prot_H-paniculata_contig25153.6847.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25153.6847.1
Unique Nameprot_H-paniculata_contig25153.6847.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length119
Homology
BLAST of mRNA_H-paniculata_contig25153.6847.1 vs. uniprot
Match: A0A1I9LVX1_9PHAE (50S ribosomal protein L12, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVX1_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 2.390e-49
Identity = 92/119 (77.31%), Postives = 103/119 (86.55%), Query Frame = 0
Query:    1 LIDELKNLTLLEVADLVKAIEETFNVDSSTGGGVMMMSGAGAVKSEDSVVAEKKTEFDLSLDEVPKDKNISILKVVRSATELGLKEAEEVVENTPKVLKEGLSKAAAEETKKTLEEVGA 119
            LIDELK LTLLE A+LVKAIEETF+VD+S  GG +MM  AGA  SED+V  E+KTEFD+SLDEVPKDK ISILK++RS TELGLKEA+EVVENTPKV+KEGLSK AAEETKK LEE GA
Sbjct:    8 LIDELKTLTLLEAAELVKAIEETFDVDASPAGGGVMMMNAGATISEDNVSDEEKTEFDVSLDEVPKDKKISILKIIRSITELGLKEAKEVVENTPKVIKEGLSKTAAEETKKLLEEAGA 126          
BLAST of mRNA_H-paniculata_contig25153.6847.1 vs. uniprot
Match: A0A8F0F840_9PHAE (Ribosomal protein L12 n=1 Tax=Postelsia palmaeformis TaxID=105414 RepID=A0A8F0F840_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 4.680e-49
Identity = 92/119 (77.31%), Postives = 106/119 (89.08%), Query Frame = 0
Query:    1 LIDELKNLTLLEVADLVKAIEETFNVDSSTGGGVMMMSGAGAVKSEDSVVAEKKTEFDLSLDEVPKDKNISILKVVRSATELGLKEAEEVVENTPKVLKEGLSKAAAEETKKTLEEVGA 119
            LID LK LTLLE A+LVKAIEETF+VD+STGGGVMMMS  G+V S++   AE+KTEFD+SLDEVPKDK I ILK+VRS TELGLKEA+E+VENTPKV+KEGL+KAAAEETKKTLE+ GA
Sbjct:    8 LIDGLKTLTLLEAAELVKAIEETFDVDASTGGGVMMMSQGGSV-SDNGETAEEKTEFDISLDEVPKDKKIPILKIVRSLTELGLKEAKELVENTPKVIKEGLTKAAAEETKKTLEDAGA 125          
BLAST of mRNA_H-paniculata_contig25153.6847.1 vs. uniprot
Match: A0A8E5XRI1_9PHAE (50S ribosomal protein L12, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRI1_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 7.360e-46
Identity = 89/119 (74.79%), Postives = 99/119 (83.19%), Query Frame = 0
Query:    1 LIDELKNLTLLEVADLVKAIEETFNVDSSTGGGVMMMSGAGAVKSEDSVVAEKKTEFDLSLDEVPKDKNISILKVVRSATELGLKEAEEVVENTPKVLKEGLSKAAAEETKKTLEEVGA 119
            LI+ELKNLTLLE ADLV AIEETFNVD+S GGGVMMM G     SED+   E+KTEFD+SLDEVPKDK ISILKVVR+ T+LGLKEA+EVVENTPK++KEGL K AAEE K  LEE GA
Sbjct:    8 LIEELKNLTLLEAADLVTAIEETFNVDASAGGGVMMM-GTTTSPSEDAKPTEEKTEFDISLDEVPKDKKISILKVVRTVTQLGLKEAKEVVENTPKIVKEGLLKEAAEEAKTLLEEAGA 125          
BLAST of mRNA_H-paniculata_contig25153.6847.1 vs. uniprot
Match: D1GJP6_FUCVE (50S ribosomal protein L12, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJP6_FUCVE)

HSP 1 Score: 149 bits (377), Expect = 2.600e-44
Identity = 87/121 (71.90%), Postives = 103/121 (85.12%), Query Frame = 0
Query:    1 LIDELKNLTLLEVADLVKAIEETFNVDSSTGG--GVMMMSGAGAVKSEDSVVAEKKTEFDLSLDEVPKDKNISILKVVRSATELGLKEAEEVVENTPKVLKEGLSKAAAEETKKTLEEVGA 119
            LI+ELK LTLLE A+LVK+IEETF+VD+ TGG  GVMMM+  GA+ +ED+   E+KTEFD+SL+EVPKDK I+ILKVVRS TELGLKEA+EVVENTPKV+KEGL K AAEE KK LE+ GA
Sbjct:    8 LIEELKTLTLLEAAELVKSIEETFDVDAPTGGASGVMMMN-PGAISTEDNNTVEEKTEFDVSLEEVPKDKKIAILKVVRSVTELGLKEAKEVVENTPKVIKEGLPKVAAEEAKKLLEDAGA 127          
BLAST of mRNA_H-paniculata_contig25153.6847.1 vs. uniprot
Match: A0A8F0JYI3_9PHAE (Ribosomal protein L12 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYI3_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 1.550e-43
Identity = 89/121 (73.55%), Postives = 96/121 (79.34%), Query Frame = 0
Query:    1 LIDELKNLTLLEVADLVKAIEETFNVDSSTGGGVMMMSGAGAVKSED--SVVAEKKTEFDLSLDEVPKDKNISILKVVRSATELGLKEAEEVVENTPKVLKEGLSKAAAEETKKTLEEVGA 119
            LIDELK LTLLE ADLVKAIEETFNVD+STG GVM              S V E+KTEFDLSLDEVPKDK ISILKVVR+ TELGLKEA+EVVENTP++LKEGLSKAAAEE K  LE+ GA
Sbjct:    8 LIDELKTLTLLEAADLVKAIEETFNVDASTGSGVMXXXXXXXXXXXXXXSEVVEEKTEFDLSLDEVPKDKKISILKVVRTVTELGLKEAKEVVENTPRILKEGLSKAAAEEAKTLLEDAGA 128          
BLAST of mRNA_H-paniculata_contig25153.6847.1 vs. uniprot
Match: A0A5B9RE57_9PHAE (50S ribosomal protein L12, chloroplastic n=28 Tax=Laminariales TaxID=2886 RepID=A0A5B9RE57_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 1.270e-39
Identity = 83/119 (69.75%), Postives = 93/119 (78.15%), Query Frame = 0
Query:    1 LIDELKNLTLLEVADLVKAIEETFNVDSSTGGGVMMMSGAGAVKSEDSVVAEKKTEFDLSLDEVPKDKNISILKVVRSATELGLKEAEEVVENTPKVLKEGLSKAAAEETKKTLEEVGA 119
            LIDELK LTLLE A+LVKAIEETF+VD+S G                   AE+KTEFD+SLDEVPKDK I ILKVVRS TELGLKEA+E+VENTPKV+KEGL+KAAAEETKKTLE+ GA
Sbjct:    8 LIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXXGEA-AEEKTEFDVSLDEVPKDKKIPILKVVRSVTELGLKEAKELVENTPKVIKEGLTKAAAEETKKTLEDAGA 125          
BLAST of mRNA_H-paniculata_contig25153.6847.1 vs. uniprot
Match: A0A6B7EZL5_9PHAE (50S ribosomal protein L12 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EZL5_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 7.540e-39
Identity = 80/119 (67.23%), Postives = 92/119 (77.31%), Query Frame = 0
Query:    1 LIDELKNLTLLEVADLVKAIEETFNVDSSTGGGVMMMSGAGAVKSEDSVVAEKKTEFDLSLDEVPKDKNISILKVVRSATELGLKEAEEVVENTPKVLKEGLSKAAAEETKKTLEEVGA 119
            LIDELK LTLLE A+LVKAIEETF+VD+S G                    E+KTEF++SLDEVPKDK ISILKVVR+ TELGLKEA+EVVENTPKV++EGL+KAAAEETKK LE+ GA
Sbjct:    8 LIDELKTLTLLEAAELVKAIEETFDVDASAGXXXXXXXXXXXXXXXXXXXGEEKTEFNVSLDEVPKDKKISILKVVRAVTELGLKEAKEVVENTPKVIQEGLTKAAAEETKKLLEDAGA 126          
BLAST of mRNA_H-paniculata_contig25153.6847.1 vs. uniprot
Match: A0A2I4Q2K7_9PHAE (50S ribosomal protein L12, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2K7_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 2.160e-38
Identity = 79/119 (66.39%), Postives = 92/119 (77.31%), Query Frame = 0
Query:    1 LIDELKNLTLLEVADLVKAIEETFNVDSSTGGGVMMMSGAGAVKSEDSVVAEKKTEFDLSLDEVPKDKNISILKVVRSATELGLKEAEEVVENTPKVLKEGLSKAAAEETKKTLEEVGA 119
            LI+ELK LTLLE A+LV  IEE FNVD+STGG             E++ VAE+KTEF LSLDEVPK+K I+ILKVVR+ TELGLKEA+EVVENTP++LKE L+K AAEE KK LEE GA
Sbjct:    8 LIEELKTLTLLEAAELVTQIEEVFNVDASTGGXXXXXXXXXXXXGEETSVAEEKTEFGLSLDEVPKEKKIAILKVVRTVTELGLKEAKEVVENTPRLLKESLTKDAAEEAKKLLEEAGA 126          
BLAST of mRNA_H-paniculata_contig25153.6847.1 vs. uniprot
Match: A0A8F0FB01_9PHAE (Ribosomal protein L12 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB01_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 4.210e-38
Identity = 81/119 (68.07%), Postives = 92/119 (77.31%), Query Frame = 0
Query:    1 LIDELKNLTLLEVADLVKAIEETFNVDSSTGGGVMMMSGAGAVKSEDSVVAEKKTEFDLSLDEVPKDKNISILKVVRSATELGLKEAEEVVENTPKVLKEGLSKAAAEETKKTLEEVGA 119
            LI+ELK LTLLE A+LVKAIEETF+VD+S GG                  AE+KTEFD+SLDEVPKDK ISILKVVRS TELGLKEA+EVVENTPKV+K GL+K+AAEE KK LE+ GA
Sbjct:    8 LIEELKTLTLLEAAELVKAIEETFDVDASAGGXXXXXXXXXXXXXXX-XXAEEKTEFDVSLDEVPKDKKISILKVVRSVTELGLKEAKEVVENTPKVIKAGLTKSAAEEAKKLLEDAGA 125          
BLAST of mRNA_H-paniculata_contig25153.6847.1 vs. uniprot
Match: A0A6G6D787_ECTSI (50S ribosomal protein L12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A6G6D787_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 4.210e-38
Identity = 80/119 (67.23%), Postives = 94/119 (78.99%), Query Frame = 0
Query:    1 LIDELKNLTLLEVADLVKAIEETFNVDSSTGGGVMMMSGAGAVKSEDSVVAEKKTEFDLSLDEVPKDKNISILKVVRSATELGLKEAEEVVENTPKVLKEGLSKAAAEETKKTLEEVGA 119
            LIDELK LTLLE A+LVKAIEETF+VD+S+G               ++   E+KTEFD+SLDEVPKDK ISILK+VRS TELGLKEA+EVVENTPKV++EGL+K+AAEE KK LEE GA
Sbjct:    8 LIDELKTLTLLEAAELVKAIEETFDVDASSGXXXXXXXXXXXXXXXNAS-GEEKTEFDVSLDEVPKDKKISILKIVRSLTELGLKEAKEVVENTPKVIQEGLTKSAAEEAKKVLEEAGA 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25153.6847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1I9LVX1_9PHAE2.390e-4977.3150S ribosomal protein L12, chloroplastic n=1 Tax=P... [more]
A0A8F0F840_9PHAE4.680e-4977.31Ribosomal protein L12 n=1 Tax=Postelsia palmaeform... [more]
A0A8E5XRI1_9PHAE7.360e-4674.7950S ribosomal protein L12, chloroplastic n=1 Tax=I... [more]
D1GJP6_FUCVE2.600e-4471.9050S ribosomal protein L12, chloroplastic n=3 Tax=F... [more]
A0A8F0JYI3_9PHAE1.550e-4373.55Ribosomal protein L12 n=1 Tax=Protohalopteris sp. ... [more]
A0A5B9RE57_9PHAE1.270e-3969.7550S ribosomal protein L12, chloroplastic n=28 Tax=... [more]
A0A6B7EZL5_9PHAE7.540e-3967.2350S ribosomal protein L12 n=1 Tax=Cladosiphon okam... [more]
A0A2I4Q2K7_9PHAE2.160e-3866.3950S ribosomal protein L12, chloroplastic n=1 Tax=D... [more]
A0A8F0FB01_9PHAE4.210e-3868.07Ribosomal protein L12 n=1 Tax=Desmarestia aculeata... [more]
A0A6G6D787_ECTSI4.210e-3867.2350S ribosomal protein L12 n=1 Tax=Ectocarpus silic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013823Ribosomal protein L7/L12, C-terminalPFAMPF00542Ribosomal_L12coord: 57..119
e-value: 9.3E-20
score: 70.8
IPR000206Ribosomal protein L7/L12TIGRFAMTIGR00855TIGR00855coord: 1..119
e-value: 1.5E-30
score: 104.1
IPR000206Ribosomal protein L7/L12HAMAPMF_00368Ribosomal_L7_L12coord: 1..119
score: 16.513
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 53..119
e-value: 2.5E-20
score: 74.2
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 53..119
IPR008932Ribosomal protein L7/L12, oligomerisationPFAMPF16320Ribosomal_L12_Ncoord: 1..42
e-value: 1.9E-13
score: 49.9
IPR036235Ribosomal protein L7/L12, oligomerisation domain superfamilyGENE3D1.20.5.710coord: 1..52
e-value: 4.6E-10
score: 41.1
IPR036235Ribosomal protein L7/L12, oligomerisation domain superfamilySUPERFAMILY48300Ribosomal protein L7/12, oligomerisation (N-terminal) domaincoord: 1..58
NoneNo IPR availablePANTHERPTHR45987FAMILY NOT NAMEDcoord: 1..119
NoneNo IPR availablePRODOMPD001326coord: 58..103
e-value: 3.0E-10
score: 151.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25153contigH-paniculata_contig25153:1999..2355 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25153.6847.1mRNA_H-paniculata_contig25153.6847.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25153 1999..2355 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25153.6847.1 ID=prot_H-paniculata_contig25153.6847.1|Name=mRNA_H-paniculata_contig25153.6847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
LIDELKNLTLLEVADLVKAIEETFNVDSSTGGGVMMMSGAGAVKSEDSVV
AEKKTEFDLSLDEVPKDKNISILKVVRSATELGLKEAEEVVENTPKVLKE
GLSKAAAEETKKTLEEVGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013823Ribosomal_L7/L12_C
IPR000206Ribosomal_L7/12
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR008932Ribosomal_L7/L12_oligo
IPR036235Ribosomal_L7/L12_oligo_N_sf