prot_H-paniculata_contig25367.6906.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25367.6906.1
Unique Nameprot_H-paniculata_contig25367.6906.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length88
Homology
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 84.3 bits (207), Expect = 2.080e-17
Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    2 WHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIA 86
            W EA+  E + +E    WT V N+ KG   +SA+W+F  K+DE+GNV +  ARLVARG+SQ+  +D+ E FAP V   +V+ ++A
Sbjct:  189 WKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLA 273          
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI)

HSP 1 Score: 84.3 bits (207), Expect = 4.200e-17
Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    2 WHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIA 86
            W EA+  E + +E    WT V N+ KG   +SA+W+F  K+DE+GNV +  ARLVARG+SQ+  +D+ E FAP V   +V+ ++A
Sbjct:  564 WKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLA 648          
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A5C3EBA0_9BASI (Related to Retrotransposon protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3EBA0_9BASI)

HSP 1 Score: 79.7 bits (195), Expect = 1.810e-15
Identity = 37/84 (44.05%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    2 WHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVI 85
            W EA++VE + L+N   WT VD +      ++A+WVF  K D  GNV+K  ARLVARGF+Q H +D+ + + P V+ +S+++VI
Sbjct:  878 WEEAIKVELDSLDNTGTWTIVD-LPAARKAITAKWVFKTKQDADGNVSKYKARLVARGFTQMHGIDYHDTYLPVVSMTSLRLVI 960          
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A6J1EPQ0_CUCMO (uncharacterized protein LOC111436713 n=1 Tax=Cucurbita moschata TaxID=3662 RepID=A0A6J1EPQ0_CUCMO)

HSP 1 Score: 74.7 bits (182), Expect = 4.270e-15
Identity = 35/87 (40.23%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    2 WHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA 88
            W  A+  + E +E  + W  + N+ KG   +  +WVF  K++E G V K  ARLVA+G++QQH +D+ EVFAP     +++M+IA+A
Sbjct:   40 WRAAIDFKIEAIERNETWE-LTNLPKGMKKIGVKWVFKTKLNENGEVDKYKARLVAKGYAQQHGIDYTEVFAPMARWGTIRMIIALA 125          
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A6H5L9Z3_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Z3_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 4.620e-15
Identity = 39/85 (45.88%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    4 EAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA 88
            EA+R EFEG    + +++VD   +GST VS++W F+WKI+++G + K   RLVARGFSQ  NVD     +P  +++S+K++ AVA
Sbjct: 1007 EAMREEFEGHLGTRTFSFVDGTPEGSTPVSSKWCFSWKINKEGKIEKFKERLVARGFSQIPNVDHFHSSSPCPSSASIKLMFAVA 1091          
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A0J7K788_LASNI (Retrotransposon ty1-copia subclass n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K788_LASNI)

HSP 1 Score: 77.4 bits (189), Expect = 5.780e-15
Identity = 36/87 (41.38%), Postives = 62/87 (71.26%), Query Frame = 0
Query:    2 WHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA 88
            W EA++ E++ L+  +AW  VD +  G  VV+++W+F  K DE+GN T+  ARLVA+G +Q+H +D+ E F+P V  S+++++++VA
Sbjct:    9 WLEAMKNEYKSLKQNEAWILVD-LPAGRRVVNSKWIFKIKKDEKGNTTRYKARLVAKGCTQRHGIDYFETFSPVVRTSTIRLLMSVA 94          
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: Q69FA4_PHAVU (Gag-pol polyprotein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=Q69FA4_PHAVU)

HSP 1 Score: 76.3 bits (186), Expect = 2.980e-14
Identity = 33/87 (37.93%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    2 WHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA 88
            W +A++ E E ++    WT VD + KG+  +  +W+F  K    G++ K  ARLVA+GF+Q+HN+D+ + FAP    SS+++++A+A
Sbjct:  784 WDKAIKTELESIKKNNTWTLVD-LPKGAKPIGCKWIFKKKYHPDGSIEKYKARLVAKGFTQKHNIDYFDTFAPVTRISSIRVLLALA 869          
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A392N4V4_9FABA (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392N4V4_9FABA)

HSP 1 Score: 73.6 bits (179), Expect = 1.320e-13
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    1 MWHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAP 74
            +W EA+  E E +E  K W  VD + +G   +  +WV+  K +EQG V K  ARLVA+G++QQH +DF EVFAP
Sbjct:  223 VWREAMDQEIESIERNKTWELVD-LPQGMKKIGVKWVYKTKYNEQGKVEKYKARLVAKGYTQQHGIDFNEVFAP 295          
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A4Y1RRK6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RRK6_PRUDU)

HSP 1 Score: 69.3 bits (168), Expect = 1.370e-13
Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = 0
Query:    8 VEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA 88
            VE + +E    W  VD + KG   V  +W++  K++E+G V K  ARLVA+G++Q+H +D+ EVFAP     ++++V+++A
Sbjct:    3 VEIKSIEKNGTWELVD-LPKGEKTVGVKWIYKTKLNEKGEVDKYKARLVAKGYTQEHGIDYAEVFAPVARLDTIRLVVSLA 82          
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Match: A0A822Z8D1_NELNU (Uncharacterized protein n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822Z8D1_NELNU)

HSP 1 Score: 74.3 bits (181), Expect = 1.420e-13
Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    2 WHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTKPNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIA 86
            W  A+  E + +EN   W   D+   G+  +  +W++  K++E GNV K  ARLVA+G++QQH VD++EVFAP     +++++IA
Sbjct:  801 WRAAMDSEIKSIENNDTWVLTDSPA-GAKKIGVKWIYKTKLNEHGNVDKYKARLVAKGYTQQHGVDYIEVFAPVARMDTIRIIIA 884          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25367.6906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7K416_LASNI2.080e-1744.71Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
A0A0J7KM48_LASNI4.200e-1744.71Integrase catalytic domain-containing protein n=2 ... [more]
A0A5C3EBA0_9BASI1.810e-1544.05Related to Retrotransposon protein n=1 Tax=Ustilag... [more]
A0A6J1EPQ0_CUCMO4.270e-1540.23uncharacterized protein LOC111436713 n=1 Tax=Cucur... [more]
A0A6H5L9Z3_9PHAE4.620e-1545.88CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A0J7K788_LASNI5.780e-1541.38Retrotransposon ty1-copia subclass n=1 Tax=Lasius ... [more]
Q69FA4_PHAVU2.980e-1437.93Gag-pol polyprotein n=1 Tax=Phaseolus vulgaris Tax... [more]
A0A392N4V4_9FABA1.320e-1347.30Retrovirus-related pol polyprotein from transposon... [more]
A0A4Y1RRK6_PRUDU1.370e-1338.27Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A822Z8D1_NELNU1.420e-1338.82Uncharacterized protein n=2 Tax=Nelumbo nucifera T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 17..88
e-value: 1.1E-14
score: 54.7
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 2..88
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25367contigH-paniculata_contig25367:12..275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25367.6906.1mRNA_H-paniculata_contig25367.6906.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25367 12..299 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25367.6906.1 ID=prot_H-paniculata_contig25367.6906.1|Name=mRNA_H-paniculata_contig25367.6906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp
MWHEAVRVEFEGLENLKAWTYVDNVRKGSTVVSARWVFAWKIDEQGNVTK
PNARLVARGFSQQHNVDFLEVFAPTVAASSVKMVIAVA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like