mRNA_H-paniculata_contig25498.6944.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25498.6944.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 306 bits (785), Expect = 6.740e-96 Identity = 173/467 (37.04%), Postives = 264/467 (56.53%), Query Frame = 1
Query: 1 IRTKWIFKRKLKDDGSVARYKTRLVAQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEDMDVDAAYSNAPVEEELYIP----------FVRHLRKSLYGLKLSGRNWNNTLDDFLVGMGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRRE-KVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDRTISQGSYIREVQKRYGFDECRGVT-PCA---------GVQESTRGRSGNSTEYRGMVGLLMYASTGTRPDIAYEVHQAAHRMENPCREDFSTCKRIFRYLSTVPDFDITFGGKSNGHGLEGFVYANWAEDVEDRKSTTGYVFNLNGGAMSWCNKFSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGEQYADILTKELSRVNF 1338
I+TKW+F +K + G + R+K RLVA GF Q+ G D FET A VA M ++R S+ + LE +DVD A+ NA ++E++YI V L K+LYGLK +G W T+ L+ +G +D+C+Y R GG+T + +YVDD+V+ GR + +VDE K I+ RFRIK+LG + +LG+E+ D +I+Q Y++ + +R+ CR VT PC G ++ + + YR ++G L Y + TRPDIA+ V + MENP ++ R+ RYL + D+ I++GG + F A+W V+DR+S +G V +NGG + + K+ Q V SS+EAEY+A G+E +++R +L +G + ++EDN+ AI L+ +G H RTKHI +R H +R+ + + V+ L YV+T Q ADILTK L F
Sbjct: 38 IKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGR-AGGDTTY-ICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKY---QSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDIRHHYVRDLVADSVIKLSYVETQRQLADILTKSLGTKRF 499
BLAST of mRNA_H-paniculata_contig25498.6944.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 311 bits (798), Expect = 1.090e-95 Identity = 178/464 (38.36%), Postives = 269/464 (57.97%), Query Frame = 1
Query: 1 IRTKWIFKRKLKDDGSVARYKTRLVAQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEDMDVDAAYSNAPVEEELYIP------------FVRHLRKSLYGLKLSGRNWNNTLDDFLVGMGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRRE-KVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDRTISQGSYIREVQKRYGFDECRGVTPCAGVQESTRGRSGNS-----TEYRGMVGLLMYASTGTRPDIAYEVHQAAHRMENPCREDFSTCKRIFRYLSTVPDFDITFGGKSNGHGLEGFVYANWAEDVEDRKSTTGYVFNLNGGAMSWCNKFSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGEQYADILTKELSRVNF 1338
+ +KW+F+ K DG+V +K RLVAQGFSQ G+D ET + VAR ++RT +LAA+H +L MDV A+ N ++EE+Y+ V LR+S+YGLK S R WN+ LD L MG ++T D C+Y ++EGGE ++AVYVDD+++AG+ + K++E K ++++F++KD+G L LG++V + + I Q +Y + V +R+G + + + + + +S Y+ VG L+Y ST TRPDIAY V A +P E + KRI RYL+ D + + G G+ A+WA D++DRKST+GYVF ++ A+SW +K KQ V S+ EAEY+A A +E V+L++LL + G + EDN++AI ++K + H R KHI +++H IRE + + L+Y T E ADI TK LS V F
Sbjct: 26 VGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKEHLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSK---KQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQF 484
BLAST of mRNA_H-paniculata_contig25498.6944.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT) HSP 1 Score: 304 bits (778), Expect = 1.590e-94 Identity = 180/473 (38.05%), Postives = 264/473 (55.81%), Query Frame = 1
Query: 1 IRTKWIFKRKLKDDGSVARYKTRLVAQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEDMDVDAAYSNAPVEEELYIP------------FVRHLRKSLYGLKLSGRNWNNTLDDFLVGMGLDRSTTDSCLY---FSRDEGGETNLLVAVYVDDLV-IAGRREKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDRTISQGSYIREVQKRYGFDECRGVTPCAGVQESTRGRSGNSTE------YRGMVGLLMYASTGTRPDIAYEVHQAAHRMENPCREDFSTCKRIFRYLSTVPDFDITF----GGKSNGHGLEGFVYANWAEDVEDRKSTTGYVFNLNGGAMSWCNKFSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGEQYADILTKELSRVNFR 1341
I +KW+ K K DG+V R+K RLVAQG+SQ G + E + VAR S++RT +LA +H+ E+ MDV A+ N +E ++Y+ +V L+KSLYGLK S R WN TLD FL G +S D+C+Y D G + +++AVYVDD++ I+ ++ K + + F + D G + +LG+ ++RD ISQ Y+ V R+G C+ P + E+T + E Y+ +G L Y ST TRPDI+ V + M NP +E ++ KR+ RY+ +F + F NG L G+ ANWA DV+ R+ST+GYVF + +SWC+K KQ VT S+TEAEYVA +A +E +++R LL IG TT++EDN+ AI +SK + H RTKHI VR+H +RE + + + Y T ADI+TK L++ F+
Sbjct: 58 IGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCK---PISTPLETTYHKRTEEEEGFDKNLYQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSK---KQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQ 524
BLAST of mRNA_H-paniculata_contig25498.6944.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 304 bits (778), Expect = 2.400e-94 Identity = 183/464 (39.44%), Postives = 259/464 (55.82%), Query Frame = 1
Query: 13 WIFKRKLKDDGSVARYKTRLVAQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEDMDVDAAYSNAPVEEELYIPF------------VRHLRKSLYGLKLSGRNWNNTLDDFLVGMGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRREKVDEFKH---NISQRFRIKDLGSLSRVLGIEVRRDHPNGDRTISQGSYIREVQKRYGFDECRGVTPCAGVQESTRGRSGNSTE----------YRGMVGLLMYASTGTRPDIAYEVHQAAHRMENPCREDFSTCKRIFRYLSTVPDFDITFGGKSNGHGLEGFVYANWAEDVEDRKSTTGYVFNLNGGAMSWCNKFSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGEQYADILTKELSR 1329
W+FK K G++A+YK RLVAQGFSQ+ G D +T A VA++S++R +LAA D+EL MDV AY N +EEE+++ V HL K +YGLK +GR W L + MG RS+ D ++F GE +VAV VDDL IA VDE H + +F + DLG + +LG+E++RD ++ Q +YI + R+ + + +T S ST YR +G LMYA+ GTRPD++Y V + M+NP + KR+ RYL + +T+GG N +G+EGF A+W + R+S +GYVF ++GGA+SW +K KQ +V SSTEAEYVA A KE ++ R LG I TTL+ DN+SAI L+K + H RTKHI +R+H IR+ + G + + Y T + AD+LTK L+R
Sbjct: 78 WVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEI-AIVAVSVDDLAIAAN--SVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSK---KQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTKPLTR 533
BLAST of mRNA_H-paniculata_contig25498.6944.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 307 bits (786), Expect = 2.600e-94 Identity = 174/465 (37.42%), Postives = 271/465 (58.28%), Query Frame = 1
Query: 10 KWIFKRKLKDDGSVARYKTRLVAQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEDMDVDAAYSNAPVEEELYIP------------FVRHLRKSLYGLKLSGRNWNNTLDDFLVGMGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRR-EKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDRTISQGSYIREVQKRYGFDECRGV-TPCAGVQESTRGRSG-------NSTEYRGMVGLLMYASTGTRPDIAYEVHQAAHRMENPCREDFSTCKRIFRYLSTVPDFDITFGGKSNGHGLEGFVYANWAEDVEDRKSTTGYVFNLNGGAMSWCNKFSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGEQYADILTKELSRVNFR 1341
KW+FK K DGS+ R+K RLVAQGFSQ G D ET + V R ++RT +L+ + +L MDV AA+ N +E+E+Y+ L KSLYGLK S R WN+ LD+ L +G ++ +D C+Y ++G +VA++VDD+++AG+ EK+ + K +I++RF++KD+G L +LG++V ++ + I Q +Y + K+YG + C+ V TP V S++ S N E++ VG L+Y S+ TRPDI + V+ A NP E ++ KRIFRYL ++ + + +N + GF A+WA D+ DRKST+GY F +NG A+SW +K KQ V S+ AEYVA A +E +++R+LL + T++EDN+SAI +SK H R+KHI ++++ +R+ + + L + Y TG AD+ TK + + F+
Sbjct: 193 KWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETP---VDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSK---KQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFK 646
BLAST of mRNA_H-paniculata_contig25498.6944.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 305 bits (782), Expect = 7.030e-94 Identity = 175/464 (37.72%), Postives = 267/464 (57.54%), Query Frame = 1
Query: 1 IRTKWIFKRKLKDDGSVARYKTRLVAQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEDMDVDAAYSNAPVEEELYIP------------FVRHLRKSLYGLKLSGRNWNNTLDDFLVGMGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRRE-KVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDRTISQGSYIREVQKRYGFDECRGVTPCAGVQESTRGRSGNS-----TEYRGMVGLLMYASTGTRPDIAYEVHQAAHRMENPCREDFSTCKRIFRYLSTVPDFDITFGGKSNGHGLEGFVYANWAEDVEDRKSTTGYVFNLNGGAMSWCNKFSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGEQYADILTKELSRVNF 1338
+ +KW+F+ K DG+V +K RLVAQGFSQ G+D ET + VAR ++RT +LAA+H +L MDV A+ N ++EE+Y+ V LR+S+ GLK S R WN+ LD L MG ++T D C+Y ++EGGE ++AVYVDD+++AG+ + K++E K ++++F++KD+G LG++V + + + I Q +Y + V +R+G + + + + + +S Y+ VG L+Y ST TRPDIAY V A +P E + KRI RYL+ D + + G G+ A+WA D++DRKST+GYVF ++ A+SW +K KQ V S+ EAEY+ A +E V+L++LL + G + EDN++AI ++K + H R KHI +++H IRE + + L+Y T E ADI TK LS V F
Sbjct: 174 VGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKEHLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSK---KQSCVALSTAEAEYMTLASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQF 632
BLAST of mRNA_H-paniculata_contig25498.6944.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL) HSP 1 Score: 317 bits (813), Expect = 2.400e-93 Identity = 183/470 (38.94%), Postives = 270/470 (57.45%), Query Frame = 1
Query: 1 IRTKWIFKRKLKDDGSVARYKTRLVAQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEDMDVDAAYSNAPVEEELYIP---------FVRH---LRKSLYGLKLSGRNWNNTLDDFLVGMGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIA-GRREKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDRTISQGSYIREVQKRYGFDECRGV-TPCAGVQESTRG---------RSGNSTEYRGMVGLLMYASTGTRPDIAYEVHQAAHRMENPCREDFSTCKRIFRYLSTVPDFDITFGGKSNGHGLEGFVYANWAEDVEDRKSTTGYVFNLNGGAMSWCNKFSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGC-RGSTTLFEDNKSAINLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGEQYADILTKELSRVNF 1338
I +KW+FK K +G + RYK RLVA+GF Q G D ET A VA+ +++R SLAA++ L MDV A+ N ++EE+Y+ + H L+++LYGLK S R WN T+D+F+ +G + D C+Y R++ + V +YVDDL++A ++ + K +S+RF + DLG L LG+EV+RD +GD ++ Q +++ V ++G +C+ V TP + T+ + YR VG LMY GTRPD+A V + +PC + KR+ RYL P I F G S+G L G+ A+WA D+E R+ST+GYV LNGG +SW +K KQ+ V SSTEAEY+A EA +E V+L+ + +G G+ T+FEDN+ AI L+K H RTKHI +R+H +RE + +G + L+Y T E AD++TK L+ F
Sbjct: 908 ISSKWVFKVKETAEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFTSIRIILSLAAQYKLVLHQMDVKTAFLNGLLDEEIYMKQPDGYIDPKYPNHACKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDSA--TMFVVIYVDDLILACNNKDLLAATKRALSERFEMSDLGELKYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFGMQDCKPVKTPQDPGLKLTKSMCEGGCKHDETMKDVPYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSGSSDGE-LIGYSDADWAGDIETRRSTSGYVSVLNGGCISWRSK---KQRTVALSSTEAEYMALSEATQEAVWLKSFMCELGEDSGNGALTVFEDNQGAIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCPTQEMLADLMTKPLAAAQF 1371
BLAST of mRNA_H-paniculata_contig25498.6944.1 vs. uniprot
Match: A0A3S3PWW7_9ACAR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3PWW7_9ACAR) HSP 1 Score: 300 bits (769), Expect = 1.140e-92 Identity = 187/465 (40.22%), Postives = 262/465 (56.34%), Query Frame = 1
Query: 1 IRTKWIFKRKLKDDGSVARYKTRLVAQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEDMDVDAAYSNAPVEEELY--------IPFVRHL----RKSLYGLKLSGRNWNNTLDDFLVGMGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRR-EKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDRTISQGSYIREVQKRYGFDECR-GVTPCA---GVQESTRGRSGNST-EYRGMVGLLMYASTGTRPDIAYEVHQAAHRMENPCREDFSTCKRIFRYLSTVPDFDITFGGKSNGHGLEGFVYANWAEDVEDRKSTTGYVFNLNGGAMSWCNKFSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGEQYADILTKELSRVNFR 1341
I KW+FK K + G++ RYK RLVA+G++Q G D ET A VA+ +T+RT ++AA D E++ M V A+ ++EE Y IP HL RKS+YGLK + R WN+T+ F + G + +D CLY E L V +YVDDL+IA + +++ K+++S+ F + DLG L+ LGIE+ R +SQ YI + KR+ E + +TP QE + +S N YR +VG LMYA TR DIA V + M N F KR+ RYL+ DF + K L G+ A+W + +DRKST+GY+F L G ++SW +K KQQ V SSTEAEY+A A +E V+LR LL IGF TT+FEDN++ I L+K + H RTKHI +R H IRE + G++ ++Y+ + E ADILTK L F+
Sbjct: 117 IGCKWVFKVKEDEKGNIKRYKARLVAKGYTQKYGIDFEETFAPVAKFTTIRTLLTIAAMMDLEIKQMGVKTAFLYGEMQEEAYMEQPEGFVIPGKEHLVCKLRKSIYGLKQAPRMWNSTIHKFFIKNGFKQCQSDWCLYVQTVE---KVLFVLIYVDDLIIASSNTQAIEKLKNDMSKIFSMTDLGELNYFLGIEIIRIREKKSILLSQKRYIMRLLKRFHMQESKPAITPIEFGYKFQEKSEEKSQNEKIPYREIVGSLMYAMVCTRRDIAASVGILSRYMNNFTHSHFKAAKRVLRYLNGTRDFALML--KPENEALIGYSDADWGGNTDDRKSTSGYLFQLGGSSLSWNSK---KQQTVALSSTEAEYMALSTATQECVWLRNLLQEIGFKQEMPTTIFEDNQACIKLTKSTKNHARTKHIDIRHHFIREKVDSGLVEIEYMSSEEMIADILTKPLPGPRFQ 573
BLAST of mRNA_H-paniculata_contig25498.6944.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 314 bits (805), Expect = 1.140e-92 Identity = 176/465 (37.85%), Postives = 272/465 (58.49%), Query Frame = 1
Query: 10 KWIFKRKLKDDGSVARYKTRLVAQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEDMDVDAAYSNAPVEEELYIP------------FVRHLRKSLYGLKLSGRNWNNTLDDFLVGMGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRR-EKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDRTISQGSYIREVQKRYGFDECRGV-TPC-------AGVQESTRGRSGNSTEYRGMVGLLMYASTGTRPDIAYEVHQAAHRMENPCREDFSTCKRIFRYLSTVPDFDITFGGKSNGHGLEGFVYANWAEDVEDRKSTTGYVFNLNGGAMSWCNKFSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGEQYADILTKELSRVNFR 1341
KW+FK K DGS+ R+K RLVAQGFSQ G D ET + V R +RT +L+ + +L MDV AA+ N +E+E+Y+ V L KSLYGLK S R WN+ LD+ L +G ++ +D C+Y ++G +VA++VDD+++AG+ EK+ + K +I++RF++KD+G L +LG++V ++ + I Q +Y + K+YG + C+ V TP + +++S N EY+ VG L+Y S+ TRPDI + V+ A NP E ++ KRIFRYL ++ + + +N + GF A+WA D+ DRKST+GY F +NG A+SW +K KQ V S+ EAEYVA A +E +++R+LL + T++EDN+SAI +SK H R+KHI +++H +R+ + + L + Y TG AD+ TK + + F+
Sbjct: 807 KWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDS---ELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSK---KQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFK 1260
BLAST of mRNA_H-paniculata_contig25498.6944.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 315 bits (807), Expect = 1.150e-92 Identity = 185/467 (39.61%), Postives = 275/467 (58.89%), Query Frame = 1
Query: 1 IRTKWIFKRKLKDDGSVARYKTRLVAQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEDMDVDAAYSNAPVEEELYIP------------FVRHLRKSLYGLKLSGRNWNNTLDDFLVGMGLDRSTTDSCLYFS--RDEGGETNLLV-AVYVDDLV-IAGRREKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDRTISQGSYIREVQKRYGFDECRGV-TPCAGVQE----STRGRSGNSTEYRGMVGLLMYASTGTRPDIAYEVHQAAHRMENPCREDFSTCKRIFRYLSTVPDFDITFGGKSNGHGLEGFVYANWAEDVEDRKSTTGYVFNLNGGAMSWCNKFSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGEQYADILTKELSRVNF 1338
+ ++W+FK K K DGSV ++K RLVAQG+SQ EG D E + V R +++R+ +LA D+E+ MDV A+ + +E+Y+ V L+KSLYGLK S R WN+TLD FL G + DSCLY + + G+ N ++ +++VDD++ + ++E K I +F+++DLG +S +LG+ ++RD + TISQ Y+ V KR+ +EC+ V TP ++ S R N EY+ ++G L Y +T TRPD+A V + M P +E + KRI RY+ +F ITF K L G+ A+WA D E R+ST+GY+F ++G +SWC+K KQ V+ SSTEAEY+A A +E ++LR LL +IG + ST + EDN++AI LS+ H RTKHI V +H +RE +++ + + Y +T E ADILTK L R F
Sbjct: 877 VGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSK---KQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIGVKQKESTVMCEDNQAAIQLSRNPKFHNRTKHIDVAFHFVREKVQDKSIDVVYCRTDEMLADILTKGLPRQTF 1340 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25498.6944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25498.6944.1 >prot_H-paniculata_contig25498.6944.1 ID=prot_H-paniculata_contig25498.6944.1|Name=mRNA_H-paniculata_contig25498.6944.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=449bp IRTKWIFKRKLKDDGSVARYKTRLVAQGFSQVEGEDCFETSARVARMSTLback to top mRNA from alignment at H-paniculata_contig25498:1091..2547- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25498.6944.1 ID=mRNA_H-paniculata_contig25498.6944.1|Name=mRNA_H-paniculata_contig25498.6944.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1457bp|location=Sequence derived from alignment at H-paniculata_contig25498:1091..2547- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25498:1091..2547- >mRNA_H-paniculata_contig25498.6944.1 ID=mRNA_H-paniculata_contig25498.6944.1|Name=mRNA_H-paniculata_contig25498.6944.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2694bp|location=Sequence derived from alignment at H-paniculata_contig25498:1091..2547- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |