prot_H-paniculata_contig2537.6909.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2537.6909.1
Unique Nameprot_H-paniculata_contig2537.6909.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length216
Homology
BLAST of mRNA_H-paniculata_contig2537.6909.1 vs. uniprot
Match: A0A6H5KE21_9PHAE (E2F_TDP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE21_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 5.380e-42
Identity = 81/112 (72.32%), Postives = 96/112 (85.71%), Query Frame = 0
Query:    4 EARVDQLIAHVKDQIRNLQPPDTSRPTGDMYLHQRDISGLPHYQQNTVMAIRAPQGTTLEVPDPDEGMPEGERRYQIYLKSPRGPIDVYVVSKGLKERIESPNAADPDDDLE 115
            EARVDQLIAHVK+Q++ L P ++++P+GDM+LHQ+DI GLP Y+ NTVMAIRAP GTTLEVPDPDEGMP+GERRYQIYLKSP GPIDVYVVS+ + ERIE P   D D D+E
Sbjct:  135 EARVDQLIAHVKEQLKKL-PNESNKPSGDMFLHQQDIRGLPCYKNNTVMAIRAPAGTTLEVPDPDEGMPQGERRYQIYLKSPSGPIDVYVVSQ-VDERIE-PGPEDDDGDVE 243          
BLAST of mRNA_H-paniculata_contig2537.6909.1 vs. uniprot
Match: D8LEV2_ECTSI (Transcription factor E2F n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV2_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 3.500e-41
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = 0
Query:    4 EARVDQLIAHVKDQIRNLQPPDTSRPTGDMYLHQRDISGLPHYQQNTVMAIRAPQGTTLEVPDPDEGMPEGERRYQIYLKSPRGPIDVYVVSKGLKERIE 103
            EARVDQLIAHVK Q++ L P ++++P+GDM+LHQ+DI GLP Y++NTVMAIRAP GTTLEVPDPDEGMP GERRYQIYLKSP GPIDVYVVS+ + ERIE
Sbjct:  157 EARVDQLIAHVKGQLKKL-PTESNKPSGDMFLHQQDIRGLPCYKKNTVMAIRAPAGTTLEVPDPDEGMPHGERRYQIYLKSPSGPIDVYVVSQ-VDERIE 254          
BLAST of mRNA_H-paniculata_contig2537.6909.1 vs. uniprot
Match: UPI000900EAA1 (transcription factor E2FB-like isoform X1 n=5 Tax=Ipomoea TaxID=4119 RepID=UPI000900EAA1)

HSP 1 Score: 98.2 bits (243), Expect = 2.530e-20
Identity = 48/109 (44.04%), Postives = 77/109 (70.64%), Query Frame = 0
Query:    1 MAREARVDQLIAHVKDQIRNLQPPDTSRPTGDMYLHQRDISGLPHYQQNTVMAIRAPQGTTLEVPDPDEGMPEGERRYQIYLKSPRGPIDVYVVSKGLKERIESPNAAD 109
            M  E R+D+ I  ++D++R+L   + ++  G +++ + DI GLP +Q  T++AI+AP GTTLEVPDPDE +   +RRY++ L+S  GPIDVY+VS+  ++++E  NA D
Sbjct:  210 MLEERRIDEEIREMQDRLRDLSEDENNK--GWLFVTEEDIKGLPCFQNGTLLAIKAPHGTTLEVPDPDEAVDYPQRRYRVILRSTMGPIDVYLVSQ-FEKKLEEMNAVD 315          
BLAST of mRNA_H-paniculata_contig2537.6909.1 vs. uniprot
Match: A0A1W0AAR8_9STRA (Transcription factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAR8_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.930e-20
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    4 EARVDQLIAHVKDQIRNLQP---------PDTSRPTGDMYLHQRDISGLPHYQQNTVMAIRAPQGTTLEVPDPDEGMPEGERRYQIYLKSPRGPIDVYVVSK 96
            E  +D  I H+   ++ L           P+  +P G  Y+  +DI  LP     ++MAI+AP GTTLEVPDPDEGMP G RR+QI+LKS  GP+DVY+VS+
Sbjct:  203 EKLIDHFIRHMTLSVKQLHDCENEQDDNEPEEKKPPGQCYISHQDIRCLPSLADQSIMAIKAPPGTTLEVPDPDEGMPTGSRRFQIFLKSDEGPVDVYLVSQ 304          
BLAST of mRNA_H-paniculata_contig2537.6909.1 vs. uniprot
Match: A0A2P5D9W8_PARAD (E2F Family n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5D9W8_PARAD)

HSP 1 Score: 96.3 bits (238), Expect = 1.450e-19
Identity = 50/122 (40.98%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    4 EARVDQLIAHVKDQIRNLQPPDTSRPTGDMYLHQRDISGLPHYQQNTVMAIRAPQGTTLEVPDPDEGMPEGERRYQIYLKSPRGPIDVYVVSKGLKERIESPNAADPDDDLEVNQDQGHPHP 125
            E R+D  I  +++++R+L   +T++    +++ + DI GLP +Q  T++AI+AP GTTLEVPDPDE +   +RRY+I L+S  GPIDVY+VS+  +E+ E  N A+P  +  +    G   P
Sbjct:  241 ERRLDDRIREMQERLRDLSEDETNQKW--LFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIILRSTMGPIDVYLVSQ-FEEKFEDVNGAEPPANFPIASSSGSSEP 359          
BLAST of mRNA_H-paniculata_contig2537.6909.1 vs. uniprot
Match: A0A2Z6NUM8_TRISU (E2F_TDP domain-containing protein (Fragment) n=5 Tax=Trifolium TaxID=3898 RepID=A0A2Z6NUM8_TRISU)

HSP 1 Score: 95.5 bits (236), Expect = 2.540e-19
Identity = 49/118 (41.53%), Postives = 78/118 (66.10%), Query Frame = 0
Query:    4 EARVDQLIAHVKDQIRNLQPPDTSRPTGDMYLHQRDISGLPHYQQNTVMAIRAPQGTTLEVPDPDEGMPEGERRYQIYLKSPRGPIDVYVVSKGLKERIESPNAADPDDDLEVNQDQG 121
            E R+D  I  +++++R+L   + ++    +Y+ + DI GLP +Q  T++AI+AP GTTLEVPDP+E +   +RRY+I L+S  GPIDVY++S+  +E+ E  NAA+P   L +    G
Sbjct:  234 EQRLDDKIREMQEKLRSLSEDENNQKF--LYVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPEEAVDYLQRRYRIILRSTMGPIDVYLISQ-FEEKFEEINAAEPPTSLAIASSSG 348          
BLAST of mRNA_H-paniculata_contig2537.6909.1 vs. uniprot
Match: W7TM35_9STRA (Transcription factor e2fb n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM35_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.720e-19
Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 0
Query:   30 TGDMYLHQRDISGLPHYQQNTVMAIRAPQGTTLEVPDPDEGMPEGERRYQIYLKSPRGPIDVYVVS 95
            TG MY+ Q D+  LP Y   TV+AIRAPQGTTLEVPDPDEGM  GERRYQI L S  GP+D+Y+V+
Sbjct:  150 TGLMYVTQEDLGKLPCYDAQTVIAIRAPQGTTLEVPDPDEGMANGERRYQIQLVSSNGPVDIYLVN 215          
BLAST of mRNA_H-paniculata_contig2537.6909.1 vs. uniprot
Match: D2W467_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2W467_NAEGR)

HSP 1 Score: 93.6 bits (231), Expect = 2.950e-19
Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 0
Query:    4 EARVDQLIAHVKDQIRNLQPPDTSRPTGDMYLHQRDISGLPHYQQNTVMAIRAPQGTTLEVPDPDEGMPEGERRYQIYLKSPRGPIDVYVVSKGLKERIESPNAADP 110
            E +VDQLI HV++ +R L   + +R     ++   D+  +   +  TV+AI+AP GTTL VPDPDEGM  G+RRYQI+LKSP  PIDVY+V +   ++ ++ ++ DP
Sbjct:  157 ERQVDQLIYHVQESLRCLNESEQNRRLA--FVTYDDVLDISTLKDRTVIAIKAPSGTTLTVPDPDEGMEMGKRRYQIFLKSPAEPIDVYLVDRDSDQQQQANHSGDP 261          
BLAST of mRNA_H-paniculata_contig2537.6909.1 vs. uniprot
Match: A0A6A3C7Q2_HIBSY (Transcription factor E2FA n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C7Q2_HIBSY)

HSP 1 Score: 91.7 bits (226), Expect = 4.510e-19
Identity = 47/107 (43.93%), Postives = 73/107 (68.22%), Query Frame = 0
Query:    4 EARVDQLIAHVKDQIRNLQPPDTSRPTGDMYLHQRDISGLPHYQQNTVMAIRAPQGTTLEVPDPDEGMPEGERRYQIYLKSPRGPIDVYVVSKGLKERIESPNAADP 110
            E R D  I  +++++R+L   +TS+    +++ + DI G+P +Q  T++AI+AP GTTLEVPDPDE +   +RRY+I L+S  GPIDVY+VS+  +E+ E  N  +P
Sbjct:    3 EHRFDDQIREMQERLRDLSENETSQRW--LFVTEEDIKGIPCFQNETLIAIKAPHGTTLEVPDPDEDVDYRQRRYRIILRSTMGPIDVYLVSQ-FEEKFEEMNGGNP 106          
BLAST of mRNA_H-paniculata_contig2537.6909.1 vs. uniprot
Match: UPI001E1DE88A (transcription factor E2FA-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE88A)

HSP 1 Score: 93.2 bits (230), Expect = 9.250e-19
Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 0
Query:    4 EARVDQLIAHVKDQIRNLQPPDTSRPTGDMYLHQRDISGLPHYQQNTVMAIRAPQGTTLEVPDPDEGMPEGERRYQIYLKSPRGPIDVYVVSKGLKERIESPNAADP 110
            EA++D  IA ++D++R L   +        Y+   DI+ +P  Q +T++AI+AP GT LEVPDPD+GMP GERRYQI+LKS  GPID  +VS+G ++   +  A  P
Sbjct:   91 EAQLDSQIATLQDRLRELASGEQCASYA--YVTHADITSIPELQGDTLIAIKAPPGTELEVPDPDDGMPYGERRYQIFLKSTAGPIDCLLVSQGGEQNAAASVAPQP 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2537.6909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE21_9PHAE5.380e-4272.32E2F_TDP domain-containing protein n=1 Tax=Ectocarp... [more]
D8LEV2_ECTSI3.500e-4176.00Transcription factor E2F n=1 Tax=Ectocarpus silicu... [more]
UPI000900EAA12.530e-2044.04transcription factor E2FB-like isoform X1 n=5 Tax=... [more]
A0A1W0AAR8_9STRA2.930e-2046.08Transcription factor n=1 Tax=Thraustotheca clavata... [more]
A0A2P5D9W8_PARAD1.450e-1940.98E2F Family n=2 Tax=Cannabaceae TaxID=3481 RepID=A0... [more]
A0A2Z6NUM8_TRISU2.540e-1941.53E2F_TDP domain-containing protein (Fragment) n=5 T... [more]
W7TM35_9STRA2.720e-1966.67Transcription factor e2fb n=1 Tax=Nannochloropsis ... [more]
D2W467_NAEGR2.950e-1944.86Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
A0A6A3C7Q2_HIBSY4.510e-1943.93Transcription factor E2FA n=1 Tax=Hibiscus syriacu... [more]
UPI001E1DE88A9.250e-1945.79transcription factor E2FA-like n=1 Tax=Mercenaria ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032198E2F transcription factor, CC-MB domainPFAMPF16421E2F_CC-MBcoord: 3..94
e-value: 1.1E-25
score: 89.8
NoneNo IPR availablePANTHERPTHR12081:SF18TRANSCRIPTION FACTOR E2F1coord: 3..173
IPR015633E2F FamilyPANTHERPTHR12081TRANSCRIPTION FACTOR E2Fcoord: 3..173
IPR037241E2F-DP heterodimerization regionSUPERFAMILY144074E2F-DP heterodimerization regioncoord: 2..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2537contigH-paniculata_contig2537:13662..17778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2537.6909.1mRNA_H-paniculata_contig2537.6909.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2537 13662..17799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2537.6909.1 ID=prot_H-paniculata_contig2537.6909.1|Name=mRNA_H-paniculata_contig2537.6909.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=216bp
MAREARVDQLIAHVKDQIRNLQPPDTSRPTGDMYLHQRDISGLPHYQQNT
VMAIRAPQGTTLEVPDPDEGMPEGERRYQIYLKSPRGPIDVYVVSKGLKE
RIESPNAADPDDDLEVNQDQGHPHPHHNHHQQQHQQHHHHQHHHQQQQQQ
QQQQHHHHHHHHHKGSSSSMNDENQPYLGSGAGPGGGGVEGNGNGGARSS
PAHHDASHVRSRNRLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032198E2F_CC-MB
IPR015633E2F
IPR037241E2F-DP_heterodim