prot_H-paniculata_contig2518.6852.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2518.6852.1
Unique Nameprot_H-paniculata_contig2518.6852.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length878
Homology
BLAST of mRNA_H-paniculata_contig2518.6852.1 vs. uniprot
Match: A0A6H5JKM2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKM2_9PHAE)

HSP 1 Score: 407 bits (1047), Expect = 5.640e-125
Identity = 343/921 (37.24%), Postives = 446/921 (48.43%), Query Frame = 0
Query:  111 IYISNRAQMDAKVVTAVVNYASKQAVASTGKLLLAATGAASPAFQLMGIN-ATDTQESLNVSLQLMSLGVIPDSLDTSPKMLPSLKDFDNDDKRLSAAY-------------------------------------------------------RRQASFTLL------SKPLPAKVLGALPSTLNKAVDLAYEVEQEV--------------------------------------------KYERAGSRANKLLRPFGLLLPEARDASRLLGG-PDPSREKMLEGSTAENLSTAINPISSSKSYLDNIETPDEAKERRTSPRAESIDERRERRAPMPPTPDPFGVWKWFSQTAPHREEGDLSPARVVPNLDEATPNSKLAAALVGLPHLLAKELSTCLEDGEKDLAMQERSFRAADAVLCCTEPVIIALEEGTAREYVLLDQVKSMARTVQQQYVLAEINEAVEAAEAHIVRLELLATNVMELAASVRTYMGAASERTAQM---VNMTSR------FQEAKTVVDTAVATGEHNG----------EGIVRAVGLLQEFDANRACRISAAGVVDDWLITVRQESPERALDDAGRVHEDALLAAARLWEVSVSAFRVRGKHASAVDRIANEIDRVAKPSVAAASEEAVIVETEEVVPSNTGRLGEPEIAGVKNNVLGGIEGASTLISDTGGEVMLKLESITADDASRED----VVEVER----------------EQAREIWVDEVVVDNSSTASGASFVDPVIPAE-IQELEEPMAQVEVVRDAFVVSE------SVARTLYERTASRQLEGEHAEIITSSPTKDISASSSSARGSIALVIDENQSFVDTEAEVEDDISDPTRVGIKVLDVIALLVEKVLFVGLPTALSSGALVWERLDNVVNGAKGRKGWRLLKRFKKD 878
            IY++NR ++D+K V AVV+YASKQA A TGKLLLAA+GA SPA  LMG+N  T+TQ +LN S+QL+S+G++PDS+  SPK+L SLKDFD+DDKRL AAY                                                       RRQ+SF L       SKPLPA++LG+LPST+NKA DLAYEVEQEV                                            KYERAGSRANKLLRP GL LPEA+    LLG  P  S  K+LE S A   S A NP  S       +ET     E    P  + +  RRE    MPP PD  GV+  F +       G+LS                LA  L   P +  K+LS C++    ++ MQER  RAA+AVLC TEPVI  LEE   RE VLL+++K++ R VQQ YVLAE+                    V+ELA  +  Y+G  + R  +    +N+ SR       +  +T+    + T    G          E   R +GLLQ FD         A  V   L  + +ES ERA D+AGR HE AL+AA RLW+ +  A    GK AS +D +  E+ R+                 +++  S T  +G P   G +        GA     +   E +  ++   A D    D    V  VER                +   ++        + +  +G S       AE + +L++ +   EVV DA VV E      S A +L E ++ R  +G  +     S  +   AS  S   SI LV+D++ SFVD EAE+EDD+SDP RVG+K LDV ALL+EKVLFVGLPT +S G+LVW+RLDN VNGAKGRKGW+LL R KKD
Sbjct:    7 IYVANRPRIDSKAVKAVVDYASKQAAAGTGKLLLAASGAGSPALLLMGVNNTTETQAALNNSVQLLSMGIVPDSISLSPKLLASLKDFDDDDKRLDAAYQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGQTGNRAARRRQSSFRLQLQRRRRSKPLPARLLGSLPSTINKASDLAYEVEQEVRPLRSLSRRFSARTKAKLESGLKPPTHSLLHEQHYVRLFAAVQVKYERAGSRANKLLRPIGLSLPEAKRNGLLLGRTPSGSAGKILEASDA---SLAANPSPSRILGSRRLETTPAVVE----PPIQEVSARRE---VMPPLPDLVGVFDRFGRKGVDARGGELSSTE-----------RALAEMLASQPDVFTKQLSKCIDSIGDEVQMQERGLRAANAVLCSTEPVIAGLEEALEREAVLLEELKNVTRNVQQTYVLAEMXXXXXXXXXXXXXXXXXXXXVVELAVYLEAYIGGETARHGEYSSRLNLKSRSSVTNLIERLETIKSRMLQTRGLGGIQDSSRAAQVELSSRTIGLLQYFDGEVVAGHEEAKAVGGRLDVIWRESAERARDEAGRAHEYALVAACRLWKAA--AVEGSGKRASTLDSVRLELTRI-----------------QDIQDSTTSTMGVPRKVGREE--FARATGAEVRAREGDRERLRAVKDEAARDTEGGDQQASVSPVERGVTAAPAPSFPGRSQADHGVKLTPPMTTTPDITPVAGESTTVQTPEAEMVVDLDQSVKSAEVV-DAVVVDEASVRGGSAATSLDENSSRRSGDGGLSRKGFLSAERTTIASEES---SIELVVDKSSSFVDVEAEMEDDVSDPARVGLKFLDVFALLIEKVLFVGLPTLVSGGSLVWQRLDNAVNGAKGRKGWKLLDRLKKD 881          
BLAST of mRNA_H-paniculata_contig2518.6852.1 vs. uniprot
Match: A0A835Z0K6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K6_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.460e-18
Identity = 104/311 (33.44%), Postives = 143/311 (45.98%), Query Frame = 0
Query:    4 QLSEIDARVLNELLSDPAFIESLR-EQGL-EGTDAIGDTTAGTEGESGEDGTEVTSKSAEPLSGSLAVAGKRSERISEYESATMQVVEELQESVRGLMAKLTATVESAGIYISNRAQMDAKVVTAVVNYASKQAVASTGKLLLAATGAASPAFQLMGI-NATDTQE------------SLNVSLQLMSLGVIP----DSLDTSPKMLPSLKDFDNDDKRLSAAY-----RRQASFTLLSKPLP-----------AKVLGALPSTLNKAVDLAYEVEQEVKYERAGSRANKLLRPFGLLLPEARDASRLLGG 279
            +LS+IDA VL EL+ D  F+ S+  ++GL +  D + D  A   G  G                + A AG       EY SAT Q+ E L       +AK+ A VE+A I I N+ Q+D   V  V N   ++A     + L AA  AA P   L    N T                 L +   L+ LGV P    ++   +P++L + K F+++D RL AAY     +R AS    S   P            K+LGALP+ +  A DLAY VEQEV+YE+ G R  ++LR  G+ L  A  A   LGG
Sbjct:  209 RLSDIDAAVLRELMQDQEFMSSVAMKEGLKQQLDGLQDEYAAAAGGKG----------------AGAAAG-------EYSSATFQIFEGLSLGWGTFVAKVGAAVETAAIAIQNKVQVDINTVLGVTNAIVQRATYDARRTLAAAATAARPDMLLAPARNVTRXXXXXXXXXXXXPALDLGLGFTLLQLGVNPFEEVNAGGAAPELLDAFKGFEDEDARLRAAYARGKRKRNASLPEASSAAPRFSVSRQTAEACKLLGALPAAVGAADDLAYAVEQEVRYEKPGRRTTQVLRRVGIPLSGA--AQSALGG 494          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2518.6852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKM2_9PHAE5.640e-12537.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0K6_9STRA1.460e-1833.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 461..481

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2518contigH-paniculata_contig2518:9714..14925 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2518.6852.1mRNA_H-paniculata_contig2518.6852.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2518 9714..14925 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2518.6852.1 ID=prot_H-paniculata_contig2518.6852.1|Name=mRNA_H-paniculata_contig2518.6852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=878bp
MVGQLSEIDARVLNELLSDPAFIESLREQGLEGTDAIGDTTAGTEGESGE
DGTEVTSKSAEPLSGSLAVAGKRSERISEYESATMQVVEELQESVRGLMA
KLTATVESAGIYISNRAQMDAKVVTAVVNYASKQAVASTGKLLLAATGAA
SPAFQLMGINATDTQESLNVSLQLMSLGVIPDSLDTSPKMLPSLKDFDND
DKRLSAAYRRQASFTLLSKPLPAKVLGALPSTLNKAVDLAYEVEQEVKYE
RAGSRANKLLRPFGLLLPEARDASRLLGGPDPSREKMLEGSTAENLSTAI
NPISSSKSYLDNIETPDEAKERRTSPRAESIDERRERRAPMPPTPDPFGV
WKWFSQTAPHREEGDLSPARVVPNLDEATPNSKLAAALVGLPHLLAKELS
TCLEDGEKDLAMQERSFRAADAVLCCTEPVIIALEEGTAREYVLLDQVKS
MARTVQQQYVLAEINEAVEAAEAHIVRLELLATNVMELAASVRTYMGAAS
ERTAQMVNMTSRFQEAKTVVDTAVATGEHNGEGIVRAVGLLQEFDANRAC
RISAAGVVDDWLITVRQESPERALDDAGRVHEDALLAAARLWEVSVSAFR
VRGKHASAVDRIANEIDRVAKPSVAAASEEAVIVETEEVVPSNTGRLGEP
EIAGVKNNVLGGIEGASTLISDTGGEVMLKLESITADDASREDVVEVERE
QAREIWVDEVVVDNSSTASGASFVDPVIPAEIQELEEPMAQVEVVRDAFV
VSESVARTLYERTASRQLEGEHAEIITSSPTKDISASSSSARGSIALVID
ENQSFVDTEAEVEDDISDPTRVGIKVLDVIALLVEKVLFVGLPTALSSGA
LVWERLDNVVNGAKGRKGWRLLKRFKKD
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