prot_H-paniculata_contig25340.6898.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25340.6898.1
Unique Nameprot_H-paniculata_contig25340.6898.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length112
Homology
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: D8LK76_ECTSI (Bifunctional Indole-3-Glycerol Phosphate Synthase/Phosphoribosylanthranilate Isomerase (C-terminal) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK76_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.580e-43
Identity = 77/108 (71.30%), Postives = 87/108 (80.56%), Query Frame = 0
Query:    1 MEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRALLGREGHSQV 108
            M IAL+AGARV+GVNNRNLHTF +DL+TTERVALVA   GVPW+ P E W ++RIVL ALSGI GP DV+RF  +GVSMVLVGETLMRA DPAK IR LLG E  + V
Sbjct:   13 MTIALEAGARVVGVNNRNLHTFEMDLETTERVALVAAAMGVPWQNPTESWTRDRIVLSALSGITGPEDVKRFETMGVSMVLVGETLMRAEDPAKAIRTLLGEEDPTPV 120          
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A835YVM1_9STRA (Indole-3-glycerol phosphate synthase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM1_9STRA)

HSP 1 Score: 115 bits (289), Expect = 7.120e-28
Identity = 61/103 (59.22%), Postives = 74/103 (71.84%), Query Frame = 0
Query:    1 MEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRALLGRE 103
            ME+AL AGARVIGVN+RNLHTF LD++ T+RV+ +A   G+ W   G+      I L ALSGI GPA+V  F   GVSMVLVGETLMRA DP + IR LLG++
Sbjct:  220 MEVALDAGARVIGVNSRNLHTFKLDMEATQRVSRIAAARGIRWGHRGD------IQLAALSGITGPAEVDAFRAAGVSMVLVGETLMRAADPREAIRTLLGQQ 316          
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: W7TZP3_9STRA (Anthranilate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZP3_9STRA)

HSP 1 Score: 112 bits (281), Expect = 9.830e-27
Identity = 65/109 (59.63%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    1 MEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKER--IVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRALLGREGHSQ 107
            MEIAL AGA+V+GVNNRNLHTF LDL TTERV  VA       R  G  W++ R  I L ALSGI+  ADV R+ + GVS+VLVGETLMRA DP+  +R LLG E  +Q
Sbjct:  259 MEIALDAGAKVVGVNNRNLHTFQLDLGTTERVMEVA-------RKRGLSWDRRRGDIALAALSGISVRADVARYEEAGVSVVLVGETLMRASDPSLAVRELLGLERDAQ 360          
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A7S3P4V6_9STRA (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4V6_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.650e-23
Identity = 55/106 (51.89%), Postives = 67/106 (63.21%), Query Frame = 0
Query:    1 MEIALKAGARVIGVNNRNLHTFSLDLQTTERVA-------LVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRAL 99
            +++ALKAGARVIGVNNRNLHTF +DL T+ERVA       L  GH   P              LCALSG++  ADV RF   G+ M L+GE+LMRA DPA+ I +L
Sbjct:   44 LDVALKAGARVIGVNNRNLHTFEMDLATSERVAEQLTSRGLSFGHNANPMA---------EYTLCALSGMSVAADVHRFRQAGLGMCLIGESLMRAADPAQAIASL 140          
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A7S1BGG4_9STRA (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGG4_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.300e-22
Identity = 52/99 (52.53%), Postives = 65/99 (65.66%), Query Frame = 0
Query:    1 MEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRAL 99
            +++AL AGARVIGVNNRNLHTF LDL TT+R A       + +   G G       LCALSG++  ADV R+  +GV MVL+GE+LMR+ DP   IR L
Sbjct:   28 LDVALDAGARVIGVNNRNLHTFELDLGTTDRAAEQLRKRNLKFDHMGSG--DVEYALCALSGMSDAADVDRYRKVGVGMVLIGESLMRSPDPGDTIRKL 124          
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A7S3XU25_HETAK (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU25_HETAK)

HSP 1 Score: 94.4 bits (233), Expect = 1.730e-21
Identity = 52/102 (50.98%), Postives = 62/102 (60.78%), Query Frame = 0
Query:    1 MEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRALLGR 102
            M+IAL  GARVIGVNNRNLH  SLD   TE  A  A   G  W   G+        LC+LSGI    D++R+ D+G S+ LVGE LMRA DP   +R LLG+
Sbjct:   41 MDIALDVGARVIGVNNRNLHDMSLDPARTELCAARAAKRGKRWGPGGD------FALCSLSGIFSREDMERYRDVGCSLALVGEALMRAPDPRATLRELLGK 136          
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A1Z5JHZ2_FISSO (Anthranilate synthase / indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHZ2_FISSO)

HSP 1 Score: 97.8 bits (242), Expect = 1.970e-21
Identity = 49/99 (49.49%), Postives = 71/99 (71.72%), Query Frame = 0
Query:    1 MEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRAL 99
            +++AL+AGARVIGVNNRNLHTF +DLQT+ER+A      G+ ++  G  + ++ + LCALSG++   DV R+  +G+ M L+GE+LMRA DP   I+ L
Sbjct:  290 LKVALQAGARVIGVNNRNLHTFQMDLQTSERMAAFLQKEGIVYQH-GSPYNQQ-VCLCALSGMSNAMDVHRYRQVGIGMCLIGESLMRASDPVAAIQNL 386          
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: K0REG0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0REG0_THAOC)

HSP 1 Score: 97.4 bits (241), Expect = 2.640e-21
Identity = 52/101 (51.49%), Postives = 66/101 (65.35%), Query Frame = 0
Query:    1 MEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPG--EGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRAL 99
            +++AL AGARV+GVNNRNLHTF LDL  TE+VA      G+ +       G  K  + LCALSG++   DVQR+   GV M L+GE+LMRA DP+  IR L
Sbjct:  235 LDVALSAGARVLGVNNRNLHTFKLDLSQTEKVAEELARRGLAFHHDKCCSGESKPDMTLCALSGMSNSHDVQRYRTAGVGMCLIGESLMRASDPSLAIRGL 335          
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A165F4W4_EXIGL (Multifunctional tryptophan biosynthesis protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165F4W4_EXIGL)

HSP 1 Score: 97.4 bits (241), Expect = 2.750e-21
Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 0
Query:    1 MEIALKAGARVIGVNNRNLHTFSLDLQTTERVA-LVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRALLGR 102
            MEIAL+ GA++IGVNNRNLH F++D+ TT R+  ++AG              ++ ++LCALSGI GP DVQ +   GV  VLVGE LMRA DP   +R+L+GR
Sbjct:  414 MEIALQIGAKLIGVNNRNLHDFNVDMSTTTRLKDMIAG--------------RDDVILCALSGITGPEDVQAYVAQGVRAVLVGEALMRAPDPGAFVRSLIGR 502          
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A6U0SXI8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0SXI8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.520e-21
Identity = 52/100 (52.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    2 EIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRALLG 101
            EIA  AGARV+GVNNRNLHTF LD+ TT RV+      G+P+     G E  + +L ALSGI GP D+    +  V+ +LVGE LMRA DP K +++LLG
Sbjct:  225 EIAALAGARVVGVNNRNLHTFKLDMGTTPRVSATFRSLGLPF-----GGESPQRLLLALSGIMGPEDLNFGEETAVAGILVGEALMRAADPGKAVQSLLG 319          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK76_ECTSI1.580e-4371.30Bifunctional Indole-3-Glycerol Phosphate Synthase/... [more]
A0A835YVM1_9STRA7.120e-2859.22Indole-3-glycerol phosphate synthase-domain-contai... [more]
W7TZP3_9STRA9.830e-2759.63Anthranilate synthase n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7S3P4V6_9STRA1.650e-2351.89Indole-3-glycerol-phosphate synthase (Fragment) n=... [more]
A0A7S1BGG4_9STRA3.300e-2252.53Indole-3-glycerol-phosphate synthase (Fragment) n=... [more]
A0A7S3XU25_HETAK1.730e-2150.98Indole-3-glycerol-phosphate synthase (Fragment) n=... [more]
A0A1Z5JHZ2_FISSO1.970e-2149.49Anthranilate synthase / indole-3-glycerol phosphat... [more]
K0REG0_THAOC2.640e-2151.49Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A165F4W4_EXIGL2.750e-2150.49Multifunctional tryptophan biosynthesis protein n=... [more]
A0A6U0SXI8_9STRA3.520e-2152.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..111
e-value: 1.4E-26
score: 95.1
IPR013798Indole-3-glycerol phosphate synthasePFAMPF00218IGPScoord: 1..99
e-value: 1.8E-20
score: 73.2
NoneNo IPR availablePANTHERPTHR22854:SF2TRYPTOPHAN BIOSYNTHESIS PROTEIN TRPCFcoord: 2..100
NoneNo IPR availablePANTHERPTHR22854TRYPTOPHAN BIOSYNTHESIS PROTEINcoord: 2..100
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 2..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25340contigH-paniculata_contig25340:313..1101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25340.6898.1mRNA_H-paniculata_contig25340.6898.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25340 313..1122 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25340.6898.1 ID=prot_H-paniculata_contig25340.6898.1|Name=mRNA_H-paniculata_contig25340.6898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp
MEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGW
EKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRALL
GREGHSQVEKYK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR013798Indole-3-glycerol_P_synth
IPR011060RibuloseP-bd_barrel