mRNA_H-paniculata_contig25340.6898.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: D8LK76_ECTSI (Bifunctional Indole-3-Glycerol Phosphate Synthase/Phosphoribosylanthranilate Isomerase (C-terminal) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK76_ECTSI) HSP 1 Score: 166 bits (421), Expect = 1.050e-47 Identity = 82/115 (71.30%), Postives = 93/115 (80.87%), Query Frame = 1
Query: 1 QVHTDAEMEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRALLGREGHSQV 345
+VHTD EM IAL+AGARV+GVNNRNLHTF +DL+TTERVALVA GVPW+ P E W ++RIVL ALSGI GP DV+RF +GVSMVLVGETLMRA DPAK IR LLG E + V
Sbjct: 6 EVHTDEEMTIALEAGARVVGVNNRNLHTFEMDLETTERVALVAAAMGVPWQNPTESWTRDRIVLSALSGITGPEDVKRFETMGVSMVLVGETLMRAEDPAKAIRTLLGEEDPTPV 120
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A835YVM1_9STRA (Indole-3-glycerol phosphate synthase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM1_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.800e-32 Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 1
Query: 1 QVHTDAEMEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRALLGRE 330
+VHTDAEME+AL AGARVIGVN+RNLHTF LD++ T+RV+ +A G+ W G+ I L ALSGI GPA+V F GVSMVLVGETLMRA DP + IR LLG++
Sbjct: 213 EVHTDAEMEVALDAGARVIGVNSRNLHTFKLDMEATQRVSRIAAARGIRWGHRGD------IQLAALSGITGPAEVDAFRAAGVSMVLVGETLMRAADPREAIRTLLGQQ 316
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: W7TZP3_9STRA (Anthranilate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZP3_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.420e-27 Identity = 67/116 (57.76%), Postives = 80/116 (68.97%), Query Frame = 1
Query: 1 QVHTDAEMEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKER--IVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRALLGREGHSQ 342
+V+ EMEIAL AGA+V+GVNNRNLHTF LDL TTERV VA R G W++ R I L ALSGI+ ADV R+ + GVS+VLVGETLMRA DP+ +R LLG E +Q
Sbjct: 252 EVNNLREMEIALDAGAKVVGVNNRNLHTFQLDLGTTERVMEVA-------RKRGLSWDRRRGDIALAALSGISVRADVARYEEAGVSVVLVGETLMRASDPSLAVRELLGLERDAQ 360
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A7S3P4V6_9STRA (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4V6_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.540e-27 Identity = 59/113 (52.21%), Postives = 72/113 (63.72%), Query Frame = 1
Query: 1 QVHTDAEMEIALKAGARVIGVNNRNLHTFSLDLQTTERVA-------LVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRAL 318
+VH D E+++ALKAGARVIGVNNRNLHTF +DL T+ERVA L GH P LCALSG++ ADV RF G+ M L+GE+LMRA DPA+ I +L
Sbjct: 37 EVHADVELDVALKAGARVIGVNNRNLHTFEMDLATSERVAEQLTSRGLSFGHNANPMA---------EYTLCALSGMSVAADVHRFRQAGLGMCLIGESLMRAADPAQAIASL 140
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A7S1BGG4_9STRA (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGG4_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.560e-24 Identity = 54/106 (50.94%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 1 QVHTDAEMEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRAL 318
++H E+++AL AGARVIGVNNRNLHTF LDL TT+R A + + G G LCALSG++ ADV R+ +GV MVL+GE+LMR+ DP IR L
Sbjct: 21 EIHAAEELDVALDAGARVIGVNNRNLHTFELDLGTTDRAAEQLRKRNLKFDHMGSG--DVEYALCALSGMSDAADVDRYRKVGVGMVLIGESLMRSPDPGDTIRKL 124
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A1Z5JHZ2_FISSO (Anthranilate synthase / indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHZ2_FISSO) HSP 1 Score: 105 bits (263), Expect = 3.730e-24 Identity = 53/106 (50.00%), Postives = 76/106 (71.70%), Query Frame = 1
Query: 1 QVHTDAEMEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRAL 318
+VHT E+++AL+AGARVIGVNNRNLHTF +DLQT+ER+A G+ ++ G + ++ + LCALSG++ DV R+ +G+ M L+GE+LMRA DP I+ L
Sbjct: 283 EVHTTDELKVALQAGARVIGVNNRNLHTFQMDLQTSERMAAFLQKEGIVYQH-GSPYNQQ-VCLCALSGMSNAMDVHRYRQVGIGMCLIGESLMRASDPVAAIQNL 386
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A1Z5KBL2_FISSO (Anthranilate synthase / indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBL2_FISSO) HSP 1 Score: 105 bits (262), Expect = 5.100e-24 Identity = 52/106 (49.06%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 1 QVHTDAEMEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRAL 318
+VHT E++ AL+AGARVIGVNNRNLHTF +DLQT+ER+A G+ ++ + +++ LCALSG++ DV R+ +G+ M L+GE+LMRA DP I+ L
Sbjct: 283 EVHTTEELKFALQAGARVIGVNNRNLHTFQMDLQTSERMAEFLQQEGIVYQHGSP--DDQQVSLCALSGMSNAMDVHRYRQVGIGMCLIGESLMRASDPVAAIQNL 386
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: K0REG0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0REG0_THAOC) HSP 1 Score: 103 bits (256), Expect = 3.180e-23 Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 1
Query: 1 QVHTDAEMEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPG--EGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRAL 318
+VH E+++AL AGARV+GVNNRNLHTF LDL TE+VA G+ + G K + LCALSG++ DVQR+ GV M L+GE+LMRA DP+ IR L
Sbjct: 228 EVHALVELDVALSAGARVLGVNNRNLHTFKLDLSQTEKVAEELARRGLAFHHDKCCSGESKPDMTLCALSGMSNSHDVQRYRTAGVGMCLIGESLMRASDPSLAIRGL 335
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A7S3XU25_HETAK (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU25_HETAK) HSP 1 Score: 99.0 bits (245), Expect = 3.680e-23 Identity = 55/109 (50.46%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 1 QVHTDAEMEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRALLGR 327
+V T EM+IAL GARVIGVNNRNLH SLD TE A A G W G+ LC+LSGI D++R+ D+G S+ LVGE LMRA DP +R LLG+
Sbjct: 34 EVATPEEMDIALDVGARVIGVNNRNLHDMSLDPARTELCAARAAKRGKRWGPGGD------FALCSLSGIFSREDMERYRDVGCSLALVGEALMRAPDPRATLRELLGK 136
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Match: A0A448Z3F7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3F7_9STRA) HSP 1 Score: 102 bits (254), Expect = 5.950e-23 Identity = 53/107 (49.53%), Postives = 69/107 (64.49%), Query Frame = 1
Query: 1 QVHTDAEMEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPW-RTPGEGWEKERIVLCALSGIAGPADVQRFSDIGVSMVLVGETLMRAVDPAKEIRAL 318
+VH D E+E+AL+AGA+VIGVNNRNLHTF +DL+TTE VA G + + E + LC+LSG++ DV R+ I V M L+GE+LMRA DP I L
Sbjct: 228 EVHADVELEVALQAGAKVIGVNNRNLHTFQMDLETTEHVADELTKQGCSFDHSSKEAASASKYTLCSLSGMSSAFDVDRYRSINVGMCLIGESLMRAADPKAAIAGL 334 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25340.6898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25340.6898.1 >prot_H-paniculata_contig25340.6898.1 ID=prot_H-paniculata_contig25340.6898.1|Name=mRNA_H-paniculata_contig25340.6898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp MEIALKAGARVIGVNNRNLHTFSLDLQTTERVALVAGHFGVPWRTPGEGWback to top mRNA from alignment at H-paniculata_contig25340:313..1122- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25340.6898.1 ID=mRNA_H-paniculata_contig25340.6898.1|Name=mRNA_H-paniculata_contig25340.6898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=810bp|location=Sequence derived from alignment at H-paniculata_contig25340:313..1122- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25340:313..1122- >mRNA_H-paniculata_contig25340.6898.1 ID=mRNA_H-paniculata_contig25340.6898.1|Name=mRNA_H-paniculata_contig25340.6898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig25340:313..1122- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |