mRNA_H-paniculata_contig25379.6913.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25379.6913.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI) HSP 1 Score: 160 bits (405), Expect = 2.900e-45 Identity = 73/142 (51.41%), Postives = 97/142 (68.31%), Query Frame = 1
Query: 1 KPGEVVGYYRHRAVTLWAILVIGILTYSALLVDQAMKRREHPSVSFQLSNDVYRYPDIWACLYNYYGCDNRTLEEKCVSSANFTEGGNTRARYHPGGRNEKNIPTRSALTPNKGWCVIIEASEVEVELGKERNPDNRLDYIL 426
+P EV+ ++ RAV LW +L+ GI+ YS+L++ QA+ +R +PSVSF++SN VY YPDIW CLY YGCD+ LEE+C+ SA T GNT A ++PGG E+ IP LTP GWCV E S + LG+ERN LDY+L
Sbjct: 3 RPDEVLPQHKRRAVALWTVLIGGIILYSSLILYQALGKRNNPSVSFEVSNTVYEYPDIWVCLYGEYGCDSWELEEECMESAQLTGWGNTSAVFYPGGEYEQTIPGVGMLTPEDGWCVEFETSTISQFLGQERNASYYLDYLL 144
BLAST of mRNA_H-paniculata_contig25379.6913.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI) HSP 1 Score: 147 bits (370), Expect = 2.740e-39 Identity = 73/142 (51.41%), Postives = 99/142 (69.72%), Query Frame = 1
Query: 1 KPGEVVGYYRHRAVTLWAILVIGILTYSALLVDQAMKRREHPSVSFQLSNDVYRYPDIWACLYNYYGCDNRTLEEKCVSSANFTEGGNTRARYHPGGRNEKNIPTRSALTPNKGWCVIIEASEVEVELGKERNPDNRLDYIL 426
KP EV+ ++ RAVTL+ L++ IL YS LLV A+K+ ++PS SF LSN+VYRYPD + CLYN++GCD+ LEE C SS TEGG++ A ++PGG E+ I T + LT +GWCV E S V++ G ER+P+ DYIL
Sbjct: 3 KPAEVLPQHKRRAVTLFITLIVAILAYSGLLVYNAVKKSKNPSTSFVLSNNVYRYPDTYVCLYNFFGCDDMALEEFCASSVFDTEGGSSTAVFNPGGDLEQEIATTAYLTDERGWCVSFETSAVDIVDG-ERDPE---DYIL 140
BLAST of mRNA_H-paniculata_contig25379.6913.1 vs. uniprot
Match: A0A6H5JN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN97_9PHAE) HSP 1 Score: 144 bits (364), Expect = 3.360e-39 Identity = 69/144 (47.92%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 1 KPGEVVGYYRHRAVTLWAILVIGILTYSALLVDQAMKRREHPSVSFQLSNDVYRYPDIWACLYNYYGCDNRTLEEKCVSSA--NFTEGGNTRARYHPGGRNEKNIPTRSALTPNKGWCVIIEASEVEVELGKERNPDNRLDYIL 426
KP EVV ++ RAV LWAIL+ GI+ YS+ L+ +A+++R+ P S +LSN V+ YPDIW CLY YGCD LEE+C++SA N T GN+ A Y+PGG E+ I TP+ GWCV + S++ LG+ER+ LD++L
Sbjct: 3 KPDEVVPQHKRRAVALWAILIGGIIFYSSYLLHKAVRKRDAPESSIELSNTVFEYPDIWVCLYADYGCDELELEEECMTSATANMTGWGNSSAVYYPGGEYEQEIHVEGRETPDHGWCVEFQTSKITRFLGEERDASRFLDHLL 146
BLAST of mRNA_H-paniculata_contig25379.6913.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI) HSP 1 Score: 142 bits (359), Expect = 6.680e-38 Identity = 69/144 (47.92%), Postives = 94/144 (65.28%), Query Frame = 1
Query: 1 KPGEVVGYYRHRAVTLWAILVIGILTYSALLVDQAMKRREHPSVSFQLSNDVYRYPDIWACLYNYYGCDNRTLEEKCVSSA--NFTEGGNTRARYHPGGRNEKNIPTRSALTPNKGWCVIIEASEVEVELGKERNPDNRLDYIL 426
+P EVV ++ RAV LW IL+ GI+ YS+ L+ A+++RE+P S +LSN V+ YPDIW CLY YGCD LE +C++SA N T GN+ A Y+PGG E+ I LTPN GWCV + S++ L +ER+ LDY+L
Sbjct: 75 RPDEVVPQHKRRAVALWTILIGGIIFYSSYLLYTAVRKRENPDASIELSNTVFEYPDIWVCLYVAYGCDEWELENECMTSATGNRTGWGNSSAVYYPGGVYEQEIHVEGKLTPNNGWCVEFQTSKITRFLDRERDAKYYLDYLL 218
BLAST of mRNA_H-paniculata_contig25379.6913.1 vs. uniprot
Match: A0A6H5L518_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L518_9PHAE) HSP 1 Score: 119 bits (299), Expect = 2.900e-29 Identity = 65/161 (40.37%), Postives = 90/161 (55.90%), Query Frame = 1
Query: 1 KPGEVVGYYRHRAVTLWAILVIGILTYSALLVDQAMKRREHPSVSFQLSNDVYRYPDIWACLYNYYGCDNRTLEEKCVSSANFTEGGNTRARYHPGGR--NEKNIPTR-----------------SALTPNKGWCVIIEASEVEVELGKERNPDNRLDYIL 426
KPG+VV +R RAV +W + V IL+Y L +A ++ + P SF L+N+VY++PD+W CLY YGCD LEEKCV+SA TEGG A ++P + E+ I T ++L +G CVI S +G+ER+P LDYIL
Sbjct: 39 KPGQVVESHRRRAVVVWTVSVAAILSYCGWLFYKAAEKAKAPDTSFLLTNEVYKFPDLWICLYVNYGCDELELEEKCVNSAWTTEGGVPNAVFYPRVQLDQEQEITTEQLQIEAIPENTDVDSEGNSLEDGRGKCVIFRTSAATAFVGQERDPHEFLDYIL 199
BLAST of mRNA_H-paniculata_contig25379.6913.1 vs. uniprot
Match: D7FXH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH8_ECTSI) HSP 1 Score: 117 bits (294), Expect = 1.010e-28 Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = 1
Query: 1 KPGEVVGYYRHRAVTLWAILVIGILTYSALLVDQAMKRREHPSVSFQLSNDVYRYPDIWACLYNYYGCDNRTLEEKCVSSANFTEGGNTRARYHPGGRNEKN-----------IPTRS--ALTPNKGWCVIIEASEVEVELGKERNPDNRLDYIL 426
KP EVV +R RA LWAI+++GI+TY LV + ++R + P+ S +LSN VY YPD+W C YN YGCD+ TLE CV S+ TE G A ++ ++N + T + + +G CV + S +G+ER+PD LDYIL
Sbjct: 3 KPDEVVPDHRRRARVLWAIMMVGIVTYVGWLVYKTVERTKSPNTSVELSNVVYTYPDLWVCPYNQYGCDDITLELGCVESSWETEAGPPNAIFYNSEGTDQNATDPLEIEATWVDTSAIEGIVKGRGLCVEFKTSAATAFVGQERDPDEYLDYIL 157
BLAST of mRNA_H-paniculata_contig25379.6913.1 vs. uniprot
Match: D8LNQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ1_ECTSI) HSP 1 Score: 115 bits (289), Expect = 2.070e-28 Identity = 62/160 (38.75%), Postives = 88/160 (55.00%), Query Frame = 1
Query: 1 KPGEVVGYYRHRAVTLWAILVIGILTYSALLVDQAMKRREHPSVSFQLSNDVYRYPDIWACLYNYYGCDNRTLEEKCVSSANFTEGGNTRARYHPGGRNEKNIPTRS------ALTPN-------------KGWCVIIEASEVEVELGKERNPDNRLDYI 423
KP EV+ +R RAV +W + V+ I+ YS L +A ++ + P SF L+N+VY+ PD+W CLYN YGCD LEE+CV SA TEGG A ++P + ++ T + A+ N +G CVI S +G+ER+P LDYI
Sbjct: 3 KPSEVLESHRRRAVVVWTVSVVAIIAYSGWLFYKAAEKAKSPDTSFVLTNEVYKNPDLWICLYNNYGCDEWELEEECVDSAWMTEGGEPDAVFYPRVKLDQLQETTTEELQIEAIPENTDYDSEGNYVEDGRGQCVIFRTSAATAFVGQERDPHEYLDYI 162
BLAST of mRNA_H-paniculata_contig25379.6913.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE) HSP 1 Score: 115 bits (287), Expect = 1.140e-27 Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 82 SALLVDQAMKRREHPSVSFQLSNDVYRYPDIWACLYNYYGCDNRTLEEKCVSSA--NFTEGGNTRARYHPGGRNEKNIPTRSALTPNKGWCVIIEASEVEVELGKERNPDNRLDYIL 426
S+ L+ +A+++R +P S +LSN V+ YPD+W CLY YGCD LEE+C++SA N T G++ A Y+PGG E+ I LTPN GWCV + S++ LG+ER+ LDY+L
Sbjct: 70 SSYLLYKAVRKRNNPDASIELSNTVFEYPDVWVCLYVDYGCDEWELEEECMTSATANRTGWGHSSAVYYPGGVYEQEIHVEEKLTPNNGWCVEFQTSKITRFLGRERDAKYYLDYLL 186
BLAST of mRNA_H-paniculata_contig25379.6913.1 vs. uniprot
Match: D8LNS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS2_ECTSI) HSP 1 Score: 108 bits (271), Expect = 2.270e-25 Identity = 59/160 (36.88%), Postives = 87/160 (54.37%), Query Frame = 1
Query: 1 KPGEVVGYYRHRAVTLWAILVIGILTYSALLVDQAMKRREHPSVSFQLSNDVYRYPDIWACLYNYYGCDNRTLEEKCVSSANFTEGGNTRARYHPGGRNEKNIPTRS------ALTPN-------------KGWCVIIEASEVEVELGKERNPDNRLDYI 423
KP EV+ +R RAV +W + V+ I YS L +A ++ + P SF L+N+VY++PD+W CL+ YGCD LEE CV SA TEGG A ++P + ++ T + A+ N +G CVI + S +G+ER+P LDY+
Sbjct: 15 KPSEVLEPHRRRAVVVWTVSVVAIFAYSGWLCYKAAEKAKAPDTSFVLTNEVYKFPDLWICLFVNYGCDEWELEEGCVDSAWMTEGGVPDAVFYPRVKLDQLQETTTEELQIEAIPENTDYDSEGNYVEDGRGQCVIFKTSAATTFVGQERDPHEYLDYV 174
BLAST of mRNA_H-paniculata_contig25379.6913.1 vs. uniprot
Match: A0A6H5JG99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG99_9PHAE) HSP 1 Score: 101 bits (251), Expect = 1.270e-24 Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 1
Query: 1 KPGEVVGYYRHRAVTLWAILVIGILTYSALLVDQAMKRREHPSVSFQLSNDVYRYPDIWACLYNYYGCDNRTLEEKCVSSANFTEGGNTRARYH 282
KP EVV +R RA LWAI+++G++TY LLV ++R + P+ S +LSN VY YPD+W C YN YGCD+ TLE CV+S+ TE G A ++
Sbjct: 13 KPDEVVPNHRRRARVLWAIMMVGVITYIGLLVKNTVERMKSPNTSVELSNVVYTYPDLWVCPYNQYGCDDITLELGCVTSSWRTEAGPPSAIFY 106 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25379.6913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25379.6913.1 >prot_H-paniculata_contig25379.6913.1 ID=prot_H-paniculata_contig25379.6913.1|Name=mRNA_H-paniculata_contig25379.6913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp KPGEVVGYYRHRAVTLWAILVIGILTYSALLVDQAMKRREHPSVSFQLSNback to top mRNA from alignment at H-paniculata_contig25379:1492..2948+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25379.6913.1 ID=mRNA_H-paniculata_contig25379.6913.1|Name=mRNA_H-paniculata_contig25379.6913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1457bp|location=Sequence derived from alignment at H-paniculata_contig25379:1492..2948+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25379:1492..2948+ >mRNA_H-paniculata_contig25379.6913.1 ID=mRNA_H-paniculata_contig25379.6913.1|Name=mRNA_H-paniculata_contig25379.6913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at H-paniculata_contig25379:1492..2948+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |