prot_H-paniculata_contig2537.6908.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2537.6908.1
Unique Nameprot_H-paniculata_contig2537.6908.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length76
Homology
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BLAST of mRNA_H-paniculata_contig2537.6908.1 vs. uniprot
Match: D8LEV2_ECTSI (Transcription factor E2F n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV2_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.070e-14
Identity = 44/67 (65.67%), Postives = 52/67 (77.61%), Query Frame = 0 
Query:    8 TPIM-KLSPPKPEPDFSYSMFDHVPGLTELFVGAPTAPNMTEESIQ-DDLQQSE-LLDAFYDTPRRG 71
            TP+M KLSP KPEPDFSY+MFDH  GLTELFVGA         ++Q DDLQQ++ +LDAF+DTPRRG
Sbjct:  321 TPLMTKLSPCKPEPDFSYNMFDH--GLTELFVGASGGVQAPGGNMQGDDLQQADGMLDAFFDTPRRG 385
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2537.6908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEV2_ECTSI1.070e-1465.67Transcription factor E2F n=1 Tax=Ectocarpus silicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2537contigH-paniculata_contig2537:6353..10374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2537.6908.1mRNA_H-paniculata_contig2537.6908.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2537 6029..13449 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2537.6908.1 ID=prot_H-paniculata_contig2537.6908.1|Name=mRNA_H-paniculata_contig2537.6908.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp
MGLGLGFTPIMKLSPPKPEPDFSYSMFDHVPGLTELFVGAPTAPNMTEES
IQDDLQQSELLDAFYDTPRRGGNNT*
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