prot_H-paniculata_contig25217.6866.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25217.6866.1
Unique Nameprot_H-paniculata_contig25217.6866.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
BLAST of mRNA_H-paniculata_contig25217.6866.1 vs. uniprot
Match: D7FLU3_ECTSI (Radical SAM core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLU3_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 9.720e-22
Identity = 43/47 (91.49%), Postives = 47/47 (100.00%), Query Frame = 0
Query:    1 RNVVVNLIPYNPTYAPGSEEFKEPTEEALQKFKSIVHDHGLLVTIRR 47
            RNV+VNLIPYNPTYAPGSEEFKEPTEEALQKF++IVH+HGLLVTIRR
Sbjct:  366 RNVLVNLIPYNPTYAPGSEEFKEPTEEALQKFRAIVHEHGLLVTIRR 412          
BLAST of mRNA_H-paniculata_contig25217.6866.1 vs. uniprot
Match: A0A7S3YU32_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YU32_9EUKA)

HSP 1 Score: 50.4 bits (119), Expect = 7.810e-6
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 RNVVVNLIPYNPTYAPGSEEFKEPTEEALQKFKSIVHDHGLLVTIR 46
            RN+V+NLIPYNPT  P  E+++ P  E ++ F +IV + G+L T+R
Sbjct:  406 RNLVLNLIPYNPTDVP--EDYRAPARERVKAFHTIVREAGILTTVR 449          
BLAST of mRNA_H-paniculata_contig25217.6866.1 vs. uniprot
Match: A0A7C3SAI7_9BACT (Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3SAI7_9BACT)

HSP 1 Score: 48.1 bits (113), Expect = 5.060e-5
Identity = 21/47 (44.68%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    5 VNLIPYNPTYAPGSEEFKEPTEEALQKFKSIVHDHGLLVTIRRRENS 51
            VNLIPYNPT     +EF+ P+E A+++F+ I+ D G+ VT+R    +
Sbjct:  269 VNLIPYNPTV----DEFERPSESAIERFRQILADKGIPVTVRHERGT 311          
BLAST of mRNA_H-paniculata_contig25217.6866.1 vs. uniprot
Match: A0A7S1VED2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VED2_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 9.340e-5
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 RNVVVNLIPYNPTYAPGSEEFKEPTEEALQKFKSIVHDHGLLVTIRR 47
            RN++VNLIPYNPT     +  + P E  L +F+SIV  +G++ TIRR
Sbjct:  134 RNILVNLIPYNPTNV--KDVLQCPPESHLLEFRSIVASYGVMTTIRR 178          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25217.6866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FLU3_ECTSI9.720e-2291.49Radical SAM core domain-containing protein n=2 Tax... [more]
A0A7S3YU32_9EUKA7.810e-647.83Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7C3SAI7_9BACT5.060e-544.68Probable dual-specificity RNA methyltransferase Rl... [more]
A0A7S1VED2_9STRA9.340e-548.94Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..50
e-value: 8.9E-8
score: 33.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25217contigH-paniculata_contig25217:3375..3527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25217.6866.1mRNA_H-paniculata_contig25217.6866.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25217 3375..3527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25217.6866.1 ID=prot_H-paniculata_contig25217.6866.1|Name=mRNA_H-paniculata_contig25217.6866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
RNVVVNLIPYNPTYAPGSEEFKEPTEEALQKFKSIVHDHGLLVTIRRREN
S
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM