mRNA_H-paniculata_contig11057.686.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11057.686.1
Unique NamemRNA_H-paniculata_contig11057.686.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig11057.686.1 vs. uniprot
Match: D8LML3_ECTSI (Imidazole glycerol phosphate synthase hisHF n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LML3_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 1.980e-120
Identity = 185/247 (74.90%), Postives = 207/247 (83.81%), Query Frame = 1 
Query:   10 AFAIIQTAVPHIGWNGLCLLKDHAFTREFDQTEDAVYFVHSFRATLTPDNRDWVLSTTTYGG-TGEEEEHFISSIQKGNITACQFHPEKSGKVGLKLLGAFLRSIE----GGLCPNESSTSTTD--IAKTPSKTQLVKRVVACLDVRSNDKGDLVVTKGDQYDVREAGSGSENGRGDVRNLGKPVELAGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDTGK 729
            +F   +TAVPHIGWNGLC+ K+H F  +FD   DAVYFVHSFRAT TP+N +WVLSTTTYGG  GE  EHFISS+QKGN+TACQFHPEKSGKVGL+LLGAFL S+     GG+    S  S+     A+    T+LVKR+VACLDVRSND+GDLVVTKGDQYDVREAG+  + G+GDVRNLGKPVEL+GRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDD+GK
Sbjct:  127 SFDPAKTAVPHIGWNGLCVRKEHPFVDDFDTDGDAVYFVHSFRATSTPENEEWVLSTTTYGGGAGEPPEHFISSVQKGNVTACQFHPEKSGKVGLRLLGAFLDSVGKGKMGGVSAEGSGNSSGGGGSARGNEDTKLVKRIVACLDVRSNDQGDLVVTKGDQYDVREAGT--QEGKGDVRNLGKPVELSGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDSGK 371
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BLAST of mRNA_H-paniculata_contig11057.686.1 vs. uniprot
Match: A0A835ZC23_9STRA (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC23_9STRA)

HSP 1 Score: 268 bits (685), Expect = 2.750e-83
Identity = 145/237 (61.18%), Postives = 174/237 (73.42%), Query Frame = 1 
Query:   25 QTAVPHIGWNGLCLLKDHAFTREFDQTEDAVYFVHSFRATLTPDNRDWVLSTTTYGGTGEEEEHFISSIQKGNITACQFHPEKSGKVGLKLLGAFL--RSIEGGLCPNESSTSTTDIAKTPSKTQLVKRVVACLDVRSNDKGDLVVTKGDQYDVREAGSGSENGRGDVRNLGKPVELAGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDTGK 729
            Q +VPHIGWNG    +        D+ +D VYFVHS+RA  T  N+DWVLSTTTYG  G  E  FIS++QKGN+ ACQFHPEKSG VGLKLL +FL  R ++GG      S +   +A+   +T L KR+VACLDVR+ND GDLVVTKGDQY VRE  +  +  +G VRNLGKPVEL+ RYY EGADE+ FLNITSFRQ VLDD PML+VLE ASE++FVPLTVGGGIR++TD  G+
Sbjct:  118 QVSVPHIGWNGAIQHRRSHVIDSLDK-DDVVYFVHSYRALPTAANKDWVLSTTTYGEPGASE--FISAVQKGNVVACQFHPEKSGGVGLKLLESFLKDRGVDGG------SQAPVPVAEGV-RTVLRKRLVACLDVRTNDAGDLVVTKGDQYAVREEATDGQT-KGVVRNLGKPVELSERYYREGADEITFLNITSFRQEVLDDAPMLQVLEKASEKIFVPLTVGGGIRAYTDGNGR 343
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BLAST of mRNA_H-paniculata_contig11057.686.1 vs. uniprot
Match: K0SBJ6_THAOC (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBJ6_THAOC)

HSP 1 Score: 266 bits (681), Expect = 1.320e-82
Identity = 142/245 (57.96%), Postives = 172/245 (70.20%), Query Frame = 1 
Query:   25 QTAVPHIGWNGLCLLKDHAFTR-------EFDQTEDAVYFVHSFRATLTPDNRDWVLSTTTYGGTGEEEEHFISSIQKGNITACQFHPEKSGKVGLKLLGAFLRSIEGGLCPNESSTSTTDIAKTPSK-TQLVKRVVACLDVRSNDKGDLVVTKGDQYDVREAGSGSENGRGDVRNLGKPVELAGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTD-DTGKV 732
            + +VPHIGWNG+  L+D    R       E       VYFVHS+ A +T +N  WVL+ TTY G     + ++SS+Q+GN+ A QFHPEKSG  GL  +  FL S+E G   N     T  I   P + TQLVKRVV  LDVRSND GDLVVTKGDQYDVRE    ++ GRG VRNLGKPV+LA RYYEEGADE+ FLNITSFRQGV++D+PML+VLE AS+ +FVPLTVGGGIRS+TD ++GKV
Sbjct:  128 KRSVPHIGWNGVVRLQDSPAMRYVSGASGESSGGGGEVYFVHSYYAPITSENEKWVLTRTTYEG-----QEYVSSVQRGNVCATQFHPEKSGAAGLNFIRGFLESVEDGTLSN-----TKPIPNNPDEHTQLVKRVVVALDVRSNDSGDLVVTKGDQYDVREKDEDAKTGRGGVRNLGKPVQLASRYYEEGADEIAFLNITSFRQGVIEDMPMLQVLEEASKCIFVPLTVGGGIRSYTDPESGKV 362
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BLAST of mRNA_H-paniculata_contig11057.686.1 vs. uniprot
Match: A0A7S3LEJ1_9STRA (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEJ1_9STRA)

HSP 1 Score: 263 bits (672), Expect = 2.020e-81
Identity = 140/238 (58.82%), Postives = 176/238 (73.95%), Query Frame = 1 
Query:    7 LAFAIIQTAVPHIGWNGLCLLKDHAFTREFDQTEDAVYFVHSFRATLTPDNRDWVLSTTTYGGTGEEEEHFISSIQKGNITACQFHPEKSGKVGLKLLGAFLRSIEGGLCPNESSTSTTDIAKTPSKTQLVKRVVACLDVRSNDKGDLVVTKGDQYDVREAGS-GSENGRGDVRNLGKPVELAGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTD 717
            ++F   + AVPHIGWNG  L K+ A  +   + E+A YFVHS+ A LT +N++WVL++TTY G     + FIS++Q+G + A QFHPEKSG  GLK+L  FL ++E G     S T +  I  + S TQLVKR+V  LDVR+ND GDLVVTKGDQYDVRE    G   GRG VRNLGKPV LAGRYY+EGADE+ FLNITSF++GV++D+PML+VLE AS+ +FVPLTVGGGIRS+TD
Sbjct:  115 ISFDSSKMAVPHIGWNGRILHKESAALQYIGKDEEA-YFVHSYYAPLTEENKEWVLTSTTYEG-----QPFISAVQRGAVVATQFHPEKSGATGLKVLKGFLEAVENGTL---SQTKSLQIDPSAS-TQLVKRIVVALDVRTNDHGDLVVTKGDQYDVRENHKEGVVEGRGGVRNLGKPVALAGRYYQEGADEIAFLNITSFKKGVIEDMPMLQVLEEASKNIFVPLTVGGGIRSYTD 342
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BLAST of mRNA_H-paniculata_contig11057.686.1 vs. uniprot
Match: A0A7S3XYZ3_HETAK (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYZ3_HETAK)

HSP 1 Score: 263 bits (672), Expect = 3.860e-81
Identity = 140/239 (58.58%), Postives = 166/239 (69.46%), Query Frame = 1 
Query:   13 FAIIQTAVPHIGWNGLCLLKDHAFTREFDQTEDAVYFVHSFRATLTPDNRDWVLSTTTYGGTGEEEEHFISSIQKGNITACQFHPEKSGKVGLKLLGAFLRSIEGGLCPNESSTSTTDIAKTPSKTQLVKRVVACLDVRSNDKGDLVVTKGDQYDVREAGSGSENGRGDVRNLGKPVELAGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDTGK 729
            F   Q +VP IGWNG+   K         + E  VYFVHSFRA +T  N+DWVL++TTYGG+     ++IS++QKGNI A QFHPEKSG+ GLK+  AFL S  G L P  +           + T + KRV+ACLDVRSND GDLVVTKGDQYDVRE G G + G+G VRNLGKPV L  RYY++GADEV FLNITSFRQ V+ DLPML+VLE +SE VFVPLTVGGGIR + D  G 
Sbjct:  146 FDSTQCSVPSIGWNGVLKHKQSEIVAPIGEHE-LVYFVHSFRALMTEANKDWVLTSTTYGGS-----NYISAVQKGNILATQFHPEKSGQTGLKIFEAFL-SRAGQLDPEPTPIE----VPADATTAIAKRVIACLDVRSNDAGDLVVTKGDQYDVREEGDGDQGGKGQVRNLGKPVALCARYYQDGADEVTFLNITSFRQCVIGDLPMLQVLEKSSETVFVPLTVGGGIRDYEDGEGN 373
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BLAST of mRNA_H-paniculata_contig11057.686.1 vs. uniprot
Match: A0A7S2W7Z7_9STRA (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W7Z7_9STRA)

HSP 1 Score: 261 bits (668), Expect = 5.780e-81
Identity = 139/232 (59.91%), Postives = 167/232 (71.98%), Query Frame = 1 
Query:   25 QTAVPHIGWNGLCLLKDHAFTREFDQTEDAVYFVHSFRATLTPDNRDWVLSTTTYGGTGEEEEHFISSIQKGNITACQFHPEKSGKVGLKLLGAFLRSIEGGLCPNESSTSTTDIAKTPSKTQLVKRVVACLDVRSNDKGDLVVTKGDQYDVRE-AGSGSENGRGDVRNLGKPVELAGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTD 717
            + AVPHIGWNG    ++    +  DQ ED VYFVHS+ A +T  N DW L++TTY      ++ FISS+QKG+I ACQFHPEKSGK GL++L  FL +++     N +ST   D+    S+T+LVKR+V  LDVR ND GDLVVTKGDQYDVRE    G   GRG VRNLGKPV LA RYY EGADE+ FLNITSFRQGV+ D+PML+VLE AS  +FVPLTVGGGIRS+ D
Sbjct:  108 KMAVPHIGWNGRINHQESPVFKYVDQQED-VYFVHSYYAPITERNSDWALTSTTYS-----DQRFISSVQKGSIVACQFHPEKSGKTGLRVLKGFLEAVQNQTLSN-TSTIAVDVT---SQTKLVKRLVVALDVRQNDHGDLVVTKGDQYDVRENEKEGVLQGRGGVRNLGKPVSLAARYYTEGADEIAFLNITSFRQGVIQDMPMLQVLEEASRSIFVPLTVGGGIRSYKD 329
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BLAST of mRNA_H-paniculata_contig11057.686.1 vs. uniprot
Match: A0A7S1D2S3_CYCTE (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2S3_CYCTE)

HSP 1 Score: 261 bits (668), Expect = 1.060e-80
Identity = 140/239 (58.58%), Postives = 167/239 (69.87%), Query Frame = 1 
Query:   25 QTAVPHIGWNGLCLLKDHAFTREFDQTEDAVYFVHSFRATLTPDNRDWVLSTTTYGGTGEEEEHFISSIQKGNITACQFHPEKSGKVGLKLLGAFLRSIEGGLCPNESSTSTTDIAKTPSKTQLVKRVVACLDVRSNDKGDLVVTKGDQYDVRE-AGSGSENGRGDVRNLGKPVELAGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDTGKVQY 738
            + AVPHIGWNG  L ++      +   +D VYFVHS+ A L P N +WVL++TTY G     + F+SS+Q+G + A QFHPEKSG  GL  L  FL SIE     ++  T+T     T   TQLVKRVV  LDVR+ND GDLVVTKGDQYDVRE    G   GRG VRNLGKPV LAGRYY+EGADE+ FLNITSFRQGV++D+PML+VLE AS+ +FVPLTVGGGIRS+TD      Y
Sbjct:  130 KMAVPHIGWNGRTLHQESPVL-SYVAPDDDVYFVHSYYAPLIPQNSEWVLTSTTYEG-----QRFVSSVQRGCVVAAQFHPEKSGVTGLNFLKGFLESIEN----DKLGTATHLTVHTNVPTQLVKRVVVALDVRTNDDGDLVVTKGDQYDVRENEKEGVVTGRGGVRNLGKPVALAGRYYKEGADEIAFLNITSFRQGVIEDMPMLQVLEQASKSIFVPLTVGGGIRSYTDPDSGTTY 358
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BLAST of mRNA_H-paniculata_contig11057.686.1 vs. uniprot
Match: A0A1Z5JNI2_FISSO (Imidazole glycerol phosphate synthase hisHF n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNI2_FISSO)

HSP 1 Score: 259 bits (662), Expect = 6.390e-80
Identity = 138/232 (59.48%), Postives = 169/232 (72.84%), Query Frame = 1 
Query:   25 QTAVPHIGWNGLCLLKDHAFTREFDQTEDAVYFVHSFRATLTPDNRDWVLSTTTYGGTGEEEEHFISSIQKGNITACQFHPEKSGKVGLKLLGAFLRSIEGGLCPNESSTSTTDIAKTPSKTQLVKRVVACLDVRSNDKGDLVVTKGDQYDVRE-AGSGSENGRGDVRNLGKPVELAGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTD 717
            +  VPHIGWNG  +L   +   E    +D VYFVHSF A +T +N++WVLS+TTY     E+E FIS++QKG + A QFHPEKSG  GLK++ AFL ++E G      ST   +I +T + T L KRVV  LDVR+ND GDLVVTKGDQYDVRE    G   GRG VRNLGKPV LA RYY+EG DE+ FLNITSFRQGV++D+PML+VLE AS+ +FVPLTVGGGIRS++D
Sbjct:  120 KMTVPHIGWNGR-ILHQQSPVFENVNNDDDVYFVHSFYAPVTAENKEWVLSSTTY-----EDERFISAVQKGCVVATQFHPEKSGPTGLKVMRAFLEAVENGTL---GSTKPLEIDETAT-THLTKRVVVALDVRTNDHGDLVVTKGDQYDVRENQKEGVVTGRGGVRNLGKPVALASRYYQEGGDEIAFLNITSFRQGVIEDMPMLQVLEEASKNIFVPLTVGGGIRSYSD 341
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BLAST of mRNA_H-paniculata_contig11057.686.1 vs. uniprot
Match: A0A6V2PL02_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PL02_9STRA)

HSP 1 Score: 253 bits (647), Expect = 8.520e-80
Identity = 136/239 (56.90%), Postives = 166/239 (69.46%), Query Frame = 1 
Query:   31 AVPHIGWNGLCLLKDHAFTREFDQTEDAVYFVHSFRATLTPDNRDWVLSTTTYGGTGEEEEHFISSIQKGNITACQFHPEKSGKVGLKLLGAFLRSIEGGLCPNESSTSTTDIAKTPSKTQLVKRVVACLDVRSNDKGDLVVTKGDQYDVRE--AGSGSENG-RGDVRNLGKPVELAGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDTGKVQY 738
            AVPHIGWNG  +    +      + +D VYFVHS+   +  +N+DW+L++TTYG      + ++SS+QKG + A QFHPEKSG  GL +   FL++ E G   N SS          S+T LVKRVV  LDVRSND+GDLVVTKGDQYDVRE     G  +G RG VRNLGKPV LA RYY+EGADE+ FLNITSFRQGV+DDLPML+VLE +S+ +FVPLTVGGGIRS+TD    V Y
Sbjct:  126 AVPHIGWNGR-IPHQSSPVLSTSEEKDEVYFVHSYYVPIIEENKDWILTSTTYGN-----QRYVSSVQKGCVVATQFHPEKSGTTGLNIFKNFLQAAEKGTLSNTSSLP----IDPSSQTSLVKRVVVALDVRSNDQGDLVVTKGDQYDVRENERREGLSSGARGGVRNLGKPVSLAKRYYDEGADEIAFLNITSFRQGVIDDLPMLQVLEESSKSIFVPLTVGGGIRSYTDSEHGVTY 354
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BLAST of mRNA_H-paniculata_contig11057.686.1 vs. uniprot
Match: A0A2D4BM05_PYTIN (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM05_PYTIN)

HSP 1 Score: 258 bits (659), Expect = 1.510e-79
Identity = 140/244 (57.38%), Postives = 166/244 (68.03%), Query Frame = 1 
Query:   13 FAIIQTAVPHIGWNGLCLLKDHAFTREFDQ--------TEDAVYFVHSFRATLTPDNRDWVLSTTTYGGTGEEEEHFISSIQKGNITACQFHPEKSGKVGLKLLGAFLRSIEGGLCPNESSTSTTDIAKTPSKTQLVKRVVACLDVRSNDKGDLVVTKGDQYDVREAGSGSENGRGDVRNLGKPVELAGRYYEEGADEVCFLNITSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDD 720
            F     AVPHIGWNGL + K  A      Q        T   VYFVHSFRAT T  N DWVL+TT YG     +  FISS+Q+GN+ A QFHPEKSG VG+ ++  FL ++ G +   +   +  D A  P+ TQL KRV+ACLDVR+ND+GDLVVTKGDQYDVRE   G E G   VRN+GKPVEL  RYY EGADEV FLNI SFR+  ++D+PML+VLE +SERVFVPLTVGGGIR + DD
Sbjct:  107 FPTDAVAVPHIGWNGLKVWKKSALWAHLPQLQAEADVDTTTKVYFVHSFRATRTAQNEDWVLTTTHYG-----DYEFISSVQRGNVMATQFHPEKSGTVGIAIIKGFLENL-GSM--GDHDVAFADAASRPA-TQLSKRVIACLDVRTNDEGDLVVTKGDQYDVRETNDGGEGGH--VRNMGKPVELCERYYAEGADEVAFLNICSFREQPIEDMPMLQVLEASSERVFVPLTVGGGIREYVDD 339
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11057.686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LML3_ECTSI1.980e-12074.90Imidazole glycerol phosphate synthase hisHF n=2 Ta... [more]
A0A835ZC23_9STRA2.750e-8361.18Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
K0SBJ6_THAOC1.320e-8257.96Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A7S3LEJ1_9STRA2.020e-8158.82Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A7S3XYZ3_HETAK3.860e-8158.58Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A7S2W7Z7_9STRA5.780e-8159.91Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A7S1D2S3_CYCTE1.060e-8058.58Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
A0A1Z5JNI2_FISSO6.390e-8059.48Imidazole glycerol phosphate synthase hisHF n=2 Ta... [more]
A0A6V2PL02_9STRA8.520e-8056.90Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A2D4BM05_PYTIN1.510e-7957.38Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11057contigH-paniculata_contig11057:171..7395 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.1
Seed ortholog evalue6.6e-99
Seed eggNOG ortholog2880.D8LML3
Preferred nameHIS7
KEGG rclassRC00010,RC00074,RC01190,RC01943
KEGG koko:K01493,ko:K01663
KEGG ReactionR01663,R04558
KEGG Pathwayko00240,ko00340,ko01100,ko01110,ko01230,map00240,map00340,map01100,map01110,map01230
KEGG ModuleM00026,M00429
Hectar predicted targeting categoryother localisation
GOsGO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0004359,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0016787,GO:0016810,GO:0016811,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.imidazoleglycerol-phosphate synthase activity
EggNOG OGsCOG0107@1,KOG0623@2759
Ec32 ortholog descriptionImidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Ec32 orthologEc-05_003160.1
EC3.5.4.12
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02044
Exons6
Model size750
Cds size750
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11057.686.1prot_H-paniculata_contig11057.686.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11057 171..7395 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928813.134655-CDS-H-paniculata_contig11057:170..3191622928813.134655-CDS-H-paniculata_contig11057:170..319Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 171..319 +
1691480629.8489945-CDS-H-paniculata_contig11057:170..3191691480629.8489945-CDS-H-paniculata_contig11057:170..319Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 171..319 +
1622928813.152135-CDS-H-paniculata_contig11057:1789..19221622928813.152135-CDS-H-paniculata_contig11057:1789..1922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 1790..1922 +
1691480629.8613176-CDS-H-paniculata_contig11057:1789..19221691480629.8613176-CDS-H-paniculata_contig11057:1789..1922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 1790..1922 +
1622928813.1896548-CDS-H-paniculata_contig11057:3280..34261622928813.1896548-CDS-H-paniculata_contig11057:3280..3426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 3281..3426 +
1691480629.8725455-CDS-H-paniculata_contig11057:3280..34261691480629.8725455-CDS-H-paniculata_contig11057:3280..3426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 3281..3426 +
1622928813.204721-CDS-H-paniculata_contig11057:4828..49571622928813.204721-CDS-H-paniculata_contig11057:4828..4957Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 4829..4957 +
1691480629.8802955-CDS-H-paniculata_contig11057:4828..49571691480629.8802955-CDS-H-paniculata_contig11057:4828..4957Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 4829..4957 +
1622928813.2237298-CDS-H-paniculata_contig11057:6778..68661622928813.2237298-CDS-H-paniculata_contig11057:6778..6866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 6779..6866 +
1691480629.8875816-CDS-H-paniculata_contig11057:6778..68661691480629.8875816-CDS-H-paniculata_contig11057:6778..6866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 6779..6866 +
1622928813.24276-CDS-H-paniculata_contig11057:7290..73951622928813.24276-CDS-H-paniculata_contig11057:7290..7395Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 7291..7395 +
1691480629.895199-CDS-H-paniculata_contig11057:7290..73951691480629.895199-CDS-H-paniculata_contig11057:7290..7395Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11057 7291..7395 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11057.686.1

>prot_H-paniculata_contig11057.686.1 ID=prot_H-paniculata_contig11057.686.1|Name=mRNA_H-paniculata_contig11057.686.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp
VLLAFAIIQTAVPHIGWNGLCLLKDHAFTREFDQTEDAVYFVHSFRATLT
PDNRDWVLSTTTYGGTGEEEEHFISSIQKGNITACQFHPEKSGKVGLKLL
GAFLRSIEGGLCPNESSTSTTDIAKTPSKTQLVKRVVACLDVRSNDKGDL
VVTKGDQYDVREAGSGSENGRGDVRNLGKPVELAGRYYEEGADEVCFLNI
TSFRQGVLDDLPMLKVLELASERVFVPLTVGGGIRSHTDDTGKVQYGTT*
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mRNA from alignment at H-paniculata_contig11057:171..7395+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11057.686.1 ID=mRNA_H-paniculata_contig11057.686.1|Name=mRNA_H-paniculata_contig11057.686.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7225bp|location=Sequence derived from alignment at H-paniculata_contig11057:171..7395+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTCTCTTGGCTTTTGCCATAATCCAGACTGCCGTTCCCCATATCGGATG
GAACGGACTGTGTCTGCTGAAGGACCACGCCTTCACGCGTGAGTTTGACC
AGACCGAAGATGCTGTTTACTTCGTGCACAGCTTCCGGGCTACCCTCACG
TAAGTCTCGTAAGCTCTAGCGCCTACATGCTTGCCATATCGCTCGGTACA
CAGGCAGCCAGAATATTCTGTTTTTTGTGGAGATGAGGGAGACGTTGTGC
ACAGAGCCATGAGCACTGCGCTACGATTTATGTATGCACAAGAATCAAGA
GTAAGGAACATTGGTCTGTAAAGAGTAATGTGGAGGACGGCAGGTGAGGG
CACATACCTGTTAATATTATTCGATATTTTAGACCAGGAAGAAACTTCTT
CTCGGGTACTGGTACCTATAGTAGCGGACCTTCTTGTCTAAGCTTTTCGC
ACGACGTTTTTCTTTTTTTTTTAACCCCCGGAAGGCTAAGGCAAAAACCT
TTATCCGATGCTTCCATAATTCAAGTATTTCTACCGAAGTATTTCTACAA
TTCCTTTAACAGAACAGAGTTATTTATTCCTCTGCGGGGTAGGCGCCACC
CCCGTTCGGCCGAAAACCAAGTAAGCAGTGTGGAGGTTGTACCCACTAAA
AGACCTCTGACTACACTTCCAGCGCACGACGGTTCTATCATGACGTCCCC
ATCAATTTTTACCCGACCGATGTATCCGAATCTCCGATCGATGTATCTGA
ATCTGAGCTGCCGGAGAGAATAACGCGCAGCTCAGACGCCTATGCGTTGC
TGTCAAGGGTAGAGCTAGTGTAGGACGTAGGGTGAAGAATGAGACTCGCA
TCCACTAAAACCCATCAGGCATTCATAGTAGTGTGCGAGTTCAAGTTAGT
AGATGGCTATATCATGTCCGACATCATTGGAGAATGACCGAAGAAGCGCG
TGGCAGTCGTGCTTCAGCTTCTTATGGTGCCGCGAAGTCACCTCTCATAC
ATAGTCTTGACATGCTGCTCAAAGTGCTTGACGAAAGTGACCCTAAACTA
GACTCTTGGTTAAGTAATCCCGTCGAGTCGAAATCAATGTTCACCGTACC
TACCGATGTAATATTTTAACCCATGGTTGAAGCACCCAGAGATTTTTGCT
ACGCCTGCTCTCAGTCCGGTTTTGCGCACGAAAAGCACCATCTAGGATGA
ACATGTGCTTTTTTTCCCACCAACGTTAGCAACGAACCTGCTCTCTCATT
ATTAAAATGTTCCCAAAAAAGGCCATCATGTATATATCAGGTATCCAACA
TAAGTATCGACACACGTGCCGTGGATATATACCGTCGTACGTGAAAAGCT
GGAATGTAATGTGCCATGATCGAGGAATCAGCATTGCCGAGTTAGCTTGC
GAAGCTGTACGTTCATGAGACCTACAGAGCCCGATCAGTACTTGGAATTA
TACCGATTTTTGTAATGTAGCCTTCCAAATTGTGCCCGATAGACATACCA
CCTACCACTGCCCACCAACACCAACACCAACACCAACACCACCACCAACG
TGAGAGGTTACTAACTTTTCAGACTGCTCGTTTGGTGGGGGATGATATCC
TCGACAACCGTGATATTAGGCCCGACAATCGTGACTGGGTGCTGAGCACG
ACTACGTACGGTGGGACAGGAGAAGAAGAGGAACATTTCATTTCGTCAAT
CCAAAAAGGGAACATCACGGCGTGCCAGTTTCACCCAGAAAAAAGCGGAA
AGGTGAGGAGGTTGTACTCGCGTTTGTTTGGTTATTTCAGATTTTGGCGG
ACCATTTTAACAGTGGCATAAACACAATGGAAAAATGGAGAATGGCACAC
ACATACCATGTTGGCATTTTTTTTTTTTTTTTTTGCTGTCTCCTTGTTGG
CTATTAAATAGCGTCCTAGTGGACAGGTCACAGCTACGCCAGTGACGGTG
GCTACGTCGACGATATTGCGGTACTTGTAAACAGCCCGAGAACACGGACT
CGCTGCGGTCGCGGTGACTCGCTTGCACTCCTCTTCATGTAGATGCATTC
AACCTTCTAGCTTCACGCTATATATACGGGCTCGCTGCGCACGCAGTGGT
TTGCTCGCCCTCACACGTATATTATATTTATATAAACACATTGCAGAGTA
ATAGCTTTGCGAATTTCGAGAGGTGTCCTGTTACAGCAGAAATGTGGGCA
GGTAACGTTCAACATTGTACACAGACCCACTTTCATTGTATAGTCTCATA
AAGATACCCATCATGGGAGGTGCAGATACGGAATATGGACATTGAAATAT
GGAACTGCACTGGATGGAAGGCTACATGTACCGACGGTCTTTAGCGGTGG
AGTTGTTCAGGTTTACGCCCTGCCAAGAAGCTCTCTTCACAAGCTCTCTT
CACACCCTCTTTACCGCTGGGCTGTCTCTCCCACCCTATGCCCTATAGAC
AGCCTCGGCACGTACAGACGTGCTGTTCCCACTCGTATGTCTGCTCTAAG
CCTCTATGACAGCCACCATGATAAAAGCGTGCAAGACAAGAGTGAAAAAT
ATTCAACATGTACGGTCTGAATTGTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTACA
AAGACGTGTCCCCATGGGCGTGCGCCTCTGTTGAACTGCCCTGCCGTTTG
GTCGCCGCTATCTGTCGTTATTCCTGTGTGGTGCACTGCATGACTGAGCT
GTCGGTCTGTCTGTCTGCTATTTGGTGGACTGGGCGTGATGACCATGTAG
AGCTGACCGTTTAGGCATGTTATCTTTATATTAAATTCCTAGACTTAGTC
GAGCTGAGAGTACTTTTTTTCGGCTGTTAGCAAGATGGAAAACAGTAGTC
TAGATTCTGCGTGTTGAATTTACTTGAGTTGAAAATCGAAAAAGAGTTCC
GAAACAAGCAATGTCTTAGCCTGTTATATTCTTAGGATACAGTAGCATCA
ACACAATTAATGTAACGGAGAATATGGGGAACGAAACGTCTAATGGTTGA
TTCACTTTTTCATGTTTTTCTCTATTTGGTCTGTTTCGTGTTTCATGTTC
CATGTTTCAGGTTGGTCTCAAGCTTCTAGGGGCGTTTCTGCGGTCGATAG
AAGGAGGTCTTTGTCCGAATGAGTCATCCACCAGCACGACGGATATTGCG
AAGACGCCTTCCAAGACGCAACTGGTTAAGCGGGTGGTCGCCTGCCTTGA
TGTCCGGTAAGATAGCTGATCATCTTATCATGTATTTATTTTCGCGGCAG
GGTTTACGTTATCGGCCTCATTTTCCCAGAATGATTTGTTTTTGCATCAT
ATCCCAACATTCTGATATTGATGCGTGTAGTTGTCTTGTGGATGCGGAGA
AACATAAAAAGGAATTATATATTTATTTATTTATATAGAGTATATAGCGA
ATAGTACAATTGATGAGACCACCCCATATCGGGGGAGTTTAATCGAGATA
ATAGTTTTTCAATGCTGTCATTTTTGTTGGGGAGAAAATAACATAGAAGA
ACAACGTGCAAGTTACTATAGCCAAGCCCGGACAAAAACATGAGTGAGAA
ATAAAGACATTCGAACGTTATGCATGTTCTACCACGGCCAGGTGTCCACG
GAACCCGTCTGATAGTTAATGCTGTTGCGGGTGGGCTTTGGCGTAGGTTT
GTCGGTCTCCAGATCAAACAATGTATACATAGATGCTGTATGTGATGAGC
CTGTTCCGCGTAGCGTGGTTTGAGGTGGGCGGGATGGGCTATGGGTATTC
AAGATTGTAGCCATAGTTATCCATGACAACGGCGGTAGCATGAGACAATT
TTGCGGCAAGAGCTGAACGTCGCTACCGTGGCTCAGCGATGGGGATCTAG
TTGCTCCTCTTGCAAGGCTATAGTCCCACGGCTATCTATCACCTTGACTT
GGTGTGTCTAGCTTGGCTGTGTCGACGGCAGCGTGTAATGTGTGACAGCG
GTAATAGTCAGTGTTCAATTTCGTCTGTGACAAATGTGAGATGTGGCAAG
TGCGTGCTGCATAATGCTGCATCATGTGTGCCCCCCCAAAAGCGAGGTAA
ACTCAATGGGGGGGATTTTCACCTACTTGGGCCGTTTGATGGAGTCTGAT
GAAATTGGGATCTTCCGCGCCAAGAGTCATACTCCAGCAATGCTCGATGG
CAAGGACATATTGTACGCCCTGGACAAATACGAATAAACGACACGAGTAA
ATACGAGAAATCTGGAACGAATACTGTATCTGTAAACGAATATTGCGTGT
TTACTCCAGACAAATAATGATAGTTCCGAGATAGTTGCGAATGCTCCATA
CGTATTTGTCCGGGGGGTGAAATATTGCGTCATGCTGGCTGCATGTGTTC
TTTTGGTCTCTCTGGTCTCTCTAGCTTTTTTGTTGAAACCGCCCGCTGCC
CGTCGGTAAGATATGCATGTAGCGTCAACAAAACGAATCTTTCCGGGCAT
CGGTCCCTCCATGCGAGCACAGCAAGCCGGGGTATCGAGGTATACAGGTC
AAAAATGGACGAGATAGGCGTAGCCGTGGCTGTACGACTAGAAGCATGTA
CAGCCAAGAAACAGTTAACGCATGTAACTTACGTAGTGTAGTATGGTTTC
TCGTGCAGGTCCAACGACAAGGGCGATCTGGTGGTGACGAAGGGAGACCA
GTATGATGTCAGGGAGGCAGGAAGCGGGAGCGAGAACGGGCGAGGAGACG
TGAGAAATCTCGGCAAACCTGTTGAGCTCGCCGGAAGGTATATTTTCGAA
GTAGAGTACGGTGGGTGGGTACATGGGTACCCCAGTTCCATGTGGGGGTA
CATAGGTATGTACTATTTGCTAGTAGCCAAGATGGGCCGCCTTTATTTCC
GGACCATCATGTCTTTATTTATTATACATTGCATACTTGGGTCGTTAGTG
CTGAGCGGAGTTGACCCGTCTTTTAAGTAGTTTTGCTGTTGATATGACGT
ACTTGAATCGAGGTAATTATTGTGCCTGAAGATTTCCAAAAAACACGACA
AATATACGGTACTCGTGTTACTACGCCCAACGCGCCAATGATGTAGGGTA
GGACCTTCACTGCATGAACCGTTGCGATATTTTTGTTTACTTTAACAGAT
CGTCCATGACCAAAGTTCTGCGTTTGGTAGGGGTACAGTGGAAGGGATAG
CAATTAACGCCATTGATTCAGTTGATTTTTTATGACTTTTGATAACTTTT
GATGACTTTTGATGATTTTCACGTGAATAAGATTTCGATTGTAATCGTTT
CAACCGATTTTGCAAGTTTCGAAGTCTGTTCGACGTGTATTTTATGTACT
TTCTACTTTGCACTATTGCCAATCTTTGGTGAGACGTTAAGTATAGCTAT
TTTTTATTGTTATTGCACAAGTGTGGACGAAATAGTTTATCCTGTCTTGT
CCTTGTACCGATTTTGTGGGCATTTTGGTGATTTTTTTTACCATTTTATC
ATATTTGGAGGGAATTACCCCCAAACAAGTTCCAGGGGTCTTTCGCACGC
CGATTTAAGGAGCTTTATCATGACTGTTTTGGAAGATGATCGCATGGTAC
GTACTAGTCATAGGGGATTCTAGTGTTGGTTGGCCTGCTCGATTGTTTTT
GGGGCGTTGTGGGATTTAAACGGATCTTTGAACCGGAAAATCACGAAAAT
GCCCTTCAAGTCGCAATCAGAAACAAAACAAGCCAAGCGCGGCATCAATG
GCAACCTCCTTCATACTAACGATGCGCTCATCTCAGAATTTCAAGTCCTT
ACTCCCATGGGATCATGAGCGTGATAAGCCTGCAAATTAATAGTTTACGC
TAAGCCTATAAAAAATATTTATTGGTAAGTTTTATTCGCTTGTGATTTTG
TGGGGGAGCGTGTCCATGCATGATCGAAGTTGCCTGTCTATAGATTGACA
CCTGTCGACGACATGTGTCTCACAACAGTAGTTTTCAAGGCCACCAGCGC
GGTACAATAGCAGTAGCACTAGCACTAGCACTAGCACTAGAATTCGAGGG
AAATTAGGGTGACCAAACAAATTTTCATCATCGTGAAGCCATGAACTGGG
TATAATTCTCCCTACGAAGGCATTGACGCTACGTGTATTTCATTGTTTTG
GAGTACCGTAGAGTCACTCAGTCCACTACTTGAGACTCGACCCATGGCAT
TGTTATTTGTTAGATGGCAAGCTGTCGGTAGAGGAAGACATTGTCTCGTG
ACGTTTAATCAATCGTGGGTCACCAATATATGCAATTGGGCGTTTCTCGG
ACTTGAGATGGGGAGTGGCGATACCAGCATCGTTACAGCGGTCGTTCTCA
ATGCCTCATTACGAACGGGCGAAGTGTTGCTGGTGTTGTGTGTCTTGCTT
GTGGTAGGAAAGCGCATGGATATAGCATGTATCGGGAGGACAGAATACGA
GTCATGTTAAAGCTAGATCACCTACTATACGAGGGAAGATTTTCGATCGT
TCATTCTCGTACCTTGTTTCTGTTCACGACAGACTCACGATAGGGAGGCA
GCGTTCACCGATATCACGCGTTGTGTGTTTGCGTGTGTGTGTGTGTGTGT
GTGTTCAGATACTACGAGGAGGGCGCAGACGAAGTCTGTTTCTTGAATAT
TACCTCCTTCCGACAAGGTGTCCTGGATGACCTCCCCATGCTCAAGGTGA
ATCGTGGGCTTTTTATGCTTGGTCTGGGCTAGTTTTTGTTGGAAGTGCTC
GTCGTTAACATATATTTATATATATATATAAGTAACTATACTTCCGTTGT
GCCATAAGTAACGTCGGTTGTCTTTAACAAATTCTAACTACAGTTGATGT
CAATGGTTTTTAAGTGCTTTTATTATAGTTTTTTTTTTTTTTTCAAGGTT
TGTTGTGGAGTTCGACCCTCGGCTTTGTCGATTCCTGGTGTTTCGTTGCT
ATCATCATTTCGTTACAATATGAATGTATCTATACCTTCGCACTGTTCTC
GTTGAACGATCAAATAGACCTGCCTGTTTGCCTGTTTGTCTGTCTGCCTG
TCTGCCGTCTGCCGTTTTTGCTGTTGTACATCTTCCATCTGCTTCATGCT
TAAACCGCATGGCACCGTAGGTATTAGAGCTGGCGTCGGAGCGGGTATTC
GTTCCTCTTACAGTGGGTGGAGGTATTCGAAGCCACACGGACGACACCGG
AAAGGTACAGTACGGCACAACGTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig11057:171..7395+

>mRNA_H-paniculata_contig11057.686.1 ID=mRNA_H-paniculata_contig11057.686.1|Name=mRNA_H-paniculata_contig11057.686.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at H-paniculata_contig11057:171..7395+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTCTCTTGGCTTTTGCCATAATCCAGACTGCCGTTCCCCATATCGGATG
GAACGGACTGTGTCTGCTGAAGGACCACGCCTTCACGCGTGAGTTTGACC
AGACCGAAGATGCTGTTTACTTCGTGCACAGCTTCCGGGCTACCCTCACG
TTCTCTTGGCTTTTGCCATAATCCAGACTGCCGTTCCCCATATCGGATGG
AACGGACTGTGTCTGCTGAAGGACCACGCCTTCACGCGTGAGTTTGACCA
GACCGAAGATGCTGTTTACTTCGTGCACAGCTTCCGGGCTACCCTCACGC
CCGACAATCGTGACTGGGTGCTGAGCACGACTACGTACGGTGGGACAGGA
GAAGAAGAGGAACATTTCATTTCGTCAATCCAAAAAGGGAACATCACGGC
GTGCCAGTTTCACCCAGAAAAAAGCGGAAAGGCCCGACAATCGTGACTGG
GTGCTGAGCACGACTACGTACGGTGGGACAGGAGAAGAAGAGGAACATTT
CATTTCGTCAATCCAAAAAGGGAACATCACGGCGTGCCAGTTTCACCCAG
AAAAAAGCGGAAAGGTTGGTCTCAAGCTTCTAGGGGCGTTTCTGCGGTCG
ATAGAAGGAGGTCTTTGTCCGAATGAGTCATCCACCAGCACGACGGATAT
TGCGAAGACGCCTTCCAAGACGCAACTGGTTAAGCGGGTGGTCGCCTGCC
TTGATGTCCGGTTGGTCTCAAGCTTCTAGGGGCGTTTCTGCGGTCGATAG
AAGGAGGTCTTTGTCCGAATGAGTCATCCACCAGCACGACGGATATTGCG
AAGACGCCTTCCAAGACGCAACTGGTTAAGCGGGTGGTCGCCTGCCTTGA
TGTCCGGTCCAACGACAAGGGCGATCTGGTGGTGACGAAGGGAGACCAGT
ATGATGTCAGGGAGGCAGGAAGCGGGAGCGAGAACGGGCGAGGAGACGTG
AGAAATCTCGGCAAACCTGTTGAGCTCGCCGGAAGGTCCAACGACAAGGG
CGATCTGGTGGTGACGAAGGGAGACCAGTATGATGTCAGGGAGGCAGGAA
GCGGGAGCGAGAACGGGCGAGGAGACGTGAGAAATCTCGGCAAACCTGTT
GAGCTCGCCGGAAGATACTACGAGGAGGGCGCAGACGAAGTCTGTTTCTT
GAATATTACCTCCTTCCGACAAGGTGTCCTGGATGACCTCCCCATGCTCA
AGATACTACGAGGAGGGCGCAGACGAAGTCTGTTTCTTGAATATTACCTC
CTTCCGACAAGGTGTCCTGGATGACCTCCCCATGCTCAAGGTATTAGAGC
TGGCGTCGGAGCGGGTATTCGTTCCTCTTACAGTGGGTGGAGGTATTCGA
AGCCACACGGACGACACCGGAAAGGTACAGTACGGCACAACGTAGGTATT
AGAGCTGGCGTCGGAGCGGGTATTCGTTCCTCTTACAGTGGGTGGAGGTA
TTCGAAGCCACACGGACGACACCGGAAAGGTACAGTACGGCACAACGTAG
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