prot_H-paniculata_contig25478.6939.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25478.6939.1
Unique Nameprot_H-paniculata_contig25478.6939.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length132
Homology
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BLAST of mRNA_H-paniculata_contig25478.6939.1 vs. uniprot
Match: D8LTL7_ECTSI (Heavy metal translocating P-type ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL7_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 8.330e-33
Identity = 69/127 (54.33%), Postives = 85/127 (66.93%), Query Frame = 0 
Query:    6 QVERAILALPGISYCSVSVSTGRARVSFAPVNSGGGVXXXXXXXXXXXXXXXGNEKSHASRMSGARDVVKAVKALGFGASVVDVGGDAISGVKRLQEMTRHDVRMWRRYFFIAALCTVPLLLAHWMQ 132
            +VERA+LALPG++ CSVSV+TGRA ++F    SGG                   E+      SG RDV++AV+ LGFGA  VD+GGDA+SGVKRLQEMTR DV MWRR F ++   TVPLLLAHW+Q
Sbjct:  482 KVERAVLALPGVASCSVSVTTGRASITFKGDGSGG--------------KPSSMEEGTGKEASGVRDVIRAVEGLGFGAKAVDLGGDALSGVKRLQEMTRKDVAMWRRLFLLSVFFTVPLLLAHWLQ 594
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25478.6939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTL7_ECTSI8.330e-3354.33Heavy metal translocating P-type ATPase n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..113
NoneNo IPR availableTMHMMTMhelixcoord: 114..131
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 7..86
score: 8.947

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25478contigH-paniculata_contig25478:21..3431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25478.6939.1mRNA_H-paniculata_contig25478.6939.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25478 21..3431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25478.6939.1 ID=prot_H-paniculata_contig25478.6939.1|Name=mRNA_H-paniculata_contig25478.6939.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp
MYPYPQVERAILALPGISYCSVSVSTGRARVSFAPVNSGGGVGMGALSSS
SDSGDGGGNEKSHASRMSGARDVVKAVKALGFGASVVDVGGDAISGVKRL
QEMTRHDVRMWRRYFFIAALCTVPLLLAHWMQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom