prot_H-paniculata_contig25263.6881.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig25263.6881.1
Unique Name	prot_H-paniculata_contig25263.6881.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	140

Homology

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BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot
Match: D7FRZ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRZ6_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 7.600e-68
Identity = 115/140 (82.14%), Postives = 127/140 (90.71%), Query Frame = 0

Query:    1 RFNPLTPVFWLATGVVAAIIATIWIVHMXXXXXXXXXXXXFLNNYFLWFDKWFPLFGVISVAVFSLYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTSPVIQFTVQALSSYLRNTEVTNLFNVQV 140
            +FNP+ P  WL  G++A+IIA +WI+H XXXXXXXXXXXX LN+YFLWFDKWFPLFGV+SVAVFS YLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGII MC +PVIQFTVQA S+YLRNT+VTN FNVQV
Sbjct:  259 KFNPVKPFAWLLFGILASIIALVWIIHXXXXXXXXXXXXXXLNDYFLWFDKWFPLFGVLSVAVFSFYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIIFMCGTPVIQFTVQAFSAYLRNTDVTNFFNVQV 398

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BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot
Match: H6WB98_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB98_VAULI)

HSP 1 Score: 191 bits (486), Expect = 5.860e-56
Identity = 88/140 (62.86%), Postives = 104/140 (74.29%), Query Frame = 0

Query:    1 RFNPLTPVFWLATGVVAAIIATIWIVHMXXXXXXXXXXXXFLNNYFLWFDKWFPLFGVISVAVFSLYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTSPVIQFTVQALSSYLRNTEVTNLFNVQV 140
            ++NPL P+FWL  G+V+AII  +WI+HM            FLN YF WFD+WFPLFG +SVA+FS YLLAA +KGCFKFGLR+VWFTLHPMK N TYMNSFLFN GIIL+C    IQF VQA SSY  + E+ N+ NVQV
Sbjct:  327 KYNPLKPIFWLCVGIVSAIIGLLWILHMILYMLIDPPATNFLNEYFNWFDQWFPLFGTVSVAIFSAYLLAAAIKGCFKFGLRIVWFTLHPMKINETYMNSFLFNVGIILLCVPAAIQFCVQAFSSYAVSAEINNILNVQV 466

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BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot
Match: A0A835Z009_9STRA (LMBR1-like membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z009_9STRA)

HSP 1 Score: 186 bits (472), Expect = 7.130e-54
Identity = 84/140 (60.00%), Postives = 104/140 (74.29%), Query Frame = 0

Query:    1 RFNPLTPVFWLATGVVAAIIATIWIVHMXXXXXXXXXXXXFLNNYFLWFDKWFPLFGVISVAVFSLYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTSPVIQFTVQALSSYLRNTEVTNLFNVQV 140
            ++NPL P+FW+  G+V+  I  +W++HM            FLN YF WFDKWFPLFG IS+ +F++YLL A VKGCFKFGLRL+WFTLHPMK N TYMNSFLFN GIILMC   VIQF+VQA S+YL + ++ + FNVQV
Sbjct:  325 KYNPLKPLFWMLVGIVSGCICVLWLIHMVVYMLATPPYALFLNAYFNWFDKWFPLFGAISIGLFAMYLLVAAVKGCFKFGLRLMWFTLHPMKLNETYMNSFLFNVGIILMCVPAVIQFSVQAFSAYLVSADINSFFNVQV 464

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BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot
Match: K3X7A6_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X7A6_GLOUD)

HSP 1 Score: 154 bits (390), Expect = 2.000e-44
Identity = 72/140 (51.43%), Postives = 90/140 (64.29%), Query Frame = 0

Query:    1 RFNPLTPVFWLATGVVAAIIATIWIVHMXXXXXXXXXXXXFLNNYFLWFDKWFPLFGVISVAVFSLYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTSPVIQFTVQALSSYLRNTEVTNLFNVQV 140
             +NPL  VF L  G +AA ++ IW+ H+            FLN YF+WFD+WFPLFG ISV +FS YLLA  VKGCFKFG+R   F LHPMK +GTYMNS LFN G++L C+ PV+QF  QA   Y R T +  +   Q+
Sbjct:   52 NYNPLVSVFKLVLGCIAAFVSAIWVFHIGLYMLPPVPLVPFLNTYFIWFDQWFPLFGTISVGIFSSYLLACAVKGCFKFGMRCFCFALHPMKLHGTYMNSMLFNLGLVLSCSIPVVQFCDQAFQDYGRLTSIRTMMGNQI 191

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BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot
Match: A0A7S1XYX2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYX2_9STRA)

HSP 1 Score: 162 bits (410), Expect = 2.130e-44
Identity = 73/140 (52.14%), Postives = 97/140 (69.29%), Query Frame = 0

Query:    1 RFNPLTPVFWLATGVVAAIIATIWIVHMXXXXXXXXXXXXFLNNYFLWFDKWFPLFGVISVAVFSLYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTSPVIQFTVQALSSYLRNTEVTNLFNVQV 140
             FNPL P   L  GV++AI++ +W++ +            FLN YF W+DKWFPLFG+ISV +F+ YL+A  VKGCFKFG+R     LHPMK NGTYMNSFLFN G++L+C+ PV+ F  +A + Y  +T+V N+FNVQV
Sbjct:  403 NFNPLVPYAMLLFGVISAILSLLWMLQIILFLLVDPPTTSFLNEYFAWYDKWFPLFGIISVCIFTFYLMACVVKGCFKFGVRCFCIELHPMKRNGTYMNSFLFNVGLLLICSLPVVHFATEAFADYAADTDVHNIFNVQV 542

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BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot
Match: A0A6G0X0P3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0P3_9STRA)

HSP 1 Score: 160 bits (405), Expect = 4.880e-44
Identity = 79/140 (56.43%), Postives = 101/140 (72.14%), Query Frame = 0

Query:    1 RFNPLTPVFWLATGVVAAIIATIWIVHMXXXXXXXXXXXXFLNNYFLWFDKWFPLFGVISVAVFSLYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTSPVIQFTVQALSSYLRNTEVTNLFNVQV 140
             FNPL PV  L  GV A II+ +WI+ +      XXXXX FLN+YF+WFDKWFPLFG +SV +F++YLL AC+KGCFKFG+R     LHPM+ NGTYMNSFLFN  +IL+C  PV+QF+ QA + Y+R T +  L  +Q+
Sbjct:  339 NFNPLVPVGKLILGVFAGIISILWILQIIVGMLPXXXXXPFLNDYFMWFDKWFPLFGTVSVGIFTMYLLMACIKGCFKFGMRCFCCALHPMEYNGTYMNSFLFNLALILLCCIPVVQFSNQAFNDYVRLTTIQTLMGIQL 478

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BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot
Match: W2YYJ2_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2YYJ2_PHYPR)

HSP 1 Score: 154 bits (389), Expect = 1.150e-43
Identity = 71/140 (50.71%), Postives = 91/140 (65.00%), Query Frame = 0

Query:    1 RFNPLTPVFWLATGVVAAIIATIWIVHMXXXXXXXXXXXXFLNNYFLWFDKWFPLFGVISVAVFSLYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTSPVIQFTVQALSSYLRNTEVTNLFNVQV 140
             FNPL P+F L  G +A++I+ +W  H+            FLN YF+WFD+WFPLFG ISV +FS YLLA  VKGCFKFG+R     LHPMK +GTYMNS +FN G++L+C  P +QF  QA + Y R T +  L  VQ+
Sbjct:  102 NFNPLKPIFKLLLGCIASVISCMWFFHIALYMLPNTPLLPFLNTYFIWFDRWFPLFGTISVGIFSTYLLACAVKGCFKFGMRCFCIALHPMKLHGTYMNSLIFNLGLVLLCAIPSVQFCDQAFADYDRLTALRTLMGVQI 241

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BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot
Match: F0W6P9_9STRA (Uncharacterized protein AlNc14C26G2535 n=2 Tax=Albugo TaxID=65356 RepID=F0W6P9_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.310e-43
Identity = 73/140 (52.14%), Postives = 94/140 (67.14%), Query Frame = 0

Query:    1 RFNPLTPVFWLATGVVAAIIATIWIVHMXXXXXXXXXXXXFLNNYFLWFDKWFPLFGVISVAVFSLYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTSPVIQFTVQALSSYLRNTEVTNLFNVQV 140
             FNPL P+F L  G + +I++ IWI+H+            FLN+YF+WFD WFPLFG IS+ VFSL+LLA  VKGCFKFG+R   F LHPM+ +GTYMNS LFN  ++L+C+ P +QF  QA   Y R T +  LF VQ+
Sbjct:  326 NFNPLIPLFKLFLGCICSIVSLIWILHIALYMLPATPLLPFLNDYFIWFDSWFPLFGTISIGVFSLFLLACSVKGCFKFGMRCFCFALHPMELHGTYMNSLLFNLALVLLCSIPAVQFCDQAFKEYGRLTAIRTLFGVQI 465

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BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot
Match: K0TCE0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TCE0_THAOC)

HSP 1 Score: 156 bits (395), Expect = 6.590e-43
Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = 0

Query:    2 FNPLTPVFWLATGVVAAIIATIWIVHMXXXXXXXXXXXXFLNNYFLWFDKWFPLFGVISVAVFSLYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTSPVIQFTVQALSSYLRNTEVTNLFNVQV 140
            +NPL P   L  G+ A +I+  W++H+            FLN YF WFD WFPLFGV+SVA+FS YLL   VKGCFKFGLR ++F +HPMK N TYM+SFLFN G++L+C  PV+QF+V A   Y R T +  + NVQ+
Sbjct:  295 YNPLIPFGSLLLGICAFVISIFWVLHIILYMLPNSPVTPFLNTYFQWFDTWFPLFGVLSVAIFSFYLLLCAVKGCFKFGLRFLFFQVHPMKINKTYMSSFLFNTGLVLLCALPVVQFSVSAFQDYARYTTINQVINVQL 433

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BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot
Match: A0A7S2LEH6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LEH6_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.820e-42
Identity = 71/140 (50.71%), Postives = 93/140 (66.43%), Query Frame = 0

Query:    1 RFNPLTPVFWLATGVVAAIIATIWIVHMXXXXXXXXXXXXFLNNYFLWFDKWFPLFGVISVAVFSLYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTSPVIQFTVQALSSYLRNTEVTNLFNVQV 140
             +NPL P+F L  G++A +I+  W++ +            FLN YF WF+ WF LFGV+SVA+FS YLL   VKGCFKFGLR ++F +HPMK N TYM+SFLFN G++L+C  PV+QF+  A   Y R T V   FNVQ+
Sbjct:  233 NYNPLIPIFSLLGGILALLISLCWVLQIILYMLPTPPVTPFLNEYFRWFETWFNLFGVLSVAIFSFYLLICAVKGCFKFGLRFLFFQVHPMKLNKTYMSSFLFNIGLVLLCALPVVQFSASAFQDYARYTTVNQTFNVQL 372

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig25263.6881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FRZ6_ECTSI	7.600e-68	82.14	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
H6WB98_VAULI	5.860e-56	62.86	Uncharacterized protein n=1 Tax=Vaucheria litorea ...	[more]
A0A835Z009_9STRA	7.130e-54	60.00	LMBR1-like membrane protein n=1 Tax=Tribonema minu...	[more]
K3X7A6_GLOUD	2.000e-44	51.43	Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4...	[more]
A0A7S1XYX2_9STRA	2.130e-44	52.14	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]
A0A6G0X0P3_9STRA	4.880e-44	56.43	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
W2YYJ2_PHYPR	1.150e-43	50.71	Uncharacterized protein n=1 Tax=Phytophthora paras...	[more]
F0W6P9_9STRA	4.310e-43	52.14	Uncharacterized protein AlNc14C26G2535 n=2 Tax=Alb...	[more]
K0TCE0_THAOC	6.590e-43	51.80	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A7S2LEH6_9STRA	1.820e-42	50.71	Hypothetical protein n=1 Tax=Skeletonema marinoi T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006876	LMBR1-like membrane protein	PFAM	PF04791	LMBR1	coord: 10..121 e-value: 1.4E-16 score: 60.5
None	No IPR available	PANTHER	PTHR31652	FAMILY NOT NAMED	coord: 2..140
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 52..73
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 101..120
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 74..100
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..51
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 121..140
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 7..32
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..6
None	No IPR available	TMHMM	TMhelix		coord: 98..120
None	No IPR available	TMHMM	TMhelix		coord: 13..35
None	No IPR available	TMHMM	TMhelix		coord: 55..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig25263	contig	H-paniculata_contig25263:2145..3341 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig25263.6881.1	mRNA_H-paniculata_contig25263.6881.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig25263 2145..3341 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig25263.6881.1 ID=prot_H-paniculata_contig25263.6881.1|Name=mRNA_H-paniculata_contig25263.6881.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=140bp
RFNPLTPVFWLATGVVAAIIATIWIVHMILYMLISPAVTPFLNNYFLWFD
KWFPLFGVISVAVFSLYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNS
FLFNCGIILMCTSPVIQFTVQALSSYLRNTEVTNLFNVQV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006876	LMBR1-like_membr_prot