mRNA_H-paniculata_contig1107.695.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1107.695.1 vs. uniprot
Match: D7G4R3_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R3_ECTSI) HSP 1 Score: 290 bits (742), Expect = 1.060e-90 Identity = 145/162 (89.51%), Postives = 150/162 (92.59%), Query Frame = 3
Query: 366 MEQGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDQDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKAVDDPTTSMMRNVPGSTSITPGSVNRNAEVWSKEPACCGLCACFSAN 851
ME GGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVD DDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESK +DPT SMMRN GS +TPG+ R+A+ WSKEPACCGLCACFSAN
Sbjct: 1 MESGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDPTASMMRNAQGSIPVTPGTATRSADAWSKEPACCGLCACFSAN 162
BLAST of mRNA_H-paniculata_contig1107.695.1 vs. uniprot
Match: A0A835ZL19_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL19_9STRA) HSP 1 Score: 184 bits (466), Expect = 8.790e-51 Identity = 92/157 (58.60%), Postives = 119/157 (75.80%), Query Frame = 3
Query: 381 SPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDQDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKAVDDPTTSMMRNVPGSTSITPGSVNRNAEVWSKEPACCGLCACFSAN 851
SPPQ+SGYL KKAKTGKWQ+RWFETNAH+LTYYK++K+EKLLAALNLPQVGEIRL+D+D +E+N+G+LF+IELN R+Y M+A++REEAARWVEVLK LQ ++ E+S+ + P +M+R P + W K+ C GLC CF A+
Sbjct: 6 SPPQMSGYLYKKAKTGKWQRRWFETNAHFLTYYKTRKVEKLLAALNLPQVGEIRLMDEDPS--DEENNGALFSIELNTRIYVMRAASREEAARWVEVLKALQALDAEDSRGHESPHAAMVR--------APDGIGSGEGYWKKDDKCFGLCGCFQAS 152
BLAST of mRNA_H-paniculata_contig1107.695.1 vs. uniprot
Match: A0A836CJC0_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC0_9STRA) HSP 1 Score: 173 bits (439), Expect = 5.710e-47 Identity = 96/158 (60.76%), Postives = 117/158 (74.05%), Query Frame = 3
Query: 381 SPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDQDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESK--AVDDPTTSMMRNVPGSTSITPGSVNRNAEVWSKEPACCGLCACFSA 848
+PPQ+SGYL KKAKTGKWQ+RWFETNAH+LTYYK++K+EKLLAALNLPQVGEI+LVD D E N+G+LFTIELN RVYTMKA TREEAARWVEVLK LQ M+ ++++ + P S++R G+ + P S W K+ CCG CF A
Sbjct: 7 APPQMSGYLHKKAKTGKWQRRWFETNAHFLTYYKTRKVEKLLAALNLPQVGEIKLVDPDPNDPE--NNGALFTIELNTRVYTMKAGTREEAARWVEVLKALQAMDVDDARHAGAESPHASIVRTGEGTDAPGPDS------YWRKDSKCCG---CFRA 153
BLAST of mRNA_H-paniculata_contig1107.695.1 vs. uniprot
Match: A0A4D9CUK8_9STRA (PH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUK8_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.110e-29 Identity = 78/157 (49.68%), Postives = 94/157 (59.87%), Query Frame = 3
Query: 375 GGSPP----QISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDQDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKAVDDPTTSMMRNVPGSTSITPGSVNRNAEVWSKEPACCGLC 833
GG+ P +SGYL KK + G+WQKRWFETN +LTYYKSKKM KLLAAL+L QVG I+L + + EED GSLF+IELN+RVYT+KA EAA+WVEVL L+ D T V S I G W K+ CCG+C
Sbjct: 7 GGTVPGDVVMVSGYLHKKTRDGRWQKRWFETNGCFLTYYKSKKMTKLLAALDLVQVGTIKLTEVPEPGDEEDL-GSLFSIELNERVYTLKAGNDVEAAKWVEVLNQLKV------GGSDVMPTCAGNTVTSSMEIEAGG---GETEWKKKLQCCGIC 153
BLAST of mRNA_H-paniculata_contig1107.695.1 vs. uniprot
Match: A0A6U4KSE8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KSE8_9STRA) HSP 1 Score: 122 bits (307), Expect = 8.600e-29 Identity = 62/99 (62.63%), Postives = 79/99 (79.80%), Query Frame = 3
Query: 393 ISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDQDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQT 689
I GYL K+ K +WQKRWFETN +LTYYKS+KM+K+LAALNLPQVGEI+L+ + + + DNDG+LFTIEL RVYT++A R+ AA+WVEVL L+T
Sbjct: 25 IQGYLHKRTKDMRWQKRWFETNGCFLTYYKSRKMDKILAALNLPQVGEIKLLPES--AADPDNDGTLFTIELKARVYTLRAPNRKNAAKWVEVLNELKT 121
BLAST of mRNA_H-paniculata_contig1107.695.1 vs. uniprot
Match: A0A7S2WTC5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTC5_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.360e-26 Identity = 66/127 (51.97%), Postives = 86/127 (67.72%), Query Frame = 3
Query: 309 AAGPSILSTSHQLQTKNGTMEQGGSPPQI--SGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDQDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVL 683
A P +++++ + E S QI GYLQKK + G+WQKRWFETN +LTYYK+KKM KLLAALNLPQVGEI+L+D S + D+ G+LF+I LNDR Y +KA+ RE+A WV L +L
Sbjct: 16 AEEPQDFPAGKAVKSRSDSFEASSSADQIYIHGYLQKKTRDGRWQKRWFETNGCFLTYYKNKKMAKLLAALNLPQVGEIKLLDTG-HSDDVDSSGALFSIALNDREYMLKAAKREDAEVWVTKLNLL 141
BLAST of mRNA_H-paniculata_contig1107.695.1 vs. uniprot
Match: A0A482RVG4_9ARCH (PH domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVG4_9ARCH) HSP 1 Score: 110 bits (274), Expect = 6.280e-25 Identity = 60/99 (60.61%), Postives = 73/99 (73.74%), Query Frame = 3
Query: 393 ISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLV--DQDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVL 683
ISGYL K+ + G+WQKRWFETN YLTYYKS+KMEKLLAAL+LPQVGEI++V +QD E E LF+IELN RVY ++A + EA +WV L L
Sbjct: 9 ISGYLYKRTRDGRWQKRWFETNGVYLTYYKSRKMEKLLAALSLPQVGEIKVVLPEQDAEKQE-----GLFSIELNTRVYILRAKSSAEADQWVSTLNKL 102
BLAST of mRNA_H-paniculata_contig1107.695.1 vs. uniprot
Match: A0A7S2G8J6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8J6_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.460e-24 Identity = 62/121 (51.24%), Postives = 81/121 (66.94%), Query Frame = 3
Query: 312 AGPSILSTSHQLQTKNGTMEQGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDQDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVL 674
AGPS+ S S G GYLQKK K+G+WQ+RWFETN +LTYYK+KKM KLLAA+NLPQVG+I +++ D E+ ++ DG F+I+LN R Y +KA+ EEA WV+VL
Sbjct: 16 AGPSVGSHS-------------GDDGYKCGYLQKKTKSGQWQRRWFETNGVFLTYYKNKKMSKLLAAVNLPQVGDIAVMEPDAEN-DDTVDGGCFSIQLNSREYILKAADHEEALAWVKVL 122
BLAST of mRNA_H-paniculata_contig1107.695.1 vs. uniprot
Match: A0A7S2DE48_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DE48_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.690e-24 Identity = 61/116 (52.59%), Postives = 80/116 (68.97%), Query Frame = 3
Query: 363 TMEQGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDQDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESK 710
T + G P +GYLQKK K GKWQKRWFETN +LTYYK++KM+KLLAA+ LP+VGEI L+D ++ + G LF+I+LN R Y +KA + EA WV K+L ++E ESK
Sbjct: 4 TEPKSGKEPYKNGYLQKKTKQGKWQKRWFETNGIFLTYYKNQKMKKLLAAVKLPEVGEISLIDPHPDNDDTVEPG-LFSIQLNSREYILKAESHPEAVEWV---KILTKLKESESK 115
BLAST of mRNA_H-paniculata_contig1107.695.1 vs. uniprot
Match: A0A1W0A4A7_9STRA (PH domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4A7_9STRA) HSP 1 Score: 108 bits (270), Expect = 9.030e-24 Identity = 60/95 (63.16%), Postives = 73/95 (76.84%), Query Frame = 3
Query: 390 QISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDQDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVL 674
++ GYL KK + GKWQKRWFETN +LTYYK K+ +KLLAALNLPQVGEI L+ ++ E D G LFTIELNDR+YT+KA +E+AA WVE L
Sbjct: 5 ELRGYLLKKTRNGKWQKRWFETNRCFLTYYK-KQGQKLLAALNLPQVGEITLLPENTE----DGPG-LFTIELNDRIYTIKAKNQEDAALWVEAL 93 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1107.695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1107.695.1 >prot_H-paniculata_contig1107.695.1 ID=prot_H-paniculata_contig1107.695.1|Name=mRNA_H-paniculata_contig1107.695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=163bp MEQGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALback to top mRNA from alignment at H-paniculata_contig1107:18286..28596+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1107.695.1 ID=mRNA_H-paniculata_contig1107.695.1|Name=mRNA_H-paniculata_contig1107.695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10311bp|location=Sequence derived from alignment at H-paniculata_contig1107:18286..28596+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1107:18286..28596+ >mRNA_H-paniculata_contig1107.695.1 ID=mRNA_H-paniculata_contig1107.695.1|Name=mRNA_H-paniculata_contig1107.695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at H-paniculata_contig1107:18286..28596+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |