mRNA_H-paniculata_contig25520.6950.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25520.6950.1 vs. uniprot
Match: D7FS91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS91_ECTSI) HSP 1 Score: 152 bits (385), Expect = 1.190e-44 Identity = 70/76 (92.11%), Postives = 76/76 (100.00%), Query Frame = 1
Query: 1 MVQYYGDRTYARFYALETIARVPYFGYLCVLHLYETLGQWRKAEYLKVHFAESYNELHHLLIMEELGGNLLFKDRY 228
MVQYYG+RTYARFYALETIARVPYFGYLCVLHLYETLG+WR+AEYLKVHFAESYNELHHLLIMEELGGN+LF+DR+
Sbjct: 97 MVQYYGERTYARFYALETIARVPYFGYLCVLHLYETLGKWRQAEYLKVHFAESYNELHHLLIMEELGGNVLFRDRW 172
BLAST of mRNA_H-paniculata_contig25520.6950.1 vs. uniprot
Match: A0A835Z1V4_9STRA (Putative alternative oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V4_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.860e-35 Identity = 61/74 (82.43%), Postives = 66/74 (89.19%), Query Frame = 1
Query: 10 YYGDRTYARFYALETIARVPYFGYLCVLHLYETLGQWRKAEYLKVHFAESYNELHHLLIMEELGGNLLFKDRYL 231
YYG R YARFYALETIARVPYF YL VLHLYETLG WR+A+YLK+HFAES+NELHHLLIMEELGGN F DR+L
Sbjct: 38 YYGQRDYARFYALETIARVPYFSYLSVLHLYETLGWWRQADYLKIHFAESWNELHHLLIMEELGGNDKFFDRWL 111
BLAST of mRNA_H-paniculata_contig25520.6950.1 vs. uniprot
Match: A0A7S2LGX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LGX7_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.830e-34 Identity = 59/71 (83.10%), Postives = 65/71 (91.55%), Query Frame = 1
Query: 19 DRTYARFYALETIARVPYFGYLCVLHLYETLGQWRKAEYLKVHFAESYNELHHLLIMEELGGNLLFKDRYL 231
DR YARFYALETIARVPYF YL VLHLYETLG+WR+A+YLK+HFAES+NELHHLLIMEELGGN F DR+L
Sbjct: 93 DRAYARFYALETIARVPYFSYLSVLHLYETLGRWRRAKYLKLHFAESWNELHHLLIMEELGGNDRFLDRFL 163
BLAST of mRNA_H-paniculata_contig25520.6950.1 vs. uniprot
Match: A0A7S2UN98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UN98_9STRA) HSP 1 Score: 127 bits (319), Expect = 4.290e-34 Identity = 57/70 (81.43%), Postives = 66/70 (94.29%), Query Frame = 1
Query: 19 DRTYARFYALETIARVPYFGYLCVLHLYETLGQWRKAEYLKVHFAESYNELHHLLIMEELGGNLLFKDRY 228
DR+YARFYALETIAR+PYF YL VLHLYETLG+WR+AEY+K+HFAES+NELHHLLIMEELGGN F+DR+
Sbjct: 136 DRSYARFYALETIARMPYFSYLSVLHLYETLGKWRRAEYMKIHFAESWNELHHLLIMEELGGNARFQDRF 205
BLAST of mRNA_H-paniculata_contig25520.6950.1 vs. uniprot
Match: A0A0S3UCX6_9CYAN (Alternative oxidase n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A0S3UCX6_9CYAN) HSP 1 Score: 123 bits (309), Expect = 1.570e-33 Identity = 57/72 (79.17%), Postives = 65/72 (90.28%), Query Frame = 1
Query: 13 YGDRTYARFYALETIARVPYFGYLCVLHLYETLGQWRKAEYLKVHFAESYNELHHLLIMEELGGNLLFKDRY 228
YG+R+YARFY LETIARVPYF YL VLHLYETLG WRKA++LKVHFAE++NELHHLLIME LGGN L+ DR+
Sbjct: 20 YGNRSYARFYVLETIARVPYFSYLSVLHLYETLGYWRKADWLKVHFAETWNELHHLLIMESLGGNRLWIDRF 91
BLAST of mRNA_H-paniculata_contig25520.6950.1 vs. uniprot
Match: K0SXL9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SXL9_THAOC) HSP 1 Score: 124 bits (310), Expect = 2.430e-33 Identity = 58/71 (81.69%), Postives = 65/71 (91.55%), Query Frame = 1
Query: 19 DRTYARFYALETIARVPYFGYLCVLHLYETLGQWRKAEYLKVHFAESYNELHHLLIMEELGGNLLFKDRYL 231
DR YARFYALETIARVPYF YL VLHLYETLG+WR+A+YLK+HFAES+NELHHLLIMEELGG+ F DR+L
Sbjct: 64 DRAYARFYALETIARVPYFSYLSVLHLYETLGKWRRAKYLKLHFAESWNELHHLLIMEELGGSERFLDRFL 134
BLAST of mRNA_H-paniculata_contig25520.6950.1 vs. uniprot
Match: A0A098THC8_9CYAN (Plastoquinol terminal oxidase n=2 Tax=Neosynechococcus TaxID=1501143 RepID=A0A098THC8_9CYAN) HSP 1 Score: 122 bits (306), Expect = 4.330e-33 Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = 1
Query: 13 YGDRTYARFYALETIARVPYFGYLCVLHLYETLGQWRKAEYLKVHFAESYNELHHLLIMEELGGNLLFKDRYL 231
YG+R+YARFY LETIARVPYF YL VLHLYETLG WRKA+ LKVHFAE++NELHHLLIME LGGN L+ DR++
Sbjct: 17 YGNRSYARFYVLETIARVPYFSYLSVLHLYETLGFWRKADLLKVHFAETWNELHHLLIMESLGGNRLWGDRFI 89
BLAST of mRNA_H-paniculata_contig25520.6950.1 vs. uniprot
Match: UPI001F554B9B (plastoquinol terminal oxidase n=5 Tax=Nostocaceae TaxID=1162 RepID=UPI001F554B9B) HSP 1 Score: 120 bits (300), Expect = 3.640e-32 Identity = 56/73 (76.71%), Postives = 64/73 (87.67%), Query Frame = 1
Query: 13 YGDRTYARFYALETIARVPYFGYLCVLHLYETLGQWRKAEYLKVHFAESYNELHHLLIMEELGGNLLFKDRYL 231
YG+R+YARFY LETIARVPYF YL VLHLYETLG WR+A+ LKVHFAE++NELHHLLIME LGGN + DR+L
Sbjct: 20 YGNRSYARFYVLETIARVPYFSYLSVLHLYETLGFWRRADLLKVHFAETWNELHHLLIMESLGGNRYWGDRFL 92
BLAST of mRNA_H-paniculata_contig25520.6950.1 vs. uniprot
Match: C5YA16_SORBI (Ubiquinol oxidase n=1 Tax=Sorghum bicolor TaxID=4558 RepID=C5YA16_SORBI) HSP 1 Score: 120 bits (301), Expect = 3.710e-32 Identity = 54/73 (73.97%), Postives = 64/73 (87.67%), Query Frame = 1
Query: 13 YGDRTYARFYALETIARVPYFGYLCVLHLYETLGQWRKAEYLKVHFAESYNELHHLLIMEELGGNLLFKDRYL 231
Y DR YARF+ LETIARVPYFG++ VLHLYET G WR+A+Y+KVHFA+S+NE HHLLIMEELGGN L+ DR+L
Sbjct: 19 YRDRNYARFFVLETIARVPYFGFISVLHLYETFGWWRRADYIKVHFAQSWNEFHHLLIMEELGGNALWIDRFL 91
BLAST of mRNA_H-paniculata_contig25520.6950.1 vs. uniprot
Match: UPI001D13DFD3 (plastoquinol terminal oxidase n=2 Tax=Tychonema TaxID=54312 RepID=UPI001D13DFD3) HSP 1 Score: 119 bits (299), Expect = 5.020e-32 Identity = 56/73 (76.71%), Postives = 64/73 (87.67%), Query Frame = 1
Query: 13 YGDRTYARFYALETIARVPYFGYLCVLHLYETLGQWRKAEYLKVHFAESYNELHHLLIMEELGGNLLFKDRYL 231
YG+R+Y RFY LETIARVPYF YL VLHLYETLG WRKA+ LKVHFAES+NELHHLLIME LGG+ L+ DR++
Sbjct: 20 YGNRSYPRFYMLETIARVPYFSYLSVLHLYETLGYWRKADLLKVHFAESWNELHHLLIMESLGGDRLWIDRFI 92 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25520.6950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25520.6950.1 >prot_H-paniculata_contig25520.6950.1 ID=prot_H-paniculata_contig25520.6950.1|Name=mRNA_H-paniculata_contig25520.6950.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp MVQYYGDRTYARFYALETIARVPYFGYLCVLHLYETLGQWRKAEYLKVHFback to top mRNA from alignment at H-paniculata_contig25520:813..1333- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25520.6950.1 ID=mRNA_H-paniculata_contig25520.6950.1|Name=mRNA_H-paniculata_contig25520.6950.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=521bp|location=Sequence derived from alignment at H-paniculata_contig25520:813..1333- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25520:813..1333- >mRNA_H-paniculata_contig25520.6950.1 ID=mRNA_H-paniculata_contig25520.6950.1|Name=mRNA_H-paniculata_contig25520.6950.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at H-paniculata_contig25520:813..1333- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |