prot_H-paniculata_contig2520.6859.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2520.6859.1
Unique Nameprot_H-paniculata_contig2520.6859.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1400
Homology
BLAST of mRNA_H-paniculata_contig2520.6859.1 vs. uniprot
Match: D8LRE2_ECTSI (DEAD domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE2_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 4.090e-36
Identity = 103/269 (38.29%), Postives = 146/269 (54.28%), Query Frame = 0
Query:  101 LPEALLAPLE-EEVEMSGPTTLLQANILSEGRTGASLLVQDRSGAETTVAFAMLLLKQLLDRGLVSAGMQPWEGCKD------------------ETGEEKXXXXXXXXXXXXXXXXXXXXKKAAGQNQRQLHAVVLARNKEIAVNVTETIGRLGQC-IPGLELITLVGGVPVAENVRTLKNGCHIAVGTPGRVRYLMGKGALQSATVRTLSLDSADFLMAPVFQEDVDWIAGKLPESKQVLAFSTADTS-AIKPALSALVCVPELRTL 348
            LP AL   LE EEV++    T LQA++ SE R GA LL++ +SG ETT A A+L+L +L+     +    P    K                    T                          + G  + QL A+VL +N+E+A  V +T+ RLG+  +P L + +LVGG+ V+EN +TL  GCH+A+GTPGRV++L+ KG L + T R L L+SAD+LMAPVF EDVD++  + PE KQV+  ST   S A +  L  ++ VP L+ L
Sbjct:    3 LPPALQKSLEAEEVQV----TPLQASVWSEARAGADLLIEAKSGPETTTALAVLVLDRLVAAISSAEAALPRYARKRTSSFSGLSGLNRIVSSVLRTTSSNNNGNSNVKDGESDLSTANGSSGSGGLLKPQLCALVLTKNREVAAGVKDTLLRLGKTSVPNLTIASLVGGIAVSENAQTLSAGCHVAIGTPGRVKFLIDKGVLVADTGRLLVLESADWLMAPVFMEDVDYVVRRFPEEKQVVLSSTVKPSVAFEEGLCEILGVPALKRL 267          
BLAST of mRNA_H-paniculata_contig2520.6859.1 vs. uniprot
Match: A0A6H5KMB9_9PHAE (DEAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB9_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 5.500e-36
Identity = 81/124 (65.32%), Postives = 95/124 (76.61%), Query Frame = 0
Query: 1015 LVRLGRGIPKLSVATLVGGTPVAEQSKALAGG-CHVAVGTPGRVRFWMKKGVLRPHSA-KTLVLDSADWLMAAVFEEDVAWIAGKFPMDKQVLAFSGADPRVIEEGLRELVNSPHMTSIGGNAG 1136
            L RLG GIP LSVATL+GG PV+E  KALAGG C+V VGTPGRV+F +K+G LR  +A +TLVLDSADWLMA VF +DV WIA  FP DKQVLAFSGADP   + GL  LV+S  MT +G ++G
Sbjct:    2 LTRLGEGIPSLSVATLIGGVPVSENHKALAGGGCNVVVGTPGRVKFLIKEGTLRVSAAARTLVLDSADWLMAPVFHDDVGWIARNFPKDKQVLAFSGADPATYKAGLTALVDSSGMTPVGVSSG 125          
BLAST of mRNA_H-paniculata_contig2520.6859.1 vs. uniprot
Match: D8LRE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE3_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 4.870e-27
Identity = 76/144 (52.78%), Postives = 88/144 (61.11%), Query Frame = 0
Query:  905 IPAVLLAALEADDFRVPTALQASVWSAGRGEYRADLLVHGLPGDETITAYVILILERVWLRYPPPVDPRTAPAWDTDVKEELAADSPAP---------------LDLQALVLTRTRDMAAVVTNALVRLGRGIPKLSVATLVGG 1033
            IPA LLA+L+A+   +PT LQ SVWS GRG  R DLLVH  PGDET TAY + +LERV  RYP P+        D     E AA +PAP                ++ ALVLTRTRDMA+ VT  L RLG GIP LSVATL+GG
Sbjct:   17 IPAELLASLDANGVTLPTPLQESVWSIGRGAGREDLLVHARPGDETATAYCVPVLERVLERYPQPL------CGDC----EQAARAPAPSGGGGAACTGADREKYEVVALVLTRTRDMASDVTTMLTRLGEGIPSLSVATLIGG 150          
BLAST of mRNA_H-paniculata_contig2520.6859.1 vs. uniprot
Match: A0A6H5KKW2_9PHAE (DEAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW2_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 8.510e-24
Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = 0
Query: 1013 NALVRLGRG-IPKLSVATLVGGTPVAEQSKALAGGCHVAVGTPGRVRFWMKKGVLRPHSAKTLVLDSADWLMAAVFEEDVAWIAGKFPMDKQVLAFSGADPRV-IEEGLRELVNSPHMTSI 1131
              L+RLG+  +P L++A+LVGG  VAE ++ L+ GCHVA+GTPGRV+F + KGVL P + + LVL+SADWLMA VF EDV ++  +FP +KQV+  S   P V  EEGL E++  P +  +
Sbjct:    2 ETLLRLGKSSVPNLTIASLVGGIAVAENARTLSAGCHVAIGTPGRVKFLIDKGVLVPDTGRLLVLESADWLMAPVFMEDVDYVVRRFPEEKQVVLSSTVKPSVAFEEGLCEILGVPALKRL 122          
BLAST of mRNA_H-paniculata_contig2520.6859.1 vs. uniprot
Match: R7TPR2_CAPTE (RNA helicase n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TPR2_CAPTE)

HSP 1 Score: 110 bits (275), Expect = 2.370e-22
Identity = 83/274 (30.29%), Postives = 128/274 (46.72%), Query Frame = 0
Query:   74 MTGSTSTIKRDYPPEL--LASEQTIDELGLPEALLAPLEEEVEMSG--PTTLLQANILSEGRTGASLLVQDRSGAETTVAFAMLLLKQLLDRGLVSAGMQPWEGCKDETGEEKXXXXXXXXXXXXXXXXXXXXKKAAGQNQRQLHAVVLARNKEIAVNVTETIGRLGQCIPGLELITLVGGVPVAENVRTLKNGCHIAVGTPGRVRYLMGKGALQSATVRTLSLDSADFLMAPVFQEDVDWIAGKLPESKQVLAFSTADTSAIKPALSALVCVP 343
            M  + S  K D  P    + S +T+D  GL   L AP+ + ++ +G    + +Q   +  GR G  L+VQ +SG   T  FA++ L+ L+                                                 +   L  +V+A  +EIAV + E +  LG  +P L   T +GG+PV++++  LK  CHIAVGTPGR++ L+  G + + ++R   LD AD LM   FQE V+WI   LP++KQ+LA S      +   L+A +C P
Sbjct:    1 MASAQSAHKIDQKPRTHDVLSGETVDFPGL--LLSAPVLKGLKEAGFERPSPIQLKTIPLGRCGLDLIVQAKSGTGKTCVFAVIALESLI------------------------------------------------LDTNALQVLVIAPTREIAVQIWEVMKTLGAAMPQLRCYTFIGGLPVSDDIPKLKK-CHIAVGTPGRLKQLIENGHMNTDSIRLFVLDEADKLMDDSFQESVNWIYSCLPDTKQMLALSATYPEVLAQHLTAYMCNP 223          
BLAST of mRNA_H-paniculata_contig2520.6859.1 vs. uniprot
Match: A0A356HGE6_9BURK (ATP-dependent RNA helicase DbpA (Fragment) n=1 Tax=Cupriavidus sp. TaxID=1873897 RepID=A0A356HGE6_9BURK)

HSP 1 Score: 102 bits (254), Expect = 4.530e-21
Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = 0
Query:  991 PAPLDLQALVLTRTRDMAAVVTNALVRLGRGIPKLSVATLVGGTPVAEQSKALAGGCHVAVGTPGRVRFWMKKGVLRPHSAKTLVLDSADWLMAAVFEEDVAWIAGKFPMDKQVLAFSGADP 1112
            P PLD+QALVL  TR++A  VT  + RL R    + V TL GG+P+  Q ++LA G HV VGTPGR+   + +G L   +  TLVLD AD ++   F +D+A+IA   P D+Q L FS   P
Sbjct:   60 PRPLDVQALVLCPTRELADQVTQEIRRLARAEDNVKVLTLSGGSPIRPQVESLAHGAHVVVGTPGRIIDHLDRGSLNIDAINTLVLDEADRMLDMGFHDDIAFIASHAPKDRQTLLFSATYP 181          
BLAST of mRNA_H-paniculata_contig2520.6859.1 vs. uniprot
Match: A0A482XCB1_LAOST (RNA helicase n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482XCB1_LAOST)

HSP 1 Score: 107 bits (268), Expect = 6.910e-21
Identity = 53/122 (43.44%), Postives = 76/122 (62.30%), Query Frame = 0
Query:  209 NQRQLHAVVLARNKEIAVNVTETIGRLGQCIPGLELITLVGGVPVAENVRTLKNGCHIAVGTPGRVRYLMGKGALQSATVRTLSLDSADFLMAPVFQEDVDWIAGKLPESKQVLAFSTADTS 330
            + R+L  +VLA  +EIA  +   +  +G   PGL ++ L+GG+P+ ++   L  GCHI VGTPGRVR+ +  G ++ + VR   LD AD LM P F++D++ I G LP SKQVL  S   TS
Sbjct:   91 DSRRLQTLVLAPTREIANQIKFVVEAIGSQFPGLSVVPLIGGLPLQKDRERLMEGCHIVVGTPGRVRHCIELGLIELSAVRLFVLDEADMLMTPSFKDDINAIFGNLPSSKQVLVCSATYTS 212          
BLAST of mRNA_H-paniculata_contig2520.6859.1 vs. uniprot
Match: A0A482IZ73_9BURK (ATP-dependent RNA helicase DbpA n=19 Tax=Burkholderiaceae TaxID=119060 RepID=A0A482IZ73_9BURK)

HSP 1 Score: 105 bits (263), Expect = 5.710e-20
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 0
Query:  991 PAPLDLQALVLTRTRDMAAVVTNALVRLGRGIPKLSVATLVGGTPVAEQSKALAGGCHVAVGTPGRVRFWMKKGVLRPHSAKTLVLDSADWLMAAVFEEDVAWIAGKFPMDKQVLAFSGADPRVIEEGLRELVNSPHMTSI 1131
            P PLD+QALVL  TR++A  VT  + RL R    + V TL GG+P+  Q ++L  G HV VGTPGR+   + +G L   +  TLVLD AD ++   F +D+A+IA   P D+Q L FS   P  I++     +  P    +
Sbjct:   71 PRPLDVQALVLCPTRELADQVTQEIRRLARAEDNVKVLTLSGGSPIRPQVESLVHGAHVVVGTPGRIIDHLDRGSLNIDAINTLVLDEADRMLDMGFHDDIAFIASHAPKDRQTLLFSATYPAAIDKLAHRFLRQPKTVKV 211          
BLAST of mRNA_H-paniculata_contig2520.6859.1 vs. uniprot
Match: C1E4C7_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E4C7_MICCC)

HSP 1 Score: 103 bits (256), Expect = 1.060e-19
Identity = 73/221 (33.03%), Postives = 103/221 (46.61%), Query Frame = 0
Query:  913 LEADDFRVPTALQASVWSAGRGEYRADLLVHGLPGDETITAYVILILERVWLRYPPPVDPRTAPAWDTDVKEELAADSPAPLDLQALVLTRTRDMAAVVTNALVRLGRGI--PKLSVATLVGGTPVAEQSKALAGGCHVAVGTPGRVRFWMKKGVLRPHSAKTLVLDSADWLMAAVFEEDVAWIAGKFPMDKQVLAFSGADPRVIEEGLRELVNSPHMTSI 1131
            L    F +P+ +Q +    GR    ADL+V    G      +  ++ ERV                           S  P   QALVL  TR++A    +AL +L R +  P L VA  +GG PVA+   ALA GC + VGTPGRVR  +++G + P   +TLV+D AD L+   FE DV ++    P  KQV+AFS   P      +  +  SP   ++
Sbjct:    8 LNLSGFTIPSPVQRAAIPLGR--LGADLVVQAKSGTGKTVTFGAILCERV------------------------DRSSAYP---QALVLAPTREVALQSRDALAKLARALDPPALRVACFLGGLPVADDRAALASGCQLCVGTPGRVRQLLEEGSMAPGGIRTLVIDEADALVGGAFEHDVLFVHSMLPERKQVMAFSATYPSRTLARIETMTRSPQRVAM 199          
BLAST of mRNA_H-paniculata_contig2520.6859.1 vs. uniprot
Match: A0A8B8AYH0_CRAVI (RNA helicase n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8AYH0_CRAVI)

HSP 1 Score: 107 bits (266), Expect = 1.310e-19
Identity = 52/113 (46.02%), Postives = 75/113 (66.37%), Query Frame = 0
Query:  213 LHAVVLARNKEIAVNVTETIGRLGQCIPGLELITLVGGVPVAENVRTLKNGCHIAVGTPGRVRYLMGKGALQSATVRTLSLDSADFLMAPVFQEDVDWIAGKLPESKQVLAFS 325
            L  +VLA  +EIA+ + + I  +GQCIP L+  T +GG+P+ E+ + LK  CHIAVGTPGR++ L+    + + +VR   LD AD L+   FQE ++WI   LPE+KQ+LA S
Sbjct:   96 LQVLVLAPTREIAIQIWDVISSIGQCIPSLKCHTFIGGMPLTEDKQKLKK-CHIAVGTPGRMKQLIESNIMNTDSVRMFVLDEADKLLEESFQEQINWIYSTLPENKQMLALS 207          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2520.6859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRE2_ECTSI4.090e-3638.29DEAD domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5KMB9_9PHAE5.500e-3665.32DEAD domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LRE3_ECTSI4.870e-2752.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKW2_9PHAE8.510e-2450.41DEAD domain-containing protein n=1 Tax=Ectocarpus ... [more]
R7TPR2_CAPTE2.370e-2230.29RNA helicase n=1 Tax=Capitella teleta TaxID=283909... [more]
A0A356HGE6_9BURK4.530e-2145.90ATP-dependent RNA helicase DbpA (Fragment) n=1 Tax... [more]
A0A482XCB1_LAOST6.910e-2143.44RNA helicase n=1 Tax=Laodelphax striatellus TaxID=... [more]
A0A482IZ73_9BURK5.710e-2040.43ATP-dependent RNA helicase DbpA n=19 Tax=Burkholde... [more]
C1E4C7_MICCC1.060e-1933.03Uncharacterized protein (Fragment) n=1 Tax=Micromo... [more]
A0A8B8AYH0_CRAVI1.310e-1946.02RNA helicase n=2 Tax=Crassostrea virginica TaxID=6... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 533..560
NoneNo IPR availableCOILSCoilCoilcoord: 1189..1216
NoneNo IPR availableGENE3D3.40.50.300coord: 901..1132
e-value: 1.9E-28
score: 101.1
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 994..1133
coord: 99..332
NoneNo IPR availablePANTHERPTHR24031:SF627ATP-DEPENDENT RNA HELICASE DBPAcoord: 994..1133
coord: 99..332
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 115..364
e-value: 0.0048
score: 19.7
coord: 917..1143
e-value: 0.011
score: 14.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 127..346
score: 11.836
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 931..1129
score: 11.729
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 984..1109
e-value: 8.4E-11
score: 41.9
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 122..326
e-value: 4.5E-13
score: 49.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 89..331
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 900..1130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2520contigH-paniculata_contig2520:5735..20661 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2520.6859.1mRNA_H-paniculata_contig2520.6859.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2520 5719..20948 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2520.6859.1 ID=prot_H-paniculata_contig2520.6859.1|Name=mRNA_H-paniculata_contig2520.6859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1400bp
MVWPFPNSGIGAKTPSPSNRFRTVAPVNHIDAESSESASEVERGRSVSSV
SDSVEEEEQEEVEEESQRKTIASMTGSTSTIKRDYPPELLASEQTIDELG
LPEALLAPLEEEVEMSGPTTLLQANILSEGRTGASLLVQDRSGAETTVAF
AMLLLKQLLDRGLVSAGMQPWEGCKDETGEEKKDSEKSGGGGGFFGKRSS
EHKKAAGQNQRQLHAVVLARNKEIAVNVTETIGRLGQCIPGLELITLVGG
VPVAENVRTLKNGCHIAVGTPGRVRYLMGKGALQSATVRTLSLDSADFLM
APVFQEDVDWIAGKLPESKQVLAFSTADTSAIKPALSALVCVPELRTLCT
AASSASVGDPGEQDGAVAVAGGERSGGGDAGADADSGETSDTAAAAAEEI
DDEDDDKFDEEVLSPVPLKKKLISMPSPGAVARAADVSAAAEKFLKLTRR
STISGGIGGGRRLSSIGRSKTAGVKATKGEAGTAAANTRSSVGGSARSHS
KEIQQPAKFKTKKGKKGKGKGNEAEEETEPAAAAAAATVLEEEEEEEEEV
EAEVEAEVYISGVERKKEVEMVGAAAADAPADAAAAADTLAADSRKNENG
DYLTVATSMSFTSLTSTVNCTPSPPSLRLRAQRAARAAQVALATQTPVLG
PPTLAPCSPIPGPGSSHSSEATTTESGCRSEDSSATSAGPTSQSAPVGDG
VAEVGEVREQGADTIISHAPVDSDGETAKDSENIWRPTSGGPDSEPGRGG
VVQQSGSLNVRDCDGTDTEAKVSSRRSGGSGSVLGNEADTAAADQEALDL
LSPGSFRKDPAEEGEEVTASDDPLLSAAEVAAVAVMEAATLSGRGASSPS
LSGKNRVKRAEGGSERGTEEIVVREKDVSEYLEEQQQKQLNVLAATMDLL
EGWGIPAVLLAALEADDFRVPTALQASVWSAGRGEYRADLLVHGLPGDET
ITAYVILILERVWLRYPPPVDPRTAPAWDTDVKEELAADSPAPLDLQALV
LTRTRDMAAVVTNALVRLGRGIPKLSVATLVGGTPVAEQSKALAGGCHVA
VGTPGRVRFWMKKGVLRPHSAKTLVLDSADWLMAAVFEEDVAWIAGKFPM
DKQVLAFSGADPRVIEEGLRELVNSPHMTSIGGNAGSSGAEAEAETGARR
ESSSSQIATIQEVDDEEEAAALEHMEALAAIENERAVAAAAAAAAVAHAE
RELRAAEEELRATIVQGESNNGDCAVSPEAAAEAAMAAVARGAPDGSSLR
ARQGGYRQVQDGQHQGGELAVIRNTGFGAVKLTASGKAAVGVFEGLSGAR
PGGHYDDYTGGSRGGMMIRRRAMTNVGRSGFGSGGNYDVRPPLGSSLSRE
IVPTPTSRGVGAAVGGATFRSRVRLSRENQLYGAWCRQSIGGVGAGSRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase