTTACACATGTGTGTGAGACAG
CATGGTGGAGTCCAGTATCTACAAAACAAACCACTTTGTACGTTTACGCA
AGACACACAAAGCTTGTTTCCATCATCCAACGTAGTCTTGCCGTTCTCCT
TGATATAGGTGGATGCAAGCGTGGTGCGTGAGGCAAGCGAGCGCCGAGTT
GCCCCAGGCACTCCAATCAACATGCTTAAGAAACGCATTAAGCGCGCGGC
AGCAGCGGCAGCGGCGGCGGCGGCGGGCGTCCCTGCTCAATCCACCGCTG
GTGGCCAGCACGGTGGTAGCTTTAGACCAACAGTTGGCGCAAAGGCGACC
GTGGCAGCGACTGGGGGGGGAAGGACACAGGTTGGCGGTGGTACCGTCTA
CGTCAGCAAAGGGCTGAGTCGCGCTGCCCGGACGAAGCACGGTAATGTTG
GCGGTGCTTCGAGTCACATTTTGGATGCTGCCCGGATGAAGAAGGTCTCG
GAATATCTCAAAAGCCAAATCAGCGAGGCAAACATGCTTTTGGAGGTACG
ATTGGTTCATTACAACACCATTGCAATGAAGACAGACATACAGTGCAGGA
TTGGCACTGCCGCTCTTTGTCACTGCAGGGAAGAACTTGCTCCTTGTAGC
TATCCCTGATGCGCACAGGTGATGCACGGTCACTACGCGTGGCAGGAGCA
GTTCCTTCACACACGTTACATGCTCGGGCTGAGTAGCTTTTTCTACGGTA
CATCCAGTTTCGTTGAACCAAGGACGTCCGCTGTGAAGAAACAGAGGGAT
TCTGAGTGACCAACATGAACGGCAGAATTGCCTTCACTGCTCTGCAAGCG
CAACGAAATATCGCAGTACCACATCTACGCAAAGCGAAACCAGCTGCGTT
TGGCTTCACAATGCACGCTGTGTATACAAAATTGACAGCGTGCTGCTGCT
TTTTCTGCTGCTTGCACTACAGACTAGCAATTGTTGAGTCAACACAACCC
AGCAACCCAACATGGTGAAAAGATTAAAAAGGAAGGTCCAACAGGAAGTA
CACGAGAAAAGCTATGCTTTACCCGTGCCAAGTGAAATATTGGGGATAAT
GGATCCAATTCTAGAGCAACATTAAACAGAAAAACTCGACGGCAACCCTC
TGAGTATTTGTTTTTCTAAACAAGCTCCGCCATGCAAACGGTTAGTCGCG
TCTTGGTCAACTGGCCACTTTCTCAAACTACAAACTCAAGTCTTGCATGT
ATCTAATGGTTTGCAGATCGCTGGAGTGGACGCAGCTCGCACGCTCCTGG
CAGATCTCCTCTTTTGTACGGGCGATGGGAGGGGAGTCGGGGAGCTGGCA
CTATACTGGGCTGCCCGTGCAAAGCTTGAAGAGGTAATGCAAAGCAACGT
AGGACAGGTGGATGTGATATGAGTTGAATGAAACAAACCGTAGTGGATCT
CAAGCGCAAATGTTCTGCTCGAAAACCAGGTTAGTCATACCTGTACTGTC
TGCGAGGGAATGGTGCTGACTACGGTCCAATCTGCCAGAGAATCTCTGAC
TCGCCGTACTGAAGGCGTGCATGCTGCCACAGTTGGAAGCGTAGGTGATA
TGCTAGTTGGATGCCGAAAGGTGCAATGAGCAAGGTTAGGAGCGTGTTTT
GCTCAACTTCTTTATGACTGCTGAGCACTATGTGCAAGACAATTCAACTG
GCATGAGTTATATCGCTTTGGGTGATCCCAGTGTTGAAACTAGCTTTTCT
CGAGAGCTGAGGTGATGGTGAAACGTCTTTGTAGAAGATTTTATGGAAAT
ATGTCATTAGATAGGCATGCTCTAGCACATGGAAAGGTCTAGTTCCTCCT
CGTGACGTATTAAAATCGAAAAGTAACTGTCGCACGCTGTGATGCATTTC
ATCGTTGGCGTACAGTATCTTAGCTACATATGTCACCAGTTGTTAAGATT
TTACTGGTCTCATCATGGGTGCGTCGGCATTTTGTTTCTCGCACGATACG
TTTAGCTTTTGCACATGTCGACGATTTGATCAAGGCTTTTCAATCTTCGG
CTAACCTTCGTTTCGCGTGGATAATGTGCAACTGATGGTGATCGACGTTG
TGTTTCCAGAAATCAAACATCGAATATTTGCAAACGGTTTGCACCCCTGT
CCATTCACAAATATGGACGAACAGGATGCCGGATTCCACAGCGCGGCGAG
AAGGACACTCGACGAGGGCCAGGCGTACATTTCCATGCCCATGCAGCAGA
AAGTTATGGAAAAGGTGTGCGAAGCGTTTGGATCGAAAACAAAACTCAGA
GACGTTTTGAGCGAAAGTACCAAATAAAAGGCTCTCCATATGGCATGCGT
TAATAACTACTTGGGGCCGGGGGCTGTTGAACCCATGGTCATGTGGTAGG
CGCAGCCTAGCCATCTGTGGATTCTTATTCCGAAAAAAATCAGTTACCTT
CAAGCCTTTGCATTTTTTTGTTGGAGAGAAAAAATTTCACCCTGCGGTAT
TTATCTGTAAAAAAACATGGCGAAGTAGTTGTTGTGACTACCGCAGCTGT
CACACTCTGAGGTATGTCACGTTGTACATCACCACATGAAACGGTGATGA
GATTTTATTGACTCCATTTCTGGAAAACGGCGCTCGTTTCATAAAAACTG
ATGTTGGAAAAATCTCACAAATATGTAAGTAGATGGACGCATGTACTCTT
GCATCTCGAACAAGCTAGGCGTGGAAAAAGGTCGTCGTCCGGGATGTTGT
TCCACGTGATATATCCTGCAGATTTGCAACAGCCCGAGACGTTGGCCACA
TCATACGCTAACCGCACACGCAGGATATTTTTCAGTGCGGAGAGATAGAT
AGAAGACCCCGCTAACCAAAATGTCTCGCATCTCTCCTTGTCTGTTGCTG
CACTGTCTATACTGTTTGCTGTCTGCATCAATGTTGTAGGTGTTGTCGGC
ATTCGAGACGCGCATGAACGATCGTGCGGAGGCGGACGTTGTGCGGCTCT
TGAACTCTTCAGGTAGCTCTGGCGGCAGCCACGGCAACTCGCCAACGAGG
TAAATTGCTTGGCAATCGTACAGTAGGCTGTTGTTCTTCTCGGCGATTCT
CCCCACAAGAAAAAATGCATCTACTCCGAAAATGCTCAGTCTCCACAGAT
ATATGTGAACAATATGGGGATTCTGGACGATGAGTGAGAGGTCGTTGTAT
TCTGTTGTACGTTGGCAACTCTTTAAAGGTTCCTTGTTCAAACCAATTTC
TTGCTTTAGTTTCCCTCTCTTTATTGTTGACATTGATGATGACGATTATG
AGGATGTTGATGGTGATTGTGATGATGTCGCTACTCCCACTCTGCCTTGA
CAGTTGTACGCCGTTCCGTTACGACCCGAACGACCTGAGCATGGAGGATG
ACGTAGGAGTATCGAACGTCGGTTCCGCCATCAAGAATCTGAATTTCTCC
AGAATAGCTTCAGCAGAAGACAGCGGCGACAGCACCTCGCGAGAGAAGAA
GCTACAGCACCACTACCGGCAACGGCAAAAGACGCTGGGTAGACATTCCC
CTGTCTCCTCTTCTAGCTTGGCGGGTGGAGGAATGAAGCTTGACGTCGCT
GGTAAATTGCTGAGACTGTACTGTCACGTTTTTTGCCGTTTCGAGGGCGT
GTATCTTGGATATAGTGCAGAGCGAGAGCGGGCAAGCAGTGACTTTTTCG
TAACGGTCAACTAATACACAAGCACTCCCCAGTACTAGCTGATTTGTTAG
TGGTCAGAAGTTCCCAGAGGGTTAAATCATCATCTACATTATTTTCCCTT
GGCTTTAGGCCACTTCTTATGGCACTTGGATAATTGAAAAAAAATAATTG
ATCTTTTCAATTCTCCAAGTGAAGAATATCCAATTCAAAAATAGAAGAAT
CATATCTTATGGGAAACTGTGATTTTTGAAGGTGTTCCAAACTTGGACAG
GCTGTAGCTGCTGCGAGGAGAACAGAGTAAAGTCATTATCCTCAATTTTG
GAAAGCGCGGGGAAAACGCCGGCTGTAGTCAGCAAACGAGAGAGAGGTCA
GCGGTAGGCACGATGTCAACATCTCCAGAGGGTGTCGTAATAGGGGGTGA
TGAACCCCAGTCTGAAATAGTGACCTGTGCAGCTGTGTTCGTGACCTGGA
CCAGGTTTGTTGTTGCTTGACACAACGCAAGTAACATCTCGTCCCTGTCG
TCGGACCAATCGAACACATCCTCATCCCCAGTAACTGGCACCATCATGGT
AGTGTGTGTGTACTGCGACAAGGGTAGCTTGTGTGTGAGGTGTGGCGAGG
GTGGCCTGTTGTACCTCACTGTCTGTTCTCTTGGGAAATCAGATAGGTAC
TGTTTTGTTTCCTTACGATGCTGCTGATGCTTTGAGCCATGCCTAGACGA
TGCCGCTCCCGCCTTCCGTCATGCTTTTCAGATGAAAATGATCCAAGTTC
CGAAAATCCCACTTGGGTAATTATTCATTTTCCGCCCCCGACGGAGCAAA
ATTTCGTCGCCTTGAATATTAAAGAAGAAAATGTTCGCTTTTTCCCCCAT
AAGAAGTGGTGAAGGGGATTTTTCACCTGGATAATTATAAATATCCACTT
TTTCAAAATGATCCAAGTCTCATAAAAAGTGGCCTTAATGATGAAAAAAA
GAAAGAAAAATAATCCATCTGTTTGACATCAAACTCTGCGCAACCCGGTG
CCAACACAAGTTCACACCATTGGAAAGGTAGATAGACAGCTGCTGCTTCC
GCTCTAGTTGTCAATATTAATAGCGACATCGATCGATATGGAGTAGAATC
AACACAAGTAGGCAAGTACGTGGGGCAAGTAACGATAGTAGTTTGCAGAC
CCTGGTTATATGATATGTTTATGCGTGTATCAGTATCAGTATCAATATCA
GTATCAAATGCTATTGATATAACTGCCACTGTTTGTGTATGCAACGCCCA
TTTTATTACCGTCGAAGCCACTAGTTTCTTCCTGGGCTTTCGCTGTTCAT
GCTACCTGCTTGCCTGTTTTGTATTGGATCGACGCCACCACGCTTTTTGG
AGAATGTCGATTGATGCCACTGTCGTGTCAGTATAAATGCTGACGTTGGC
CTCTGATGCCGCTCTTGGTTGAAGAGCTGTCTTTACTTGTGACCATGCTG
TATGTTGCTGGACTCATGATCGTAGCTACGAAGTTGCATATGCCGGTTCG
TGAAACAGCTCATGTAATTTTCCTCGAAAGCGCTAATTTATTGAACATGG
ATTATATGTATAATAGTAAGCAAATAGCTGAGTTGGAGGAGTTAAAATTA
TGTATTGCTTCTTTTTGCTTTGCGTGAATATCAGATGAGAATACCGCCGG
TTTCCTCGATCGATCTGGCGGCAGTGATGCGCTCTCTGGAGTGGTTTACA
GCGACGACGACAGTGATCTCAGCATCAGCGATATTGACGAAGGTGTTCTC
GCCAGTGAGTACTACTGCTTCTTAATTGAACTAACTGACAGGGAACGTAT
ATTCTGACGATGTACCTAGTCGATGCTGTCGGAGAGTGGGGTTTTGAAGG
CGGCATCAATGAACGGGCGTGTATACTTCGGATCCGTCGCACGAAGGCAC
ATAGCAGCATATTCTTCGATGAACCATTCTTGTACCTTCCTTCAACACGG
GAGAAAATACTGTACTGTGCTATTTTCCTGTGCAGTTTAGTGAGTAAACT
TGGAACGTGCTGGGAAGATTGTGCCTGTGCACGTTTTTAGAAGTTATCTC
TTGTTTTTTTTTCGAGGTGGGAACGAACAAAATAAACGCTTCTTATCTTG
CCGGCATCTTTCAATTAGAACGGTATGTAGACCCACTGTCGTTGATGGTG
TTGTCTGTTACCCCCCTCCATCGCTTCATTGTCGCCTTGCTGCCTCACTT
GGACTGAACAACCTAAACACTGCATGACCATTCTCACGCGCTACGTGTTT
AATCGTGTACGTCCCGGCTCGTTAAATCCGAGCACTGTGTGTACGTTTTT
CGGAACCGCTTCTAAATCAAAAGTTTCCCATGTTTTATGCAAAAGTGCAA
TGCCCGTGACACCAAGCGATGTGCTGTGGAGAGCATCTTGTCGAGATAGA
TGAACCTTTTCCTTGGAGTAAGTATCACGATACAGCGTAGTTCAAGTTTT
GTCGACAAAATTAATTTGACGAAACTTATCACCCGGGCCGATCAGGTGAT
CGACCGTGTAAGCTATGGCTCTTCCTTATCTCCGAGTGTTTTTGCAGGTG
GTTGTGCCCGATCTCAAATGTTACGAGCTGCGTGTTGAATGACCAGCGCG
TCCAGTCCAGGTTTTGCCGTCGTGGGCCAAACCCATGACCCGCATGCACC
AGGGTTTGTTGCGCTCGCATTTAGGCACAACGTCAGTGACACCCACCCAC
ACTACACAAAAATGCTGCGCAGTCGACTGGATGATTTTCTCCGTGTTCTC
CTTGAGTCATAGATGTGGAAAATCATAGCGTCTCAACTACCTGTTACTTG
TGGTACTACCCTGACTATATTGCTTCGCGCGTAGTGACTGGCGAAAAGTC
GTGCACGCCATTCATGCCCTCGTGCTGCCGCGAACGCTAACACCTATCTT
CCACCACATGACCGTTGATCGTCGTCTAATCATATTTTTTTATCTCGCTA
GGAGCCAAGGCATTCACAGATGAGGAGGAGGCTAGAAACGCGCGCATTAG
CAAGGAGCAGGACGCCAGCTCGTCTTCAGCCAGTGCCGGTTCCGACGCGA
AAGCGGAAGTATCCCAGGTGACTTGTTTACGTGCCGATGTCGGCCGAGGA
CATTCTAGCAACTGCGCTGATGACGTGAGCAATTTTCGTACTAGAAGTCT
GTACAGAGTATTTACTAATGCTAGCACTGCAGTCACGGTTACGAAGCTGC
AATTCGTCACTGTCGCCGTGTCCTTTTGGGCGAAACCCATCGTCAACGTA
TAGCGGCTCGTGGGCGCTGGGATGTAAATCGCCACGCTCGCAACGATTCG
TATTGGATGTAACTGGAGGGACGTTTTGAAATGACAAGGGCGACCTATGC
TATGCCACATGACAGTCTTGTAAAGTCAATATGGGAACAGTTGTAGAAAC
AGCCTTATCAACTGTTACACTCGTCATGTGAGCAGATGTCGGCAGGGAAG
GAGGAGGAAACGAAGCAGGTTGCGGAAGAGGGGAGGGAGAACAAGGGGAC
AACCATGCCCCCCCCGGACTCGCAGCCATCTGGAAGCGGACAGAGGAAGG
GTACCCCCCACCCCAAGAATGTAAGTGCGGCAATGTCCACTGTTTTCACT
CGAGCATTGATACAAATCGCTGTCGACCTATCTGCCCTGACAATGTGGCG
GACAAGCCGGGATTCTTCATCAGGAAAATTTCGTGGATCCTACCCGAAGC
AATCAAGCATGCATACGATCAAGCGAGAAGACGTCAATTGGTCATGGATT
ACTCTTGACTTCTTGAGAACCGATTCTGCCACGTTGATAGTTCCCCTATT
TATCGTTTTTTCTCTCTCTTTTTCTATTGTTGAATATGAACCTTGCAGAG
GAGCTCCACGGACGAGGACGAGAAGGGCGATGGCGGCAGTTTTTTGGCGC
AGGTATCGATCATTCAGCAATACAACTGATAACCCTCCTTTACTATATAT
GTACTGCATATTTTTTGGGTAGATAGCCGGTGATCAAACGTGCACGGATC
GTGGAGATCGAATACATGATCCGTGGACAAAGATGTACAGATGGTGTGGA
AATGGTACTGATCCGTGTGGCTGAAGAAAAACTGACAGGGGTGGCCGGAG
TATGGTTCTAATCAGATGTGTCGTGCGAACCACCCGTGGACAACCATTTG
CTAATGAGTATGTTGTCTACGACATGACGAATAACCGAGATCGCTCCTAC
CCGCGTTGGGTTTGCTTTGTATGTTGTGCTCGTACTCCTTTATAGGAATG
AATCGCCTGCTGTCATACAATTTGGATTCGGATATCCCTCGGTTTGCTCT
CGCCTTCACGCAGTACCCAATAGTGCGGGCAAGCTCTTTCATTGGTTGAG
GGCCCCGATGAAGTGACATCTATTGATGAGGCATTTCTCACCCCATTCGA
AACGAATGAGTACTTGTCTACATGGTCATACGCGGCGCGAGATTAAGATC
GCCACTTGGCTGCATTTTGGTTCCTTGCGAAATGTGTAGGTTTAACCGCC
TGCCTGTTCGTTCAGTTTTAGCCGTTTGTTTGTTGACCCTGCCGTTCTCG
ACGAAATTACAAGTGGACAAAGGTATCTGAATTGCTAGTAACGGCACGCT
AGCGTAATTCCTCGTTCTCTGTCTTTCTTTCATGTGCATAACCGGCAATC
AGGAAACGTCACTAATGAGGGGGAAAATGACCAAAGAAGCCAGAACGTCT
AGTTTTACGCGTTCGTCTAGGGCAAAACAAATATGTTATATGCTATGGAT
CGACGTACTCTTTGGCGTGGAAGGATGACACAACCGAAAGGGTATGCTGA
CCCCCCCCCCCCACGCTATGTATATTCGGGTTTCCTGATATCATGATGTG
GTCATTCAGGTGGAGTCCAAGGACAAGGATGGTAAGCGGACACTTACGCC
CGTCAGGAGGTAAGAGCAATAATACCACTCATCGTATCACGATACGATGA
AGGTAATTTATTTGCTATCTATTCTTACGGTTATGCCTTGTCTCAACCGT
TGTTACCCTTAATTTACACGCGATAGATGTGGTACGACACTTTCGTGCTA
TGGAGAGTTTGACGGGCGACGTTCGTCGGTCACAACGTTTAGCTTGCTTA
GGTGGCTACTCTGGTGTCGTCTTAGATGCCGTATCATGGCGGGCTGAACA
AGATTATCAGAGAATCGCCTAAACCTTGAACATTTCTTGCTGCGTCACCT
AGGCAACATGATTGGAAGGCACCAACGTAAATCTGGTACATGTCTTGGAT
GCATCCGAAATCAAGTTGTACACTAACCTTGTTGTGCAATAATGGCACTA
TCACCGTTGATGTGGGTCTCCTGTATCAACAAGTCTAACAACTAGTAAAT
TTTCCCTGTATGTACACGAGACTTTTTACAGGAGTGATTTTAAAGACCAT
TCGTGTTAGTCTAATGAAAAGAACAGGCACAATACAATTCTAATACGTCC
ATATGGTAGCTAATAATTATGTTCTTTGGTTGAACAATTTCGGTCTCTCA
CGTTCGTGCTGGATCTATGCCTTTCATAATTGTTTTGCGGAAAATCTGTA
TTGCATACATGGAGTGTGCTAGCAAAAAAGGAGTCAGACGGCACTAAGAA
TAACAGTTTCCACGCCGATTAGAAACGGCCATGCGTAGGTACAAGTCAAG
CTGGCGTTCAAATATTGTTGTCAAACCGTTCATTGACGCGTCAAATAAGC
AGGTCCAGGCGATTCAACACGGCGAAGGAACCCACACCGTCGCCCTTAAG
GAAGGAAATGGAAGCCCTGCTCTGATGAACGTGATGAGAGATTCAATCGT
TTTGGCCCGGTGTTGTCGATTGGATCGTGCTGTTGACTTGGCCCGACGAA
AAGAAAAAATAAAGTCAAGAGATGTATACAGTACGGACCACGTGTCTGGA
CAATGATTACTGCGTTCGTGGGCAAATCAAAGCGCACGGGGGGGGCGGGG
TACAGATAGAATTGAAAGGCAACAGCGTTATCGCCGCGCGGTAGTTGTTT
TTGTGCAGATTGCTGGGCGGACGGATATCACTACAGCAGTAGTAACAGAG
ATCTCCATGTGCTAGTCTCATTCTGTCATTTCTTTACGGTAAGCTGACAT
GTACAAGGCCAGTTGGAGAGACGAGAAAGGGCGAAGATGCCTCTAGGGTC
TCGGAGTGTTTGATGCACATTTTTTTCTTCTCGAGCCGTTTCTTTTCCCC
ATGTACACTGATCTTCGTACTGGAGAGGATTAACAGGCAATATATGCGTC
GCCTATTACTGTCGGCTTAACGTGAGATCAGCCTTTTATTTACCGGAGTT
GTAATATGGGATGGATCGAGGCCTTTTATTTGTTTTCGAGGGTTGGGAAT
ATTTGCGTGCAAGGCAGGATGATTGGATGATTAGCCCTGGCGTTTGACAA
CCACTTGAAGTTAGGACAGCTGTCCGCATTTACTGTCACATGATTATTTT
CAAGGGGAATACAGCAGGAATATGAAATAGTGTAGGTTGGGTGGGTCAGC
AAGATAGTCGCATCCAGCGGAAATTGCGACCAGCTGTGTTGCTCGCACTG
CGGGACAGGACGAGTGTACCACTCGCAGGGGGTACAGTGTAGGATGATAC
ATATGATGGCATTGTGATGCATGATGTATACTGTTTGATGTATGGAGAAT
ACCGTTGCATTTCTGGCCGTGAGGAGATCTTAGCTTCACCTTGTACGCAG
GAGGAGGAAAGTTCACCTCAAGAGTCCAATCAATTATATGTACAGTAGAT
GCTAGTTTCTACACTCTTTTTTCCCCGATGCGGAGCAACTCACTCTCCTC
TTGATAGTTGAAATCGATTTCGAAGCCTACGAAAGTACCAGGTGCAGACA
GAGTTGAGCTCTTGCTAGTCGGCGAAACTGGTTGCCTCAAGGTAGATGCT
GATCAGAC

Coding sequence (CDS) from alignment at H-paniculata_contig2555:6285..17442+

>mRNA_H-paniculata_contig2555.6956.1 ID=mRNA_H-paniculata_contig2555.6956.1|Name=mRNA_H-paniculata_contig2555.6956.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3534bp|location=Sequence derived from alignment at H-paniculata_contig2555:6285..17442+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACACCATAAGCAGCGATGCGGGTCTCTCGCGAAAAGAAATGCTGAA
AAAGTGGCGAGCGCAGAGAGAAGCGGGGGCGGCGCTAATCTCTAAGTCCA
TCAACAAGTCAGAGAATCCAGCGGGTGCAAGCGCGAGGTCACAACAGTCA
GGCAAGGAGAGCAGGCACACTGGCGCGCTTGCGGAGAGATGTGCAAACAC
CAACAGGACTTACAAAAAGCCTGCATCACGCTCTAAGAAAGGAGCAGTTA
AGCGTAAGCCATTTCAGATGAACACCATAAGCAGCGATGCGGGTCTCTCG
CGAAAAGAAATGCTGAAAAAGTGGCGAGCGCAGAGAGAAGCGGGGGCGGC
GCTAATCTCTAAGTCCATCAACAAGTCAGAGAATCCAGCGGGTGCAAGCG
CGAGGTCACAACAGTCAGGCAAGGAGAGCAGGCACACTGGCGCGCTTGCG
GAGAGATGTGCAAACACCAACAGGACTTACAAAAAGCCTGCATCACGCTC
TAAGAAAGGAGCAGTTAAGCGTAAGCCATTTCAGGTGGATGCAAGCGTGG
TGCGTGAGGCAAGCGAGCGCCGAGTTGCCCCAGGCACTCCAATCAACATG
CTTAAGAAACGCATTAAGCGCGCGGCAGCAGCGGCAGCGGCGGCGGCGGC
GGGCGTCCCTGCTCAATCCACCGCTGGTGGCCAGCACGGTGGTAGCTTTA
GACCAACAGTTGGCGCAAAGGCGACCGTGGCAGCGACTGGGGGGGGAAGG
ACACAGGTTGGCGGTGGTACCGTCTACGTCAGCAAAGGGCTGAGTCGCGC
TGCCCGGACGAAGCACGGTAATGTTGGCGGTGCTTCGAGTCACATTTTGG
ATGCTGCCCGGATGAAGAAGGTCTCGGAATATCTCAAAAGCCAAATCAGC
GAGGCAAACATGCTTTTGGAGGTGGATGCAAGCGTGGTGCGTGAGGCAAG
CGAGCGCCGAGTTGCCCCAGGCACTCCAATCAACATGCTTAAGAAACGCA
TTAAGCGCGCGGCAGCAGCGGCAGCGGCGGCGGCGGCGGGCGTCCCTGCT
CAATCCACCGCTGGTGGCCAGCACGGTGGTAGCTTTAGACCAACAGTTGG
CGCAAAGGCGACCGTGGCAGCGACTGGGGGGGGAAGGACACAGGTTGGCG
GTGGTACCGTCTACGTCAGCAAAGGGCTGAGTCGCGCTGCCCGGACGAAG
CACGGTAATGTTGGCGGTGCTTCGAGTCACATTTTGGATGCTGCCCGGAT
GAAGAAGGTCTCGGAATATCTCAAAAGCCAAATCAGCGAGGCAAACATGC
TTTTGGAGATCGCTGGAGTGGACGCAGCTCGCACGCTCCTGGCAGATCTC
CTCTTTTGTACGGGCGATGGGAGGGGAGTCGGGGAGCTGGCACTATACTG
GGCTGCCCGTGCAAAGCTTGAAGAGATCGCTGGAGTGGACGCAGCTCGCA
CGCTCCTGGCAGATCTCCTCTTTTGTACGGGCGATGGGAGGGGAGTCGGG
GAGCTGGCACTATACTGGGCTGCCCGTGCAAAGCTTGAAGAGGATGCCGG
ATTCCACAGCGCGGCGAGAAGGACACTCGACGAGGGCCAGGCGTACATTT
CCATGCCCATGCAGCAGAAAGTTATGGAAAAGGATGCCGGATTCCACAGC
GCGGCGAGAAGGACACTCGACGAGGGCCAGGCGTACATTTCCATGCCCAT
GCAGCAGAAAGTTATGGAAAAGGTGTTGTCGGCATTCGAGACGCGCATGA
ACGATCGTGCGGAGGCGGACGTTGTGCGGCTCTTGAACTCTTCAGGTAGC
TCTGGCGGCAGCCACGGCAACTCGCCAACGAGGTGTTGTCGGCATTCGAG
ACGCGCATGAACGATCGTGCGGAGGCGGACGTTGTGCGGCTCTTGAACTC
TTCAGGTAGCTCTGGCGGCAGCCACGGCAACTCGCCAACGAGTTGTACGC
CGTTCCGTTACGACCCGAACGACCTGAGCATGGAGGATGACGTAGGAGTA
TCGAACGTCGGTTCCGCCATCAAGAATCTGAATTTCTCCAGAATAGCTTC
AGCAGAAGACAGCGGCGACAGCACCTCGCGAGAGAAGAAGCTACAGCACC
ACTACCGGCAACGGCAAAAGACGCTGGGTAGACATTCCCCTGTCTCCTCT
TCTAGCTTGGCGGGTGGAGGAATGAAGCTTGACGTCGCTGTTGTACGCCG
TTCCGTTACGACCCGAACGACCTGAGCATGGAGGATGACGTAGGAGTATC
GAACGTCGGTTCCGCCATCAAGAATCTGAATTTCTCCAGAATAGCTTCAG
CAGAAGACAGCGGCGACAGCACCTCGCGAGAGAAGAAGCTACAGCACCAC
TACCGGCAACGGCAAAAGACGCTGGGTAGACATTCCCCTGTCTCCTCTTC
TAGCTTGGCGGGTGGAGGAATGAAGCTTGACGTCGCTGATGAGAATACCG
CCGGTTTCCTCGATCGATCTGGCGGCAGTGATGCGCTCTCTGGAGTGGTT
TACAGCGACGACGACAGTGATCTCAGCATCAGCGATATTGACGAAGGTGT
TCTCGCCAATGAGAATACCGCCGGTTTCCTCGATCGATCTGGCGGCAGTG
ATGCGCTCTCTGGAGTGGTTTACAGCGACGACGACAGTGATCTCAGCATC
AGCGATATTGACGAAGGTGTTCTCGCCAGAGCCAAGGCATTCACAGATGA
GGAGGAGGCTAGAAACGCGCGCATTAGCAAGGAGCAGGACGCCAGCTCGT
CTTCAGCCAGTGCCGGTTCCGACGCGAAAGCGGAAGTATCCCAGGAGCCA
AGGCATTCACAGATGAGGAGGAGGCTAGAAACGCGCGCATTAGCAAGGAG
CAGGACGCCAGCTCGTCTTCAGCCAGTGCCGGTTCCGACGCGAAAGCGGA
AGTATCCCAGATGTCGGCAGGGAAGGAGGAGGAAACGAAGCAGGTTGCGG
AAGAGGGGAGGGAGAACAAGGGGACAACCATGCCCCCCCCGGACTCGCAG
CCATCTGGAAGCGGACAGAGGAAGGGTACCCCCCACCCCAAGAATATGTC
GGCAGGGAAGGAGGAGGAAACGAAGCAGGTTGCGGAAGAGGGGAGGGAGA
ACAAGGGGACAACCATGCCCCCCCCGGACTCGCAGCCATCTGGAAGCGGA
CAGAGGAAGGGTACCCCCCACCCCAAGAATAGGAGCTCCACGGACGAGGA
CGAGAAGGGCGATGGCGGCAGTTTTTTGGCGCAGAGGAGCTCCACGGACG
AGGACGAGAAGGGCGATGGCGGCAGTTTTTTGGCGCAGGTGGAGTCCAAG
GACAAGGATGGTAAGCGGACACTTACGCCCGTCAGGAGGTGGAGTCCAAG
GACAAGGATGGTAAGCGGACACTTACGCCCGTCAGGAGGTCCAGGCGATT
CAACACGGCGAAGGAACCCACACCGTCGCCCTTAAGGAAGGAAATGGAAG
CCCTGCTCTGAGTCCAGGCGATTCAACACGGCGAAGGAACCCACACCGTC
GCCCTTAAGGAAGGAAATGGAAGCCCTGCTCTGA