prot_H-paniculata_contig2549.6942.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2549.6942.1
Unique Nameprot_H-paniculata_contig2549.6942.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length653
Homology
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BLAST of mRNA_H-paniculata_contig2549.6942.1 vs. uniprot
Match: D7FM09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM09_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 1.610e-39
Identity = 140/281 (49.82%), Postives = 157/281 (55.87%), Query Frame = 0 
Query:  384 PGSFHVGRQNMKEAEVAAARALELKVRXXXXXXXXXXXXXXXXXXXXXXXXXXEAATAVVMPLPTTREEATRDGRVGRRENAFLDTYFAFFGRFARL-ESESEARRTLIELALQDNANPATSLESGGAPGGEAEAESLQRSAAGVGG-------GG-----------PLGIAPSGLRRGVTPEKGASLWAGVGIGAMLQGASAECGEMYAKMAKEQLVGVRSRGATASASMPMLAAAATQGSAAGPPVDIKVQERVRADLMLTVLYDMLGQYEESDGYLAA 645
            PG F VG    +EA+ AAARA E K R                XXXXXXXXXX AATAVV+PLP TREE TRDGRVGRRENAFLDTYFAFFGRF R  + + +AR                    GGA  G   A  L     G GG       GG           P G+A SGL+RGVTPEKGASLWAGVGIGAMLQGAS E GE+YAKMA++QL   ++ G             A +            Q+RVRADLML VLYDMLG+Y+ SD  L A
Sbjct:  475 PGDF-VGTDT-QEADAAAARAAEAKARLVEANARSEMAAHEAKXXXXXXXXXXXAATAVVLPLPATREEITRDGRVGRRENAFLDTYFAFFGRFVRAGDPDGQARSPPXXXXXXXX------XXXGGAGAGGGGASRLPADGPGEGGRANGGEVGGVRSRDRQGSRAPGGVA-SGLKRGVTPEKGASLWAGVGIGAMLQGASPEDGEVYAKMARDQLDTAKAYGEDGXXXXXXXXXCANRR-----------QQRVRADLMLCVLYDMLGRYDMSDECLDA 735
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BLAST of mRNA_H-paniculata_contig2549.6942.1 vs. uniprot
Match: A0A6H5JV62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV62_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 4.370e-36
Identity = 138/300 (46.00%), Postives = 158/300 (52.67%), Query Frame = 0 
Query:  395 KEAEVAAARALELKVRXXXXXXXXXXXXXXXXXXXXXXXXXXEAATAVVMPLPTTREEATRDGRVGRRENAFLDTYFAFFGRFARLESESEARRTLIELALQD------NANPATSLESGGAPG-------------GEAEAESLQRSAAGVGG------GGPL-----------GIAPSGLRRGVTPEKGASLWAGVGIGAMLQ-------------GASAECGEMYAKMAKEQLVGVRSRGATASASMPMLAAAATQGSAAGPPVDIKVQERVRADLMLTVLYDMLGQYEESDGYLAA 645
            +EA+ AAARA+E K R                XXXXXXXXXX  ATAVV+PLP TREE TRDGRVGRRENAFLDTYFAFFGRF R        RTL ELALQD      + +P     S  +PG             G   A  L     G GG      GG +           G   SGL+RGVTPEKGASLWAGVGIGAMLQ             GAS + GE+YAKMA++QL   ++  A                         + Q+RVRADLML VLYDMLG+Y++SD  L A
Sbjct:  512 QEADAAAARAVEAKARLAEANARSEIAAHEAKXXXXXXXXXXXXATAVVLPLPATREEITRDGRVGRRENAFLDTYFAFFGRFVRWVFLF--LRTLTELALQDATTTSADDDPGDQARSPPSPGRTSSPAVPGGWRAGGWGASRLPADGPGEGGRANGGEGGGVRSRDRQGSRAPGRVASGLKRGVTPEKGASLWAGVGIGAMLQVEVTPLTLRIYVGGASPQDGEVYAKMARDQLDSAKASCAN------------------------RRQQRVRADLMLCVLYDMLGRYDKSDECLDA 785
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2549.6942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM09_ECTSI1.610e-3949.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JV62_9PHAE4.370e-3646.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 402..433
NoneNo IPR availablePANTHERPTHR47424FAMILY NOT NAMEDcoord: 133..502
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 131..176
e-value: 3.3E-5
score: 33.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 136..172
e-value: 3.8E-6
score: 26.9
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 136..167
score: 9.908
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 131..199
e-value: 7.5E-8
score: 34.2
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 133..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2549contigH-paniculata_contig2549:1982..20196 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2549.6942.1mRNA_H-paniculata_contig2549.6942.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2549 1982..20196 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2549.6942.1 ID=prot_H-paniculata_contig2549.6942.1|Name=mRNA_H-paniculata_contig2549.6942.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=653bp
KLKLECHFSVKQKSGRKRKPRDGDDPAAQDAGAAATPVSGGGADESGGGG
AGGGEGGAASASASAVRYGAVAAAAAGTASPKALAARVAAAAWANGGGDG
ERSDNGSMSDGGGDVIDGSYGYGGGGGSSSGDINMSCDLCNHRKRRCNGE
LPCSGCLRAGQQDQCLYSTKRKAAKGLGGPFMGHRKPRHEEPMTRTTSSD
LTRVAPSSGYRVSSSPQSHDPGGGGSASGGGSGEGGSHSPVSSTHEAAAA
AASASASGSGAGGNSGSGLRPVSRGTRHPSDPGGTFAPSPQSDSAEANSA
PGSESGSGSGSISARFSPPPGNRSAVAAAPAVMLPPPASTAQAASALSMG
TLSWTTSGRGAATTIANAPVPGPSGFLSPPHLLPGSFHVGRQNMKEAEVA
AARALELKVRSMEAKARSEAAEVEAEAAAAAAEVAKEAATAVVMPLPTTR
EEATRDGRVGRRENAFLDTYFAFFGRFARLESESEARRTLIELALQDNAN
PATSLESGGAPGGEAEAESLQRSAAGVGGGGPLGIAPSGLRRGVTPEKGA
SLWAGVGIGAMLQGASAECGEMYAKMAKEQLVGVRSRGATASASMPMLAA
AATQGSAAGPPVDIKVQERVRADLMLTVLYDMLGQYEESDGYLAAALNVS
CG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf