prot_H-paniculata_contig25443.6933.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25443.6933.1
Unique Nameprot_H-paniculata_contig25443.6933.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
BLAST of mRNA_H-paniculata_contig25443.6933.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 93.2 bits (230), Expect = 9.790e-20
Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 0
Query:    6 HWQRAEKVEMQGLIDNGVWTQVERPKNKLVVRKMMLYKRKIGEDGKVEKYKCRLVADGNRRIKDIHFQEDSSPVPAAASTRMMLSLAAIQDWELRHVDFEQAYLQASIDQEI 117
            HW+ A  +E++ L DNG W+ V+ P N   V    +YK K+  DGKVE+YK RLVA G  +I+   +QE  SPV      RM  +LAA Q+W L  +D   A+L   + +E+
Sbjct:  171 HWKEAMDIELKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQNWRLSQLDINNAFLNGELTEEV 282          
BLAST of mRNA_H-paniculata_contig25443.6933.1 vs. uniprot
Match: A0A540NMU0_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NMU0_MALBA)

HSP 1 Score: 82.8 bits (203), Expect = 1.580e-17
Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 0
Query:    6 HWQRAEKVEMQGLIDNGVWTQVERPKNKLVVRKMMLYKRKIGEDGKVEKYKCRLVADGNRRIKDIHFQEDSSPVPAAASTRMMLSLAAIQDWELRHVDFEQAYLQASIDQ 115
            HW+ A + E + L   G W  V  P+N+ V+    +YK K  +DGKV +YK RLVA G  +   + + E  SPV    + R++LSLAA+  W+LR +D + A+L   + +
Sbjct:   64 HWRNAMQEEFEALQKQGTWELVPVPQNRNVIGSKWVYKLKKDQDGKVSRYKARLVAQGFSQEHGLEYDETFSPVVRHTTVRLVLSLAAMNKWDLRQLDVKNAFLHGELQE 173          
BLAST of mRNA_H-paniculata_contig25443.6933.1 vs. uniprot
Match: A0A146H565_MYCCL (Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H565_MYCCL)

HSP 1 Score: 86.7 bits (213), Expect = 2.060e-17
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 0
Query:    2 PEWEHWQRAEKVEMQGLIDNGVWTQVERPKNKLVVRKMMLYKRKIGEDGKVEKYKCRLVADGNRRIKDIHFQEDSSPVPAAASTRMMLSLAAIQDWELRHVDFEQAYLQASID 114
            P+W HWQ A   E+  L   G WT V RP  + VV    + + K    G++EKYK RLVA G  +++ + + E  +P    AS R++L++AA  DW++   DF  AYL   +D
Sbjct: 1072 PDWPHWQAAINTELDSLKSAGTWTVVPRPSGRNVVDCKWVLRIKKNAAGEIEKYKARLVARGFTQVQGVDYYETFAPTAKIASIRLVLAIAARNDWDIDMFDFNSAYLNGELD 1184          
BLAST of mRNA_H-paniculata_contig25443.6933.1 vs. uniprot
Match: UPI000CED7874 (uncharacterized protein LOC112098012 n=1 Tax=Citrus clementina TaxID=85681 RepID=UPI000CED7874)

HSP 1 Score: 81.6 bits (200), Expect = 2.530e-17
Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 0
Query:    7 WQRAEKVEMQGLIDNGVWTQVERPKNKLVVRKMMLYKRKIGEDGKVEKYKCRLVADGNRRIKDIHFQEDSSPVPAAASTRMMLSLAAIQDWELRHVDFEQAYLQASIDQEI 117
            W    K E   LI NG W+ V R  +K VV    +Y+ K   DG V KYK RLVA G ++I  ++  E  SPV   A+ R++LSLA +  W++R VD   A+L   + +E+
Sbjct:   36 WFTTMKKEYAALIQNGTWSLVPRIADKRVVGNKWVYRAKYNTDGSVAKYKARLVAKGFQQIMGVNCFETFSPVIKPATVRVILSLAVMNQWKIRQVDVNNAFLNGELTEEV 146          
BLAST of mRNA_H-paniculata_contig25443.6933.1 vs. uniprot
Match: A0A2I0JPZ3_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JPZ3_PUNGR)

HSP 1 Score: 84.3 bits (207), Expect = 2.800e-17
Identity = 42/108 (38.89%), Postives = 70/108 (64.81%), Query Frame = 0
Query:   10 AEKVEMQGLIDNGVWTQVERPKNKLVVRKMMLYKRKIGEDGKVEKYKCRLVADGNRRIKDIHFQEDSSPVPAAASTRMMLSLAAIQDWELRHVDFEQAYLQASIDQEI 117
            A K E+  + ++ VW  V+ P+  + +R   ++KRKIG DGKVE YK RLVA GNR+ ++++++E  SPV    S R+ML++ A  D+E+  +D + A+L    +++I
Sbjct:  114 AMKSEIDSMNESQVWDLVDPPEGIIPIRNKWVFKRKIGADGKVETYKARLVAKGNRQRQEVNYKETFSPVAMLKSIRIMLAITAHYDYEVWQMDVKTAFLNGHTEEDI 221          
BLAST of mRNA_H-paniculata_contig25443.6933.1 vs. uniprot
Match: UPI0008494023 (uncharacterized mitochondrial protein AtMg00810 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI0008494023)

HSP 1 Score: 84.7 bits (208), Expect = 7.160e-17
Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = 0
Query:   13 VEMQGLIDNGVWTQVERPKNKLVVRKMMLYKRKIGEDGKVEKYKCRLVADGNRRIKDIHFQEDSSPVPAAASTRMMLSLAAIQDWELRHVDFEQAYLQASIDQEI 117
            +E++ L DNG W+ V+ P N   V    +YK K+  DGKVE+YK RLVA G  +I+   +Q+  SPV    + RM  +LAA Q+W L  +D   A+L   + +E+
Sbjct:    3 IELKALEDNGTWSIVQLPSNCHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQKTFSPVVRQTTVRMFFALAATQNWRLSQLDINNAFLNGELTEEV 107          
BLAST of mRNA_H-paniculata_contig25443.6933.1 vs. uniprot
Match: A0A4S4M1W0_9APHY (Uncharacterized protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1W0_9APHY)

HSP 1 Score: 84.7 bits (208), Expect = 9.730e-17
Identity = 41/117 (35.04%), Postives = 72/117 (61.54%), Query Frame = 0
Query:    2 PEWEHWQRAEKVEMQGLIDNGVWTQVERPKNKL-VVRKMMLYKRKIGEDGKVEKYKCRLVADGNRRIKDIHFQEDSSPVPAAASTRMMLSLAAIQDWELRHVDFEQAYLQASIDQEI 117
            P+W  WQ A   E++ L+ N  WT VERP + + VV   ++ + K    G+++KYK RLVA G  ++  + + E  +PV   +S R++L++AA  +W+++  DF  AYL + +D+++
Sbjct: 1164 PDWPKWQAAIGAEIENLVANNTWTVVERPPDDVNVVDSKIVLRVKKNAAGEIDKYKARLVARGFTQVHGVDYFETFAPVAKLSSFRLLLAIAARNNWDIKSFDFSSAYLNSPLDEDV 1280          
BLAST of mRNA_H-paniculata_contig25443.6933.1 vs. uniprot
Match: A0A151T5R4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T5R4_CAJCA)

HSP 1 Score: 84.3 bits (207), Expect = 1.320e-16
Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 0
Query:    5 EHWQRAEKVEMQGLIDNGVWTQVERPKNKLVVRKMMLYKRKIGEDGKVEKYKCRLVADGNRRIKDIHFQEDSSPVPAAASTRMMLSLAAIQDWELRHVDFEQAYLQASIDQEI 117
            E W+ A   EM  L +N  W  V+ PK K VV    ++  K+G DGK+++YK RLVA G  +   I ++E  +PV    S R+++SLAA  DW+L  +D + A+L   +++E+
Sbjct:  862 EKWRAAVLEEMAALEENKTWDIVKLPKEKKVVGCRWIFTTKMGADGKIDRYKARLVAQGYTQTHGIDYEETFAPVAKLNSIRILISLAANLDWKLHQLDVKNAFLNGKLEEEV 974          
BLAST of mRNA_H-paniculata_contig25443.6933.1 vs. uniprot
Match: UPI00090104FD (uncharacterized protein LOC104779870 isoform X1 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00090104FD)

HSP 1 Score: 83.2 bits (204), Expect = 3.070e-16
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 0
Query:    6 HWQRAEKVEMQGLIDNGVWTQVERPKNKLVVRKMMLYKRKIGEDGKVEKYKCRLVADGNRRIKDIHFQEDSSPVPAAASTRMMLSLAAIQDWELRHVDFEQAYL 109
            +W  A   E   LI  G W  V RPKN  ++R M LYK K   +G++ +YK RLVA+GN ++  +   E  SPV   A+ R +L +A   DW LR +D + A+L
Sbjct:  419 NWNPAMGEEYSTLIKMGTWCLVPRPKNTNIIRSMWLYKHKFDSNGRLSRYKARLVANGNSQLPGVDCDETFSPVVKPATIRAVLHVATAYDWPLRQLDVKNAFL 522          
BLAST of mRNA_H-paniculata_contig25443.6933.1 vs. uniprot
Match: A0A182HAC3_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HAC3_AEDAL)

HSP 1 Score: 82.8 bits (203), Expect = 4.460e-16
Identity = 39/117 (33.33%), Postives = 72/117 (61.54%), Query Frame = 0
Query:    1 SPEWEHWQRAEKVEMQGLIDNGVWTQVERPKNKLVVRKMMLYKRKIGEDGKVEKYKCRLVADGNRRIKDIHFQEDSSPVPAAASTRMMLSLAAIQDWELRHVDFEQAYLQASIDQEI 117
            S E E W +A   E Q LIDN  W  V+ P ++ ++    ++KRK+  DGKV+++K RLVA G  +   + F +  +PV   ++ R++L++A  +  +++H+D + AYL  ++++E+
Sbjct:  359 SEEKEKWIKAMSEEYQSLIDNDTWELVDPPTDRNIIGSRWVFKRKLNADGKVDRFKARLVAQGFAQRVGVDFDDSFAPVAMHSTFRLLLTVAGYRKMQVKHLDVKSAYLYGTLEEEV 475          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25443.6933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061F8M9_THECC9.790e-2041.07Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A540NMU0_MALBA1.580e-1737.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A146H565_MYCCL2.060e-1738.05Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473... [more]
UPI000CED78742.530e-1739.64uncharacterized protein LOC112098012 n=1 Tax=Citru... [more]
A0A2I0JPZ3_PUNGR2.800e-1738.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00084940237.160e-1740.00uncharacterized mitochondrial protein AtMg00810 n=... [more]
A0A4S4M1W0_9APHY9.730e-1735.04Uncharacterized protein (Fragment) n=1 Tax=Antrodi... [more]
A0A151T5R4_CAJCA1.320e-1638.05Retrovirus-related Pol polyprotein from transposon... [more]
UPI00090104FD3.070e-1640.38uncharacterized protein LOC104779870 isoform X1 n=... [more]
A0A182HAC3_AEDAL4.460e-1633.33Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 23..117
e-value: 2.7E-18
score: 66.5
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 5..117
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25443contigH-paniculata_contig25443:3274..3624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25443.6933.1mRNA_H-paniculata_contig25443.6933.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25443 3274..3624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25443.6933.1 ID=prot_H-paniculata_contig25443.6933.1|Name=mRNA_H-paniculata_contig25443.6933.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
SPEWEHWQRAEKVEMQGLIDNGVWTQVERPKNKLVVRKMMLYKRKIGEDG
KVEKYKCRLVADGNRRIKDIHFQEDSSPVPAAASTRMMLSLAAIQDWELR
HVDFEQAYLQASIDQEI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like