prot_H-paniculata_contig25363.6904.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25363.6904.1
Unique Nameprot_H-paniculata_contig25363.6904.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length63
Homology
BLAST of mRNA_H-paniculata_contig25363.6904.1 vs. uniprot
Match: A0A6A3XRN8_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XRN8_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.710e-13
Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    3 TTLYEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQLADILTKA 62
            TT++EDN+ AI L + +G H RTKH+ +R H IRE +  G + ++YV T +QLAD+LTKA
Sbjct:   43 TTIWEDNQGAIALAQNAGYHARTKHVDIRHHFIRENVERGTVKVEYVDTKNQLADMLTKA 102          
BLAST of mRNA_H-paniculata_contig25363.6904.1 vs. uniprot
Match: A0A7H4LDI7_WHEAT (Genome assembly, chromosome: II n=2 Tax=Triticinae TaxID=1648030 RepID=A0A7H4LDI7_WHEAT)

HSP 1 Score: 71.6 bits (174), Expect = 4.480e-13
Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 GSTTLYEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQLADILTKA 62
            G+TT++ DNKSAI L K    H R+KHI VR+H IR+ + EG + +K++ TGDQLADI TK+
Sbjct: 1216 GATTIFIDNKSAIQLCKNPVCHDRSKHIDVRFHFIRKCVEEGKIRVKHIATGDQLADIFTKS 1277          
BLAST of mRNA_H-paniculata_contig25363.6904.1 vs. uniprot
Match: A0A4Y9XYA6_9APHY (Uncharacterized protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XYA6_9APHY)

HSP 1 Score: 67.4 bits (163), Expect = 6.700e-13
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    3 TTLYEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQLADILTKA 62
            T +  DN+SA+ L K +  H RTKHI VR+H IRE I +G + ++YV TGDQ+AD+LTKA
Sbjct:   43 TLILVDNQSAMALAKNATFHDRTKHIAVRYHFIREKIDDGEVRVEYVPTGDQVADVLTKA 102          
BLAST of mRNA_H-paniculata_contig25363.6904.1 vs. uniprot
Match: H3H5K8_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5K8_PHYRM)

HSP 1 Score: 70.5 bits (171), Expect = 7.540e-13
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    3 TTLYEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQLADILTKA 62
            TT++EDN+ AI L + +G H RTKH+ +R H IRE +  G + ++YV T +QLADILTKA
Sbjct:  233 TTIWEDNQGAIALAQNAGYHARTKHVDIRHHFIRENVERGTVTVEYVDTKNQLADILTKA 292          
BLAST of mRNA_H-paniculata_contig25363.6904.1 vs. uniprot
Match: A0A6A3JPU3_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JPU3_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 8.300e-13
Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    3 TTLYEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQLADILTKA 62
            TT++EDN+ AI L + +G H RTKH+ +R H IRE ++ G + ++YV T +QLADILTKA
Sbjct:  697 TTIWEDNQGAIALAQNAGYHARTKHVDIRHHFIRENVKRGTVKVEYVDTKNQLADILTKA 756          
BLAST of mRNA_H-paniculata_contig25363.6904.1 vs. uniprot
Match: A0A151R7G2_CAJCA (Copia protein n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R7G2_CAJCA)

HSP 1 Score: 65.9 bits (159), Expect = 1.120e-12
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    3 TTLYEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQLADILTKA 62
            T L+ DNKSAI++ K    H RTKHI V++H IRE  + G + L Y ++G+QLADILTKA
Sbjct:    4 TVLWCDNKSAISIAKNPIQHGRTKHINVKFHAIREAEKNGDVQLTYCRSGEQLADILTKA 63          
BLAST of mRNA_H-paniculata_contig25363.6904.1 vs. uniprot
Match: A0A6A3GRJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GRJ1_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.440e-12
Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    3 TTLYEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQLADILTKA 62
            TT++EDN+ AI L   +G H RTKH+ +R H IRE +  G + ++YV T +QLADILTKA
Sbjct:  149 TTIWEDNQGAIALVHNAGYHARTKHVDIRHHFIRENVERGTVKVEYVDTKNQLADILTKA 208          
BLAST of mRNA_H-paniculata_contig25363.6904.1 vs. uniprot
Match: A0A6A4D097_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4D097_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.960e-12
Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    3 TTLYEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQLADILTKA 62
            TT++EDN+ AI L + +G H RTKH+ +R H IRE +  G + ++YV T +QLAD+LTKA
Sbjct:  731 TTIWEDNQGAIALAQNAGYHARTKHVDIRHHFIRENVERGTVKVEYVDTTNQLADMLTKA 790          
BLAST of mRNA_H-paniculata_contig25363.6904.1 vs. uniprot
Match: A0A6A3HFF3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HFF3_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.870e-12
Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    3 TTLYEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQLADILTKA 62
            TT++EDN+ AI L   +G H RTKH+ +R H IRE +  G + ++YV T +QLADILTKA
Sbjct:  220 TTIWEDNQGAIALVHNAGYHARTKHVDIRHHFIRENVERGTVKVEYVDTKNQLADILTKA 279          
BLAST of mRNA_H-paniculata_contig25363.6904.1 vs. uniprot
Match: UPI001E1CA6F9 (LOW QUALITY PROTEIN: uncharacterized protein LOC109774810 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001E1CA6F9)

HSP 1 Score: 68.6 bits (166), Expect = 5.450e-12
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    3 TTLYEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQLADILTKA 62
            T L  DNKSAI L K    H RTKHI  R+H IRE +++G +A+ Y+ TG+QLADI+TKA
Sbjct: 1352 TPLLIDNKSAIQLCKNPVFHDRTKHIETRFHFIRECVQDGRIAVDYIHTGEQLADIMTKA 1411          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25363.6904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3XRN8_9STRA1.710e-1351.67Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A7H4LDI7_WHEAT4.480e-1354.84Genome assembly, chromosome: II n=2 Tax=Triticinae... [more]
A0A4Y9XYA6_9APHY6.700e-1355.00Uncharacterized protein n=1 Tax=Fomitopsis rosea T... [more]
H3H5K8_PHYRM7.540e-1353.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3JPU3_9STRA8.300e-1353.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151R7G2_CAJCA1.120e-1255.00Copia protein n=2 Tax=Cajanus cajan TaxID=3821 Rep... [more]
A0A6A3GRJ1_9STRA2.440e-1253.33Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6A4D097_9STRA3.960e-1251.67Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3HFF3_9STRA4.870e-1253.33Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
UPI001E1CA6F95.450e-1256.67LOW QUALITY PROTEIN: uncharacterized protein LOC10... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25363contigH-paniculata_contig25363:47..235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25363.6904.1mRNA_H-paniculata_contig25363.6904.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25363 47..235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25363.6904.1 ID=prot_H-paniculata_contig25363.6904.1|Name=mRNA_H-paniculata_contig25363.6904.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp
GSTTLYEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQ
TGDQLADILTKA*
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