prot_H-paniculata_contig2524.6878.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig2524.6878.1
Unique Name	prot_H-paniculata_contig2524.6878.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	589

Homology

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BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot
Match: A0A6H5JVV9_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVV9_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 1.040e-58
Identity = 110/124 (88.71%), Postives = 114/124 (91.94%), Query Frame = 0

Query:   12 AKYPRFGKRGAPQAFPSKLYEILEGEDPEIVGWTKTGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSEAGSYQHPHFRRGERTTLLTIRRSTKPSQALRQPSRVPGSPAS 135
            +KYPRFGKRGAPQAFPSKLYEILEGE+P+IVGWT TGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSE+GSYQHPHFRRGERTTLLTIRRSTK S A      VP SPAS
Sbjct:   48 SKYPRFGKRGAPQAFPSKLYEILEGENPDIVGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSESGSYQHPHFRRGERTTLLTIRRSTKASPAR---VAVPVSPAS 168

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BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK)

HSP 1 Score: 132 bits (332), Expect = 6.090e-30
Identity = 63/108 (58.33%), Postives = 78/108 (72.22%), Query Frame = 0

Query:   13 KYPRFGKRGAPQAFPSKLYEILEGEDPEIVGWTKTGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSEAGSYQHPHFRRGERTTLLTIRRSTKPS 120
            KYPR G+RGAPQAF  KLYEILE E  +++ W   G  F VRD  R S E+L ++F+  KF+SFQRQLNLYGFRKIT+GS+AGSY H +FR+G+   L  +RRS   S
Sbjct:    2 KYPRTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRRSQSSS 109

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BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.990e-29
Identity = 59/125 (47.20%), Postives = 81/125 (64.80%), Query Frame = 0

Query:   13 KYPRFGKRGAPQAFPSKLYEILEGEDPEIVGWTKTGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSEAGSYQHPHFRRGERTTLLTIRRSTKPSQALRQPSRVPGSPASTR 137
            KYPR G+RGAPQ FP KLYEIL  E  +I+GWT +G+ F +++     + +L ++F+  K+SSFQRQLNLYGFRK+ KG++ GSY H  F R +   L  +RR  + + A    S+ P S  S R
Sbjct:    2 KYPRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRRIPQSAGAFPSQSQPPPSTTSKR 126

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BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot
Match: A0A7S2WKC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKC6_9STRA)

HSP 1 Score: 128 bits (321), Expect = 6.060e-29
Identity = 61/113 (53.98%), Postives = 77/113 (68.14%), Query Frame = 0

Query:   13 KYPRFGKRGAPQAFPSKLYEILEGEDPEIVGWTKTGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSEAGSYQHPHFRRGERTTLLTIRRSTKPSQALRQ 125
            KYPR GKRGAPQAF  KLYEILE E  E++ W+ TGR F ++D     S+VL ++F+  K+SSFQRQLNLYGFRK TKG + G Y H +F R  R  L  +RR+ +  Q  R+
Sbjct:   72 KYPRTGKRGAPQAFAHKLYEILEAESTEVIAWSGTGRAFFIKDMDIFVSQVLLKYFRHVKYSSFQRQLNLYGFRKATKGQDVGGYYHHYFMRSRRDLLPFVRRTPQQPQTQRE 184

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BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 3.420e-28
Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = 0

Query:   13 KYPRFGKRGAPQAFPSKLYEILEGEDPEIVGWTKTGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSEAGSYQHPHFRRGERTTLLTIRR 115
            KYPR G+RGAPQ FP KLYEIL  E  +++GWT +G+ F + +     +E+L  +F+  K+SSFQRQLNLYGFRKI KG + G+Y H HF R +  +L  +RR
Sbjct:   94 KYPRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRR 196

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BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot
Match: A0A835YGA3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGA3_9STRA)

HSP 1 Score: 128 bits (321), Expect = 5.790e-28
Identity = 57/113 (50.44%), Postives = 80/113 (70.80%), Query Frame = 0

Query:   13 KYPRFGKRGAPQAFPSKLYEILEGEDPEIVGWTKTGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSEAGSYQHPHFRRGERTTLLTIRRSTKPSQALRQ 125
            +YPRFGKRGAPQAF +KL+E+L  E P+IV WT +G  F + D  + +SE L ++FK +  +SFQRQLNLYGFRK  KG ++G +QH  F+R     L+ +RR+ + SQA ++
Sbjct:   16 RYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQASQAAKR 128

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BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot
Match: A0A835Z6Z9_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z9_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.310e-27
Identity = 51/98 (52.04%), Postives = 69/98 (70.41%), Query Frame = 0

Query:   18 GKRGAPQAFPSKLYEILEGEDPEIVGWTKTGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSEAGSYQHPHFRRGERTTLLTIRR 115
            GKRGAPQAFP +LYE+L+ ED  +V W K G GF + D     +  L ++F+ +K++SFQRQ NLYGFRKIT+G +AG Y H HF++G    L+ +RR
Sbjct:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98

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BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.430e-27
Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 0

Query:   13 KYPRFGKRGAPQAFPSKLYEILEGEDPEIVGWTKTGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSEAGSYQHPHFRRGERTTLLTIRRSTKPSQALRQPSRVP 130
            +YPR GKRGAPQ FP KL+E+LE ED  ++ W + G  F ++D    + E L R+FK  KF+SFQRQLNLYGFRKI KG   G Y HPHF+R     L  +RR+ +P ++  + +  P
Sbjct:   47 RYPRTGKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAKGERCGYYVHPHFQRDHPEWLSKVRRTPQPGKSTPRSNSAP 164

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BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot
Match: D8LU68_ECTSI (Heat Shock transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU68_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 8.190e-27
Identity = 55/104 (52.88%), Postives = 76/104 (73.08%), Query Frame = 0

Query:   16 RFGKRGAPQAFPSKLYEILEGEDPEIVGWTKTGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSEAGSYQHPHFRRGERTTLLTIRRSTKP 119
            RFGKRG+ QAF   L++IL+ EDP+++GW+ +G+ F + D  +   E++ RFFKQ+K+SSFQRQLNLYGFRK+ +G+EAG Y HP F RG+   L  +RR   P
Sbjct:   42 RFGKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFP 145

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BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot
Match: A0A6H5JLW3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW3_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.230e-26
Identity = 55/106 (51.89%), Postives = 77/106 (72.64%), Query Frame = 0

Query:   16 RFGKRGAPQAFPSKLYEILEGEDPEIVGWTKTGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSEAGSYQHPHFRRGERTTLLTIRRSTKPSQ 121
            RFGKRG+ QAF   L++IL+ EDP+++GW+ +G+ F + D  +   E++ RFFKQ+K+SSFQRQLNLYGFRK+ +G+EAG Y HP F RG+   L  +RR   P +
Sbjct:   19 RFGKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEE 124

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2524.6878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JVV9_9PHAE	1.040e-58	88.71	HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc...	[more]
A0A6V1QFS1_HETAK	6.090e-30	58.33	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2BSE7_9STRA	4.990e-29	47.20	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A7S2WKC6_9STRA	6.060e-29	53.98	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2G7U9_9STRA	3.420e-28	52.43	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A835YGA3_9STRA	5.790e-28	50.44	HSF-type DNA-binding-domain-containing protein n=1...	[more]
A0A835Z6Z9_9STRA	1.310e-27	52.04	HSF-type DNA-binding-domain-containing protein (Fr...	[more]
A0A7R9YBQ9_9STRA	3.430e-27	49.15	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
D8LU68_ECTSI	8.190e-27	52.88	Heat Shock transcription factor (Partial) (Fragmen...	[more]
A0A6H5JLW3_9PHAE	1.230e-26	51.89	HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 22..116 e-value: 1.6E-22 score: 90.8
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 26..115 e-value: 1.3E-23 score: 83.4
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 19..117 e-value: 5.0E-26 score: 93.0
None	No IPR available	PANTHER	PTHR10015:SF206	HEAT SHOCK FACTOR PROTEIN	coord: 25..248
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 25..248
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 23..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2524	contig	H-paniculata_contig2524:14224..18350 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2524.6878.1	mRNA_H-paniculata_contig2524.6878.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig2524 14224..18351 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig2524.6878.1 ID=prot_H-paniculata_contig2524.6878.1|Name=mRNA_H-paniculata_contig2524.6878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=589bp
AVSSPSSTGGGAKYPRFGKRGAPQAFPSKLYEILEGEDPEIVGWTKTGRG
FEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSEAGSYQHP
HFRRGERTTLLTIRRSTKPSQALRQPSRVPGSPASTRTPSPTDCDQTPPV
TTTKTATTNTTNCTSGGSNHGSAKARPATPSPPPDPVARGVLPWSHQQPN
TLPSLPPDLREQRGLNSEGSSITSGGSGGSRGAQNGQRLDGMEVEHSAAG
AAAERRWDHRQHGGATATGRVDSVSTSMWGAEGGKGGYPNVSNGDQPDAG
RGWVGADSNQDGRRWGGEGGRSWNAVGAAATTMVRAEDGEGSAGADGGGT
VALRSRPAVVDREHERAEPLDHHDVEVVGLLQRMAKKSQDSPSRTPDRNV
EQQCATAQPPPMEPRWEEARTIPSLVSRPQPFRMPRPLVGSDPRGDGESA
VMTELLYEMLNRERESAAARGPFGYAAAGDGRAGFPHPPHARLPAPFSTV
VPDSSGGCRGVLPSHMEAFGSVAHRGGVSALVESSVGTSDRLPLLSQDQH
HEHHHPVPVGVVAYNGIPGDDRRSFESSSNSNSLKGLKR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000232	HSF_DNA-bd
IPR036388	WH-like_DNA-bd_sf
IPR027725	HSF_fam
IPR036390	WH_DNA-bd_sf