prot_H-paniculata_contig252.6858.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig252.6858.1
Unique Nameprot_H-paniculata_contig252.6858.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
BLAST of mRNA_H-paniculata_contig252.6858.1 vs. uniprot
Match: D8LCK6_ECTSI (Protein transport protein SEC23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCK6_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 3.540e-61
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0
Query:    1 MDHWDVRSAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLSYDPIRCNGNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENI 101
            M+ WDV  AEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPL+YDPIRCNG  CGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENI
Sbjct:    1 MEVWDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNG--CGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENI 99          
BLAST of mRNA_H-paniculata_contig252.6858.1 vs. uniprot
Match: A0A7S2Y1K9_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K9_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.150e-55
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0
Query:    1 MDHWDVRSAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLSYDPIRCNGNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENI 101
            M+ WD  +AEERD  RFSWNVWPSSRLEATRIVVPVGCLYTP+K   + PPPL+YDPIRCNG  CGAILNPY Q+DFM+KLW CPFCMQRNHF PHYAENI
Sbjct:    1 MEGWDWGAAEERDGARFSWNVWPSSRLEATRIVVPVGCLYTPLKRLENMPPPLAYDPIRCNG--CGAILNPYCQIDFMTKLWCCPFCMQRNHFLPHYAENI 99          
BLAST of mRNA_H-paniculata_contig252.6858.1 vs. uniprot
Match: A0A7S4D7Q8_HETAK (Protein transport protein SEC23 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7Q8_HETAK)

HSP 1 Score: 175 bits (444), Expect = 9.920e-54
Identity = 75/101 (74.26%), Postives = 84/101 (83.17%), Query Frame = 0
Query:    1 MDHWDVRSAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLSYDPIRCNGNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENI 101
            M+ WDV +AEERD  RFSWNVWPSS+LEATRIVVP+GCLYTP+K     PP L+YDPIRCNG  CG ILNP+ Q+DF +KLW CPFC QRNHFPPHYAENI
Sbjct:    1 MEGWDVHAAEERDGARFSWNVWPSSKLEATRIVVPLGCLYTPLKKIEGMPPALAYDPIRCNG--CGGILNPFCQIDFRTKLWVCPFCQQRNHFPPHYAENI 99          
BLAST of mRNA_H-paniculata_contig252.6858.1 vs. uniprot
Match: A0A835YT42_9STRA (Protein transport protein SEC23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT42_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.430e-48
Identity = 75/98 (76.53%), Postives = 83/98 (84.69%), Query Frame = 0
Query:    4 WDVRSAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLSYDPIRCNGNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENI 101
            WD++  EERD VRFSWNVWPSS+LEATRIVVP GCLY+P+K     PP L+YDPIRCNG  CGAILNPYAQ+D+ SKLW CPFCM RNHFPPHYAENI
Sbjct:   10 WDLQGNEERDGVRFSWNVWPSSKLEATRIVVPTGCLYSPLKRLEGMPPALAYDPIRCNG--CGAILNPYAQIDYRSKLWACPFCMNRNHFPPHYAENI 105          
BLAST of mRNA_H-paniculata_contig252.6858.1 vs. uniprot
Match: A0A7S3HKU0_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKU0_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.270e-47
Identity = 68/101 (67.33%), Postives = 78/101 (77.23%), Query Frame = 0
Query:    1 MDHWDVRSAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLSYDPIRCNGNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENI 101
               WD    E+RD +R SWN WPSSR+EATRIVVP+GCLY+P+K   + P  L+YDPIRCNG  C A+LNPY QVDF +KLWTCPFC  RNHFPPHYAENI
Sbjct:    2 QQQWDFHGPEQRDGIRNSWNTWPSSRIEATRIVVPLGCLYSPLKRIENMPGSLAYDPIRCNG--CTAVLNPYVQVDFRTKLWTCPFCTGRNHFPPHYAENI 100          
BLAST of mRNA_H-paniculata_contig252.6858.1 vs. uniprot
Match: A0A8J2WHU7_9STRA (Protein transport protein SEC23 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WHU7_9STRA)

HSP 1 Score: 164 bits (414), Expect = 5.270e-45
Identity = 74/101 (73.27%), Postives = 84/101 (83.17%), Query Frame = 0
Query:    1 MDHWDVRSAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLSYDPIRCNGNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENI 101
            MD   +++ EERD VR SWNVWPSSRLEATRIVVP+G LYTP+K   + PPPL YDPIRCNG  CGA+LNPY Q+DF +KLWTCPFC+ RNHFPPHYAENI
Sbjct:    1 MDMSSIQAQEERDGVRLSWNVWPSSRLEATRIVVPIGALYTPLKPIGN-PPPLVYDPIRCNG--CGALLNPYCQLDFRTKLWTCPFCLGRNHFPPHYAENI 98          
BLAST of mRNA_H-paniculata_contig252.6858.1 vs. uniprot
Match: W7U0J5_9STRA (Protein transport protein SEC23 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0J5_9STRA)

HSP 1 Score: 150 bits (379), Expect = 8.740e-45
Identity = 65/92 (70.65%), Postives = 72/92 (78.26%), Query Frame = 0
Query:   10 EERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLSYDPIRCNGNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENI 101
            EE+D +R SW VWPSSR+E TRIVVPV  LYTP++     P PL YDPIRCNG  CG +LNPY  VDF SK+WTCPFCM RNHFPPHYAENI
Sbjct:   26 EEKDGLRMSWGVWPSSRIEVTRIVVPVAGLYTPLRRIETMPAPLEYDPIRCNG--CGGVLNPYCSVDFRSKVWTCPFCMNRNHFPPHYAENI 115          
BLAST of mRNA_H-paniculata_contig252.6858.1 vs. uniprot
Match: F0XWM5_AURAN (Protein transport protein SEC23 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWM5_AURAN)

HSP 1 Score: 163 bits (412), Expect = 1.030e-44
Identity = 73/101 (72.28%), Postives = 84/101 (83.17%), Query Frame = 0
Query:    1 MDHWDVRSAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLSYDPIRCNGNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENI 101
            MD   +++ EERD VR SWNVWPSSRLEATRIV+P+G LYTP+K   + PPPL YDPIRCNG  CGA+LNPY QVD+ +KLWTCPFC+ RNHFPPHYAENI
Sbjct:    1 MDISSIQAQEERDGVRLSWNVWPSSRLEATRIVIPIGALYTPLKPIGN-PPPLIYDPIRCNG--CGALLNPYCQVDYRTKLWTCPFCLGRNHFPPHYAENI 98          
BLAST of mRNA_H-paniculata_contig252.6858.1 vs. uniprot
Match: A0A6U3YQE8_9STRA (Protein transport protein SEC23 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YQE8_9STRA)

HSP 1 Score: 159 bits (401), Expect = 3.560e-43
Identity = 71/100 (71.00%), Postives = 80/100 (80.00%), Query Frame = 0
Query:    4 WDVRSAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPP--LSYDPIRCNGNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENI 101
            WDV + EERD  R SWNVWPSSRLEATRIVVPVGCLYTP+K     PP   L YDPIRCN   CGA+LNPY Q+DF +KLW+CPFC++RNHFPP YAEN+
Sbjct:   16 WDVLAMEERDGARLSWNVWPSSRLEATRIVVPVGCLYTPLKRLGSMPPTGALPYDPIRCNN--CGAVLNPYCQIDFRTKLWSCPFCLKRNHFPPLYAENM 113          
BLAST of mRNA_H-paniculata_contig252.6858.1 vs. uniprot
Match: T1HWT2_RHOPR (Protein transport protein SEC23 n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1HWT2_RHOPR)

HSP 1 Score: 144 bits (362), Expect = 2.340e-42
Identity = 62/93 (66.67%), Postives = 74/93 (79.57%), Query Frame = 0
Query:    6 VRSAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLSYDPIRCNGNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYA 98
            ++ +EERD +RF+WNVWPSSRLEATR+VVPVGCLY P+K R+D PP L YDP++C  N C AILNP  QVD+ +KLW C FC QRN FPP YA
Sbjct:    8 IQQSEERDGIRFTWNVWPSSRLEATRLVVPVGCLYQPLKERYDLPPIL-YDPVQCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYA 99          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig252.6858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCK6_ECTSI3.540e-6193.07Protein transport protein SEC23 n=2 Tax=Ectocarpus... [more]
A0A7S2Y1K9_9STRA1.150e-5579.21Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A7S4D7Q8_HETAK9.920e-5474.26Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A835YT42_9STRA1.430e-4876.53Protein transport protein SEC23 n=1 Tax=Tribonema ... [more]
A0A7S3HKU0_9STRA1.270e-4767.33Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A8J2WHU7_9STRA5.270e-4573.27Protein transport protein SEC23 n=1 Tax=Pelagomona... [more]
W7U0J5_9STRA8.740e-4570.65Protein transport protein SEC23 n=1 Tax=Nannochlor... [more]
F0XWM5_AURAN1.030e-4472.28Protein transport protein SEC23 n=1 Tax=Aureococcu... [more]
A0A6U3YQE8_9STRA3.560e-4371.00Protein transport protein SEC23 n=1 Tax=Dictyocha ... [more]
T1HWT2_RHOPR2.340e-4266.67Protein transport protein SEC23 n=1 Tax=Rhodnius p... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006895Zinc finger, Sec23/Sec24-typePFAMPF04810zf-Sec23_Sec24coord: 57..97
e-value: 2.0E-17
score: 62.9
NoneNo IPR availableGENE3D2.60.40.1670coord: 10..53
e-value: 9.6E-41
score: 141.8
NoneNo IPR availableGENE3D2.30.30.380coord: 54..99
e-value: 9.6E-41
score: 141.8
NoneNo IPR availablePANTHERPTHR11141:SF10PROTEIN TRANSPORT PROTEIN SEC23Bcoord: 7..98
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 6..65
IPR037364Protein transport protein Sec23PANTHERPTHR11141PROTEIN TRANSPORT PROTEIN SEC23coord: 7..98
IPR036174Zinc finger, Sec23/Sec24-type superfamilySUPERFAMILY82919Zn-finger domain of Sec23/24coord: 49..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig252contigH-paniculata_contig252:41286..41594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig252.6858.1mRNA_H-paniculata_contig252.6858.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig252 41286..41594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig252.6858.1 ID=prot_H-paniculata_contig252.6858.1|Name=mRNA_H-paniculata_contig252.6858.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
MDHWDVRSAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAP
PPLSYDPIRCNGNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAEN
IR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006895Znf_Sec23_Sec24
IPR037364Sec23
IPR036174Znf_Sec23_Sec24_sf