mRNA_H-paniculata_contig2515.6846.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2515.6846.1 vs. uniprot
Match: D8LFG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG5_ECTSI) HSP 1 Score: 380 bits (976), Expect = 3.830e-120 Identity = 252/417 (60.43%), Postives = 288/417 (69.06%), Query Frame = 2
Query: 116 GEDEFLTEEDVVAEYEVGEGNSDGVMAMGQEMDDGDEDEEGQEAVEDMAKATFEGHADSVYCVAANPKNPSQLVSGGGDDKGFLWAVGNDGAITGSRELSGHTDSVASVAFSTDGSLVATGCYGGVLNVWETATATLKSTLEGPEDIEWLTWHTVGNILLAGSQDGTVWMWDAVPGTCMQVFAGHEKKVSCGMFTSSGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXGFHQGAVTCLARHPDPAQSPLIMSGGDDGTARVLHVQTKRVLGTMTHCESGAGSVEAVGFCATHPWVATAGTDGGLKIWDSVSGSCRQTCSHPEGVTRLEWHPAAPXXXXXXXXXXXXXXXXXXXXXXXVFTGHTDMILDLRLVDLQSQELLQNPSAAAGGEGDKPMLVVTA------SDDQTAKVFRWP 1348
G+DEF+ D+ AE+E+G+G DMA ATF GH+D+VYCVA +PKNPSQ V+GGGDDKGFLW + +DGA+ GS EL GH D+V++V FS DGSLVATGC+GG+L VWE AT LK LEG EDIE L WHT+ MQVFAGHE KVS XXXXXXXXXXXXXXXXXXXXXXXXXXGFH G+VTCLA HP+ AQ+ L+MSGG+DGTARV+HVQ KRV+GTM HC++GAGSVEAVGFCATHPWVAT GTDGG+K+WD+VSG+CR TC HP VTRLEWHPAA XXXXXXXXXXXXXXXXXXXXX +FTGHTDMILD+RLVD +SQ AAG SDD +KVFRWP
Sbjct: 41 GDDEFMEAGDIAAEFEIGDGEEXXXXXXXXXXXXXXX--XXXXXXXDMAVATFTGHSDAVYCVAVHPKNPSQFVTGGGDDKGFLWTIQDDGAVGGSCELGGHPDTVSAVGFSLDGSLVATGCFGGLLKVWEAATGGLKHVLEGQEDIECLAWHTLXXXXXXXXXXXXXXXXXXXXXXXMQVFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHVGSVTCLASHPNHAQAALVMSGGEDGTARVMHVQNKRVVGTMVHCDAGAGSVEAVGFCATHPWVATGGTDGGMKVWDTVSGTCRHTCLHPAAVTRLEWHPAAXXXXXXXXXXXXXXXXXXXXXXTSLFTGHTDMILDMRLVDPRSQ--------AAGAXXXXXXXXXXXXXXXXXSDDNASKVFRWP 447
BLAST of mRNA_H-paniculata_contig2515.6846.1 vs. uniprot
Match: A0A835YY67_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY67_9STRA) HSP 1 Score: 302 bits (773), Expect = 1.270e-89 Identity = 210/491 (42.77%), Postives = 254/491 (51.73%), Query Frame = 2
Query: 50 PEGTKEAQAGQADMEQDGDAQAGEDE---FLTEEDVVAEYEVGEGNSDGVMAMGQEMDDGDEDEEGQEAVEDMAKATFEGHADSVYCVAANPKNPSQLVSGGGDDKGFLWAVGNDGAITGSRELSGHTDSVASVAFSTDGSLVATGCYGGVLNVWETATATLKSTLEGPEDIEWLTWHTVGNILLAGSQDGTVWMWDAVPGTCMQVFAGHEKKVSCGMFTSSGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXGFHQGAVTCLARHPDPAQSPLIMSGGDDGTARVLHVQTKRVLGTMTHCESGAG---------------------------SVEAVGFCATHPWVATAGTDGGLKIWDSVSGSCRQTCSHPEGV------------------TRLEWHPAAPXXXXXXXXXXXXXXXXXXXXXXXVFTGHTDMILDLRLVDLQSQELLQNPSAAAGGEGDKPMLVVTASDDQTAKVFRWPQEAETVPVAS 1378
P+G + A A+ + + + AG+D F+ DV+ EY+VG+ + ATF GH D VYC+A NP P+Q ++GGGDD+GFLW + DG ++ EL GHTD+V SVAFS DG+L ATG Y G + +W++AT LK LEGP+D+EW TWH CM+VFAGHE +V+ G FTSSGK XXXXXXXXXXXXXXXXXXXXXXXXXXGFH+G VTCLA HPDP Q+ L++SG +DGTAR++H QTKRVL T H + A SVEAVGFCA PW AT G DG LKIWD SG CR TC HP G+ TRL WHP P +TGH DM LDL DL E G G + ASDD TAKVF +A P A+
Sbjct: 9 PDGAADEPAADAEAQDEVSSMAGDDNDEAFIDPSDVIEEYDVGDEPXXXXXXXXXXXXXXXXXXXXXXXXXXQSSATFSGHGDVVYCIAVNPAKPTQFLTGGGDDRGFLWTLSADGDVSQCHELGGHTDTVGSVAFSCDGALAATGGYDGRVQIWDSATGALKFCLEGPDDVEWATWHPKXXXXXXXXXXXXXXXXXXXXXECMRVFAGHEGRVNAGAFTSSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHEGPVTCLAVHPDPEQAHLVLSGSEDGTARLVHAQTKRVLATFVHSANVAAAXXXXXXXXXXXXXXXXXDAMEAEASFSVEAVGFCAVRPWCATGGADGNLKIWDLQSGLCRHTCRHPAGIXXXXXXXXXXXXXXXXXXTRLRWHPRLPTLYTACADGALRAWDALSGACARTYTGHRDMALDL---DLYVSE---------GSTG----WIAAASDDGTAKVFNIEVDAPPAPAAA 483
BLAST of mRNA_H-paniculata_contig2515.6846.1 vs. uniprot
Match: A0A7S2SSY9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSY9_9STRA) HSP 1 Score: 260 bits (665), Expect = 2.030e-74 Identity = 187/425 (44.00%), Postives = 229/425 (53.88%), Query Frame = 2
Query: 239 QEAVEDMAKATFEGHADSVYCVAANPKNPSQL--VSGGGDDKGFLWAVG-----------------------------NDGAITGSRELSGHTDSVASVAFSTDGSLVATGCYGGVLNVWETATATLKSTLEGPEDIEWLTWHTVGNILLAGSQDGTVWMWDAVPGTCMQVFAGHEKKVSCGMFTSSGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXGFHQGAVTCLARHP------------DPAQSPLIMSGGDDGTARVLHVQTKRVLGTMTHC-----------ESGAG-SVEAVGFCATHPWVATAGTDGGLKIWDSVSGSCRQTCSHPEGVT--RLEWHPAAPXXXXXXXXXXXXXXXXXXXXXXXVFTGHTDMILDLRLVDLQSQELLQNPSAAAGGEGDKPMLVVTASDDQTAKVFR 1342
QE +D++ T +GH+DSVY VA + +L V+GGGDD LW++ T L GH DSV SV FS DGSL AT GV+ VW + L TLEGP D+EWL WH GN+LLAGS DGTVWMW A G CMQVFAGHE V+ G+FT G+ VXXXXXXXXXXXXXXXXXXXXXXXXXXGFH+GAVTCLA HP + + LIMSG +DG A++LH+ +KR++ + H E+G G SVE V C PW AT G DG K+WD SG R + PEGV +L WHP+ TGH +M+LDL+ P G+G++ LV+++SDDQTAKVFR
Sbjct: 71 QEVFDDLSLVTLDGHSDSVYSVAGCRMDGGELRVVTGGGDDVAMLWSISPSLGDAPPXXXXXXXXXXXXXXXAPTQAPRQLEATKLATLEGHADSVVSVGFSHDGSLFATASMDGVIKVWSSDDGKLVRTLEGPGDVEWLQWHGKGNVLLAGSSDGTVWMWLASSGACMQVFAGHEGAVTSGIFTPDGRTVXXXXXXXXXXXXXXXXXXXXXXXXXXGFHEGAVTCLAAHPKWDSGTSAADGSSDSSNHLIMSGSEDGYAKLLHLGSKRIVASFAHSPGISQEGTVDEEAGEGFSVEDVDLCGVQPWAATGGVDGFCKVWDISSGRLRHSLQIPEGVAVVKLRWHPSQALIVTASADGVVRLWDARQGLMAKELTGHRNMLLDLQ------------PLWGRDGDGEEGDLVLSSSDDQTAKVFR 483
BLAST of mRNA_H-paniculata_contig2515.6846.1 vs. uniprot
Match: A0A7R9VPV1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VPV1_9CHLO) HSP 1 Score: 220 bits (560), Expect = 2.620e-60 Identity = 147/389 (37.79%), Postives = 197/389 (50.64%), Query Frame = 2
Query: 215 DGDEDEEGQEAVEDMAKATFEGHADSVYCVAANPKNPSQLVSGGGDDKGFLWAVGND------GAITGSRELSGHTDSVASVAFSTDGSLVATGCYGGVLNVWETATATLKSTLEGPE-DIEWLTWHTVGNILLAGSQDGTVWMWDAVPGTCMQVFAGHEKKVSCGMFTSSGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXG--FHQGAVTCLARHPDPAQSPLIMSGGDDGTARVLHVQTKRVLGTMTHCESGAGSVEAVGFCATHPWVATAGTDGGLKIWDSVSGSCRQTCSHPEGVTRLEWHPAAPXXXXXXXXXXXXXXXXXXXXXXXVFTGHTDMILDLRLVDLQSQELLQNPSAAAGGEGDKPMLVVTASDDQTAKVFRWPQE 1354
DGDE E Q+ ED FEGH D+V VA +P +P + SGG DD FLW VG D GA++ + EL GHTDSVASVAF+T G+L+AT G++ VW TA +L +L+GP ++W+ WH G+++LAGS+D T+WMW A G MQVF+GH V+CGMFT GKAV G FH +T L D ++SG +DG+ R+ +V T RV+G + + A SVEAVGF P A+AG DG L +WD + S R H +GVTR+ WHP P + GH + DL A +G +++T +DD TA+VF Q+
Sbjct: 53 DGDELE--QDGEEDSIHQ-FEGHQDAVLAVAWSPAHPDLVASGGQDDAAFLWRVGQDAFENPEGALS-TAELPGHTDSVASVAFNTAGTLLATAGMEGIVKVWNTADGSLMRSLDGPGGSVDWVRWHPKGDVVLAGSEDFTMWMWLAQSGQFMQVFSGHSGPVTCGMFTPDGKAVVSCGGEDDCSLRVWNPKTGACSAQIQGHGFHAEGLTSLDILAD---GMTVISGAEDGSVRLSNVGTGRVVGALEGHDE-ASSVEAVGFSRLLPLAASAGIDGKLLVWDLSTLSQRGCGDHLDGVTRMGWHPTQPLVFTGCLDGAARCWDLRTGGAVRTWRGHNAGVQDL----------------AVSPDGS---MIITGADDHTARVFSLAQD 414
BLAST of mRNA_H-paniculata_contig2515.6846.1 vs. uniprot
Match: A0A1Y1X5D0_9FUNG (WD40 repeat-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1X5D0_9FUNG) HSP 1 Score: 218 bits (556), Expect = 7.540e-60 Identity = 127/368 (34.51%), Postives = 178/368 (48.37%), Query Frame = 2
Query: 248 VEDMAKATFEGHADSVYCVAANPKNPSQLVSGGGDDKGFLWAVGNDGAITGSRELSGHTDSVASVAFSTDGSLVATGCYGGVLNVWETATATLKSTLEGPEDIEWLTWHTVGNILLAGSQDGTVWMWDAVPGTCMQVFAGHEKKVSCGMFTSSGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXG--FHQGAVTCLARHPDPAQSPLIMSGGDDGTARVLHVQTKRVLGTMTHCESGAGSVEAVGFCATHPWVATAGTDGGLKIWDSVSGSCRQTCSHPEGVTRLEWHPAAPXXXXXXXXXXXXXXXXXXXXXXXVFTGHTDMILDLRLVDLQSQELLQNPSAAAGGEGDKPMLVVTASDDQTAKVFRW 1345
V+D + F H + VYCVA +P +++GGGDDK ++W + + E +GH+DSV S FS DG ATG G + +W +L +TLEGP+++ W+ WH VG +++AG+ DGTVWMW V G CM VFAGH V+CG FT GK + FHQ ++CLA + D LI++G D TAR++++Q+ +LG++ + E +VEAVGFC T P VAT DG + IWD + R C H + V +L+WH + F GH D +L L +G + VT SDD A VF W
Sbjct: 67 VDDSVQGFFT-HKEPVYCVAFHPTEHHVVMTGGGDDKAYVWRIDTGEQV---YEFAGHSDSVTSAKFSADGKYAATGGMDGRVKIWNIGDGSLLNTLEGPDEVVWIDWHPVGPVIIAGASDGTVWMWHGVTGACMNVFAGHNGPVTCGQFTHDGKKIVTASEDCSLIVWDPKTATAIVKVTGDDARFHQDPISCLAINKDDT---LIITGSADSTARLINLQSGNILGSLENHEE---AVEAVGFCDTLPIVATGSIDGKISIWDVTTMRLRGHCQHDDTVIQLKWHKNSHMFTTCSADRTVRVWDARTGNCEHKFQGHEDSVLAFDL----------------SYDGH---VTVTGSDDGVALVFNW 405
BLAST of mRNA_H-paniculata_contig2515.6846.1 vs. uniprot
Match: A0A7S2MQ02_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQ02_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.640e-57 Identity = 192/414 (46.38%), Postives = 239/414 (57.73%), Query Frame = 2
Query: 227 DEEGQEAVEDMAKATFEG-HADSVYCVA-------------ANPKNPS----QLVSGGGDDKGFLWAVGNDGAITGS-RELSGHTDSVASVAFSTDGSLVATGCYGGVLNVWETATATLKSTLEGPEDIEWLTWHTVGNILLAGSQDGTVWMWDAVPGTCMQVFAGHEKKVSCGMFTSSGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXGFHQGAVTCLARHPDPAQSP---LIMSGGDDGTARVLHVQTKRVLGTMTHC-----ESGAG-------SVEAVGFCAT--HPWVATAGTDGGLKIWDSVSGSCRQTCSHP-------EGVTRLEWHPAAPXXXXXXXXXXXXXXXXXXXXXXXVFTGHTDMILDLRLVDLQSQELLQNPSAAAGGEGDKPMLVVTASDDQTAKVF 1339
D+E Q V DM+ AT G H DS+Y VA P+ P ++ +GGGDD+G LW V T L GHTDSV +VAFS D +L+ATG G++ +W+ A+ L+ +LEGP DIEWL WH GN++LAG V AGHE V+ G FT G+ XXXXXXXXXXXXXXXXXXXXXXXXXXG H+ VTC+A HP+ +S L ++G +DGTAR++ V K+V+G H E A SVEAV FC T PW+ATAG DG +KIWD +G+ R+TC P + VT+L W P PXXXXXXXXXXXXXXXXXXXXX TGH+DM+LD+ A P L+ TASDDQT+++F
Sbjct: 64 DDEPQTPVPDMSIATLAGMHEDSIYTVAHSRFIPAENTVAPGTPQPPPTGIFRVATGGGDDRGGLWEVALPSRETRLVARLEGHTDSVIAVAFSFDDALLATGGMDGIVRIWDAASGALQQSLEGPGDIEWLDWHVKGNVVLAGXXXXXXXXXXXXXXXXXXVLAGHEGGVTAGNFTPDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCHEAGVTCIAFHPNWIESESDRLALTGSEDGTARLMQVSAKKVVGCFAHSVPLTNEGSAQQQAVEILSVEAVAFCRTKSQPWIATAGVDGTVKIWDMTNGALRETCVDPGKVGGEADPVTKLLWFPNIPXXXXXXXXXXXXXXXXXXXXXVEALTGHSDMVLDM-----------------AAAWDVSPFLLFTASDDQTSRLF 460
BLAST of mRNA_H-paniculata_contig2515.6846.1 vs. uniprot
Match: A0A1Y2ALC8_9FUNG (WD40 repeat-like protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2ALC8_9FUNG) HSP 1 Score: 211 bits (537), Expect = 2.410e-57 Identity = 142/373 (38.07%), Postives = 200/373 (53.62%), Query Frame = 2
Query: 125 EFLTEEDVVAEYEVGE----GNSDGVMAMGQEMDDGDEDEEGQEAVEDMAKATFEGHADSVYCVAANPKNPSQLVSGGGDDKGFLWAVGNDGAITGSRELSGHTDSVASVAFSTDGSLVATGCYGGVLNVWETATATLKSTLEGPEDIEWLTWHTVGNILLAGSQDGTVWMWDAVPGTCMQVFAGHEKKVSCGMFTSSGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXG--FHQGAVTCLARHPDPAQSPLIMSGGDDGTARVLHVQTKRVLGTMTHCESGAGSVEAVGFCATHPWVATAGTDGGLKIWDSVSGSCRQTCSHPEGVTRLEWHPAAPXXXXXXXXXXXXXXXXXXXXXXXVFTGHTDMILDLRL 1225
EF EE+ + + E+ E +GV EMD GD+++E A+E+ ++ F GH S++ +A NP N +SGG DD+GF+W + N G + EL GHTDSV +V F+ +G ATG G++ +W++ T L L+GP +I WL WH GNI+LAGS DG +WMW G M FAGH+ VSCG FT GK + +H+ +TCL+ + L++SG DG + +QT R++ ++ + SVE V FC P +A+A DG ++IWD + S R +H V RL+WH +PXXXXXXXXXXXXXXX V+ GH ILD +
Sbjct: 7 EFQEEEEYINQDEIAEVIDPETLEGVQDEDVEMDTGDDEDE---AIENDSEVRFTGHTGSIFAIALNPVNQCYAISGGEDDRGFIWNIVN-GEVH--AELGGHTDSVVAVGFNINGQYAATGGMDGIIKIWDSDTGKLVMNLDGPTEINWLQWHPKGNIILAGSNDGMLWMWLIPSGVLMNTFAGHQSSVSCGCFTPDGKNIISASDDGTLIFWNPKTAAPIYSIKPNDARWHRNPITCLSVS---MERNLVVSGSADGLVCISQLQTGRIVKSL---DGHMDSVEDVAFCDCLPLMASASMDGTIRIWDLNNYSVRHILNHDGAVIRLKWHKNSPXXXXXXXXXXXXXXXARTGNCLKVWKGHRKSILDFAM 367
BLAST of mRNA_H-paniculata_contig2515.6846.1 vs. uniprot
Match: A0A8J4BX95_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4BX95_9CHLO) HSP 1 Score: 209 bits (532), Expect = 1.880e-56 Identity = 164/418 (39.23%), Postives = 225/418 (53.83%), Query Frame = 2
Query: 119 EDEFLTEEDVVAEYEVGEGNSDGVMAMGQEMDDGDEDEEG--QEAVEDMAKATFEGHADSVYCVAANPKNPSQLVSGGGDDKGFLWAVGNDG-----AITGSRELSGHTDSVASVAFSTDGSLVATGCYGGVLNVWETATATLKSTLEGPED-IEWLTWHTVGNILLAGSQDGTVWMWDAVPGTCMQVFAGHEKKVSCGMFTSSGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXG--FHQGAVTCLARHPDPAQSPLIMSGGDDGTARVLHVQTKRVLGTMTHCESGAGSVEAVGFCATHPWVATAGTDGGLKIWDSVSGSCRQTCSHPEGVTRLEWHPAAPXXXXXXXXXXXXXXXXXXXXXXXVFTGHTDMILDLRLVDLQSQELLQNPSAAAGGEGDKPMLVVTASDDQTAKVFR 1342
ED+ + E DVV + E D + DGD +++G +ED + F+GH ++V VA NP P + +GG DD +LW VG D G+ EL GH D+VA++AFS+ G+++AT G+ VW A L +LEG ++W+TWH G+++++G+ D ++MW+A G MQVF+GH VS G FTS GK++ XXXXXXXXXXXXXXXXXXXXXXXG FH+ +TCL H D + + +GGDDG + +V T RV G +T E SVEAVG A P A+A DG L IWD + S R C HP VTR+ WHP P + GH D + D+ L +P + +++T SDD TA+VF+
Sbjct: 16 EDDDIIEGDVVDDLE----GEDPEYGSEDDGGDGDGEDDGPIHTVLEDDSFHCFDGHHEAVVAVAWNPALPDVVATGGCDDTAYLWRVGQDAFEESAGSLGTYELPGHQDTVAALAFSSSGAMLATAGMDGMCKVWRVADGQLMHSLEGSGGALQWITWHPRGDVVVSGTDDCMIYMWNATTGAVMQVFSGHCGAVSAGCFTSDGKSLVSVXXXXXXXXXXXXXXXXXXXXXXXGHPFHESGITCLGLHRDGGGAAI--TGGDDGCVCISNVATGRVGGRLTGHED---SVEAVGLSAQLPLAASASLDGKLLIWDCGTLSQRGCCEHPTSVTRMVWHPTEPFVFTACLDGASRCWDLRTASCVRTYGGHEDAVQDICL----------SPDGS---------MLLTGSDDGTARVFK 405
BLAST of mRNA_H-paniculata_contig2515.6846.1 vs. uniprot
Match: A0A2I1ERP9_9GLOM (WD40 repeat-like protein n=7 Tax=Rhizophagus TaxID=1129544 RepID=A0A2I1ERP9_9GLOM) HSP 1 Score: 207 bits (527), Expect = 2.780e-56 Identity = 148/362 (40.88%), Postives = 186/362 (51.38%), Query Frame = 2
Query: 272 FEGHADSVYCVAANPKNPSQLVSGGGDDKGFLWAVGNDGAITGSR--ELSGHTDSVASVAFSTDGSLVATGCYGGVLNVWETATATLKSTLEGPEDIEWLTWHTVGNILLAGSQDGTVWMWDAVPGTCMQVFAGHEKKVSCGMFTSSGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXG--FHQGAVTCLARHPDPAQSPLIMSGGDDGTARVLHVQTKRVLGTMTHCESGAGSVEAVGFCATHPWVATAGTDGGLKIWDSVSGSCRQTCSHPEGVTRLEWHPAAPXXXXXXXXXXXXXXXXXXXXXXXVFTGHTDMILDLRLVDLQSQELLQNPSAAAGGEGDKPMLVVTASDDQTAKVFRW 1345
F H DSVY + NP N + +VSGGGDDK FLW TG + EL GHTDSV S FS DG VA+G G + VW+ +LEGP++I WL WH GNILLAG+ D T+WMW G CM VF+GH V+ G FT XXXXXXXXXXXXXXXXXXXX FH+ +TCLA + + S L++SG D +AR++++ +LG+ E SVE GF P AT DG L IWD + RQTC+H + + +L+WH +P F GH D IL A +G K +VTA DD VF++
Sbjct: 31 FFDHKDSVYTIDINPINENLIVSGGGDDKSFLW-----NGDTGEKLFELLGHTDSVTSALFSKDGQYVASGGMDGKVKVWKVENREFILSLEGPDEIVWLDWHPKGNILLAGANDSTIWMWQVPSGNCMNVFSGHSSSVTTGQFTPDXXXXXXXXXXXXXXXXXXXXXXXXYKISGEDARFHKEGITCLAVNKE---STLVLSGSSDASARLVNLTNGNILGSF---EDHTESVETAGFSNILPLAATGSLDGKLNIWDVTTMRLRQTCNHDDAIIQLQWHHDSPLLTTCSADRTVRVWDGRTGNCEKTFYGHQDTILGF----------------AISKDGKK---IVTAGDDHVCLVFKY 362
BLAST of mRNA_H-paniculata_contig2515.6846.1 vs. uniprot
Match: D8TPE5_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TPE5_VOLCA) HSP 1 Score: 208 bits (530), Expect = 3.580e-56 Identity = 158/416 (37.98%), Postives = 215/416 (51.68%), Query Frame = 2
Query: 119 EDEFLTEEDVVAEYEVGEGNSDGVMAMGQEMDDGDEDEEGQEAVEDMAKATFEGHADSVYCVAANPKNPSQLVSGGGDDKGFLWAVGNDG-----AITGSRELSGHTDSVASVAFSTDGSLVATGCYGGVLNVWETATATLKSTLEGPED-IEWLTWHTVGNILLAGSQDGTVWMWDAVPGTCMQVFAGHEKKVSCGMFTSSGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXG--FHQGAVTCLARHPDPAQSPLIMSGGDDGTARVLHVQTKRVLGTMTHCESGAGSVEAVGFCATHPWVATAGTDGGLKIWDSVSGSCRQTCSHPEGVTRLEWHPAAPXXXXXXXXXXXXXXXXXXXXXXXVFTGHTDMILDLRLVDLQSQELLQNPSAAAGGEGDKPMLVVTASDDQTAKVFR 1342
ED + E DVV + E GE G G + DD D+ + +ED + F+GH D+V VA NP P + +GG DD +LW VG D G+ EL+GHTD+VA++AFS+ G+++AT G+ VW A L +LEG ++WL+WH G +++AG+ D +MW+A G MQVF+GH VS G FT GK+V XXXXXXXXXXXXXXX G FH +TCL H D + + +GGDDG + ++ T RV G +T E SVEAVG A P A+A DG L +WD + S R C HP VTR+ WHP P + GH D + D+ L +P + +++T +DD TA+VF+
Sbjct: 16 EDVDIIEGDVVDDLE-GEDPDYGSEGEG-DGDDTQSDDRIRTVLEDDSFHCFDGHQDAVVSVAWNPALPDVVATGGCDDTAYLWRVGQDAFEESAGSLGTYELAGHTDTVAALAFSSSGTMLATAGMDGICKVWRVADGRLVHSLEGSGGALQWLSWHPRGEVVVAGTDDCMAYMWNAATGAVMQVFSGHCGVVSAGCFTPDGKSVVSVGXXXXXXXXXXXXXXXECTLTIQGHPFHDSGITCLGLHRDGGGAAI--TGGDDGCVCISNIATGRVGGRLTGHED---SVEAVGLSAHLPLAASASLDGKLLVWDCGTLSQRGCCEHPTSVTRMVWHPTEPLVFTACLDGASRCWDLRTATCVRTYGGHEDAVQDICL----------SPDGS---------MLLTGADDGTARVFK 405 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2515.6846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2515.6846.1 >prot_H-paniculata_contig2515.6846.1 ID=prot_H-paniculata_contig2515.6846.1|Name=mRNA_H-paniculata_contig2515.6846.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=455bp MSGSKETENPPEGTKEAQAGQADMEQDGDAQAGEDEFLTEEDVVAEYEVGback to top mRNA from alignment at H-paniculata_contig2515:7798..20503+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2515.6846.1 ID=mRNA_H-paniculata_contig2515.6846.1|Name=mRNA_H-paniculata_contig2515.6846.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12706bp|location=Sequence derived from alignment at H-paniculata_contig2515:7798..20503+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2515:7798..20503+ >mRNA_H-paniculata_contig2515.6846.1 ID=mRNA_H-paniculata_contig2515.6846.1|Name=mRNA_H-paniculata_contig2515.6846.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2730bp|location=Sequence derived from alignment at H-paniculata_contig2515:7798..20503+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |