mRNA_H-paniculata_contig2513.6837.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2513.6837.1
Unique NamemRNA_H-paniculata_contig2513.6837.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2513.6837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2513contigH-paniculata_contig2513:11411..20633 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1360
Cds size1098
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2513.6837.1prot_H-paniculata_contig2513.6837.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2513 11448..20408 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929738.7549253-UTR-H-paniculata_contig2513:11410..114471622929738.7549253-UTR-H-paniculata_contig2513:11410..11447Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2513 11411..11447 +
1691480990.10563-UTR-H-paniculata_contig2513:11410..114471691480990.10563-UTR-H-paniculata_contig2513:11410..11447Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2513 11411..11447 +
1622929738.8162575-UTR-H-paniculata_contig2513:20408..206331622929738.8162575-UTR-H-paniculata_contig2513:20408..20633Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2513 20409..20633 +
1691480990.1578414-UTR-H-paniculata_contig2513:20408..206331691480990.1578414-UTR-H-paniculata_contig2513:20408..20633Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2513 20409..20633 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929738.7696228-CDS-H-paniculata_contig2513:11447..115191622929738.7696228-CDS-H-paniculata_contig2513:11447..11519Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2513 11448..11519 +
1691480990.114271-CDS-H-paniculata_contig2513:11447..115191691480990.114271-CDS-H-paniculata_contig2513:11447..11519Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2513 11448..11519 +
1622929738.7819374-CDS-H-paniculata_contig2513:14091..141841622929738.7819374-CDS-H-paniculata_contig2513:14091..14184Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2513 14092..14184 +
1691480990.1284208-CDS-H-paniculata_contig2513:14091..141841691480990.1284208-CDS-H-paniculata_contig2513:14091..14184Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2513 14092..14184 +
1622929738.7925394-CDS-H-paniculata_contig2513:18413..186291622929738.7925394-CDS-H-paniculata_contig2513:18413..18629Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2513 18414..18629 +
1691480990.1392531-CDS-H-paniculata_contig2513:18413..186291691480990.1392531-CDS-H-paniculata_contig2513:18413..18629Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2513 18414..18629 +
1622929738.806063-CDS-H-paniculata_contig2513:19691..204081622929738.806063-CDS-H-paniculata_contig2513:19691..20408Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2513 19692..20408 +
1691480990.1486478-CDS-H-paniculata_contig2513:19691..204081691480990.1486478-CDS-H-paniculata_contig2513:19691..20408Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2513 19692..20408 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2513.6837.1

>prot_H-paniculata_contig2513.6837.1 ID=prot_H-paniculata_contig2513.6837.1|Name=mRNA_H-paniculata_contig2513.6837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=366bp
MPHIGELSIGIEEIYETGPRVLAKVVEKVIARLEARLAQRGEDAATIASA
GDVDKRWRARYGLPLPKAAEAVEAAEKQAIAHMRKREEYERNARRVRAAA
ARAKRRDAPPPVTRMTAARSPSPPTAVILAETSFGLPPNNFPIPSNNNSD
LKKISTLSVKKNSKNGTSRLVLSRKRPRAGKTIDNSHRPLARQKQIHTTT
TTTTTTTTTNNNKNGDQREQHEIALPPPTGTNSNTKDVGLGAGVRDQQEM
TSLPPPPPPPPPTAATTEMSNNAEDIGRTADTPVELATAVEGQGEAVADS
CADSFSVDHLCSAPKYDISMTANYEGRASRGRRNKLEWKLEVEGGVIECR
REVYVLSKCLCLLTS*
back to top

mRNA from alignment at H-paniculata_contig2513:11411..20633+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2513.6837.1 ID=mRNA_H-paniculata_contig2513.6837.1|Name=mRNA_H-paniculata_contig2513.6837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9223bp|location=Sequence derived from alignment at H-paniculata_contig2513:11411..20633+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAACAGCACACCAGGCGTAGGCGTGGGTCACCGGAGAATGCCTCATATTG GAGAGCTTAGCATTGGTATTGAAGAAATTTACGAAACCGGGCCAAGAGTT CTCGCAAAAGTGAGTATGAAAAGTCCAGTAGGCTTGTAGCTTGGCAGGCA GTGTTTTAAAAACATTCAAGTTGACAACCCACCACCAGTTGCCATCACCA AGAGGTTGAGAGACATAGAGGTCGAGAGCAAAAGAAAGAGAGATGAGGTT GAACTATGTGTAAAGAGCGAGAGATTTCGCTGGCAACGCGGGCATAACAT GAGATCAATGATGGTGTTCTCCTGGACGTACTTTGGATCTCATGCCCCCG AAAAGTTTCCGCTGAAACTTACCCCTAAATACCCACAGCACAGAACTTAA GCTCAACAGACAGTTCGGTGTAACGGTCGGAATTGTGATGGAAAGAAACC CCACGGCTCCCTCGATTGCGACAATAAACCCATCGAACACACGCCGACAG TCGTGCACTGCGCTCTCTACGTATTAGAACCCAAGAACATGTGTGCCTGC TTCTGCGGTATCTCAGCGTGCGTTCGCAGAAGAGCCATCTTTATAGTGCG AATCCCTTCATGAGCATGGTCATTACCACACGCCTCTGCCAATGCCTCCA ACCGACCAATAGCCTCTGACATCCCCAAGTACGGTGGAAGTGCACGAAAC GTCTTCGTCGCCTCCGGCACTCAACCTCTGTCGTTTACAAGTAACAATTT GGTCTGTATTGCATACTTTTTTTGTTTTACTTTGATATTATTAGAAACAG TCCCATTCTCAGACCCGCACGAAACGAGCGTAGCGCACAAATAGAACGCA AGGTGGGCTTAAACTGAGAATGTTTCACTTTAAGGCACTGTGGGACCAAA AAGTGCCTTAGAGGGGCATGCAGTGGTGCGGAGAAAACAAACAGGTGTCT TAAGGGTGCAAATGCCTTAAAAGGGCATATTTACTCTACTAGAGACTTGG GATCCGAGCTGCATGTGCACAAAACGAAAATTTCCGGATTCATGGCTGCT GCTTCCTCTCCTCTCTCACTTTGAACCTCCCACATTGACTTACCATTTGC TGTAAAACTAGCTTTGTTTCGGGGCGGTCACTACCCGCACGACGTACATA TCCAGCACAGGGTAGTATCAGCTTTGGTCAATCGTCATGGAGAGGAGCGG ATGGATTGGGAGGAAATCTACCCTCATTTTGTTCAATCGTTTGGCAGCAT GTGCTGAGTTGTGCATGTTCTTATAGATTCACACGAGGACTATACAATAC AACCACACATGACGGTGGACGTTCCATCCCGGCAGTCACATCTACAGGAA CCTGCCAACTAAATAAGCAATAGTTAATGTATTAGTCTCAACCCACGCGA GTAGGATGAGATGTGTCCCACGAACTGCAGCGAGCGAGCTATGCGGTCAA AGTTCCCCTCGTGAGAGTACCCAAGTGCAGAGCTACACCGAGGTATCGTA CGGCGCAAGGCAGCACGAGGTGCGTTGGAAGTTGAGATACGAACTGACCG GCAAGGGGTGAGGCACGAGCCTCGCCTCCCTAGGCCAGGAGTCATCACTC GTCATCCAGATGCTTCACATGGACAAGACGTCAGCTGAATGCGTCATGAC GACGCAACTTCAACTAGACACTTCATGTATACGAAAACCTCTCGCACGGA GGATGACACATGTTATGCGGATATGAGTATATTATGGCATCATGAAGTAT GTGGGTACCTGGCAATAACAAATCCTGGTACTAGCAGTTCAGGATCGTTT GTATCTTTTTTTGTGATCGGTAGGTTGTGGGTTAAATTACCTGTGTTCGC CATTTTTTCTCCCAGGTTTCCGGGAAAAATGGTATGATGTGGTAAAAAAT GAAAACGGAAGGGGAAAGATTACTCGTTCGAGTATACCGCCGTCAATTCC AACGCTAATGAACGAGTGGGACTGCTGACTGCTGCTCCGATCGCCCGATA GTACAATGCAAGAACAGAGGCATTGCATTCACAGCTTCGGACCGGGGATT CCAATGGATGGACTAACTCGTGACGAAAAAAAAAAATGTGTACTTCATAG TCCCAAGCAGTTTACATGTGTGCGTTGACGTTCACCCAACACACCGAAAT GGCCGATGGTAACTTCACAGCCAACTAATTGAATAAGATAAGATGGTGCA ACTGCTAGCATTATTATTACTCCCTTCAATTTATTGTATCTCACACAATA GCCCGTGTATCCGTTGAAGTGTATGTTGATCTGATCTGTGTCACGGTACC TGCGCCACATCCCTCATTTTGACGAATAACCACTGAGAGCGGGACAGTGA ACACATGGATTTTGATACAGTCGGAGAGAGCTACACGCAAAATATTTGTT TGACTGAAAGATCTCTCTCTCTTTTTCTTTCTCAACTCGTCTGGTTGGCT ACTTTATGCATTGATATCCAACACAGTTATGTGCCCAGTCCAATAGGCAA AAGCTTGTGACTGTAAAAGTTTTTCTTTCAAGTCTGCGGTGCGATGTCAA TGCAAGGCGGCAGAGGGTTACAGAGCGAGTGCGGAGAGTACGTCAAGTGA ACCGTTACCAGACCGCAACTCCGAAATCGCGTGTCGTCCTTTTTTCTGTT ATTTTCTCTATTTTATGGTTTCCTGTCACAGGTAGTCGAAAAGGTGATCG CCCGGTTGGAAGCGAGGCTTGCTCAGAGGGGTGAAGATGCAGCTACCATC GCTTCAGCCGGCGATGTAGACAAGGTGCGACTGTGGCAACGTGCTAGAGG CAATGTTGCCTAAACACCACGAGTATCGTAGATTGCTGCTGCTGCTGTCG TTTTTGTTCGATTTTTATTTCGCCGCCTTCAGAGCTACGAGCTGGGCCAT CCATAAAACCGATATTCCTTTCACGGCACATGTCTCAAGAACCACCGCGA GATATCACGAACTGCACACATGTATGAAATCAGCTAATCAGCATGTGCAT GCAGAGATAGCTTGCAACATGATTGGGTGACGTTAGACAAGAAACAAAGC TGACGTGTCAATAGTATACTGGTGTTAGAGTAGGGCGAAATCGCCGAAAA ATGCGGCGGAATTAGATTTGTTTTGTATATTAGGTTTCCTGCAGCACTGC AGCACTCTCCTTGCCTCGCCCGCGAATGCCGGACTTGTGCGGTACGATGG CGTCGAGCGTGCAGAGCGATCAGCGCTGGGAGAGGACTTCTCTCCCTAGA ATCTCTTATGACAAGCATAATGACGTGTGGCGGTTGGCTCTGAAGTACAC AAGACCAAAGATGCGTCCGGTATCTTGCAGCTCAAAAGCTTTCAAGGCAC AAGCGGAGGCTCAAGCAGCTCGGAATTCGTGGCGACTGAGTTGGGAGCTA GGGCACCGCGGGAAGCCCATTGAGGCAATAAGCCTTCCAGCTCAGAAGCC AGCTTCAGGCTCTGGGTCGGCGGCAGCAGCATCTACGAGCCTTCCACCAG GCGAGTTAAGCCACGGGCGATACTACACACTACTGTAAATACTGCAGTTG ACACTGCTATGAACACTGCTGTAAACACTGCTATAACCACTGTTTAAACG CTGCTTTAAACACAACCATGGCAAGCATACACGCACGATTGTGTTTGTTG ATTTTTTAACATGATCTGAACGTCCTTGTATCGTACATGTACGATTGCTG CTGCGTTCCCTGGCATCTGTAGGCTGCTGTACGAGTAGGTACCTTTTGCT TCCTGACCGCTCCTGTATGCCAACAGTACGATGATGCTGTTGCTCGTACA CGTCGGTTCTCCTCGTGAGATCGCACGATGGTTCGTTCCTCGTGTGTACG TGCGAGAACTGCTGTCTGCACGAGCATGGATGAGGAAGGCACGGTTCGCC TGCACTCCACGACTGTTTGCACCATTCCCCTAAATACTGTACTATGTACC TCTTACGTACGCACACAAATTCGTAATGACGCATGATCTCTTCCCGTTCG CTGCCGCTTCGACTCGCGACAGGTAAATATTTGAACTCCCTTGGCATTCT CAATGCCGCACAAGAGAGGGGGTTGACATCACTCGTGCGCAGTGGATCCA GTCGACGACCCTGACCGATCGGGAGAAGCGGTACATCACGAAATCTTGGC AGAGGCGTGAGGCGAGAGTCAACAAGCGTTTTCACGATCGGACCAGGCAC CTCTCTCACCACGTACAAGAAATGCAGGAGCATGTTGACAGCACAGAGTG CCTCATCTCCTGCGTTCGAGAAGAAGTGCAGGGCGACAGAAGCATGCTGT TGCACAGGGGTGCTGACGATCACGACGCTCACGTCTTCGTAGCGGCGGAT GCAGCACCTGGTGCGGCACACACCAGTGGAAAAGAGGCAACGGCTCCGTC GGTCTCTGGCCCTCAACGCGAGCGGCTGTACCGTCAAGCGGTGGCAACAC TCGATCTGTTGCTGCAGCAACCCGACCGAGATGCGCTGCAGCTCCTCCAT TTCAAGGACGCCTTGCAAGTAGTGCTGGTCAGCGAAAGGCAGTCGGAGCC GAATTTTTGAGCCCCTTAACGACGCCTCGCTCATTCGTCTCCGGTATGCG CTCGTGCAGATTGCGGAAGATGTGGTGGAAAGCACGAATTCGAAGTTCAA GCCGGTCACGATCCTGTCATGGGTTCATGAGTTTCGGAAACTAGGCGGGT ACTTCAAACGCGACGGCAGAGGTTTGCACGGGAGTGGATTCTGTCTAAGG AAGATCTTCAGCTCCAGTTGTTGGACTGGCTCAAGGTTGAGAAGCGTGTT TCAACGCGAAAGACGCAAGGGCATATCAACAATGTGCTGTTTGCCCGAGA AGGGGGAATGCTCCGGTTAGCAAAGTACGGTTTGACTCTGCCCATCTCCC AGACGACTGCATATTCGTGGATGATCAAGCTCAACTACAAGGTCGGCCGC GCCCAGCAATCTTACTACACGGATGGGCACGAAAGGGCTGTCGTCGTCGA GCACCGTGGTGGGTACACGAGGAGGAAGCGGAGACTGGCTCAGCAACTAC ACTGGATTCGGATCGAGTGGGACCAGCTGAGCCAGAACGAGAAGACCGCT TTCGAGCCCGGTTTAGAGGAGAACACGGACGAGTGCCCGGCAAAGACATT CATGTTCGAGCAAGGCGGGAAAAAGTGGTTGGAATTCCACGTCGACTTCT TGGGCGGGGCCTCGAACGAGAAACACGATGCTCTCCGTGAGCAATTGGGG CCCGAGGGTGGTTCCTGCAGTGTTCGCTTTGAAGACGCAGCGAGCGCACC ATGCGAGTATTCGCATGCTCCCGAGGTTTCTAGATGCAGTGAACAGTTAT ATCACATCGGTCAAGACGAGGGCGTCTACAGAGCGTACGCGCGCGAGGGG AAAGAGTGGGTAATCAGAGGTGTGTGCGGCTTGAGAAGGAAGACAGAGGG GGCGGTGGAGATGGTGTCTACCTTTCAGGATGAGTTGCGAGGGTTTGGCC TGCCTTACTCGGAGCCCGAACTCGCTGATGTCAACGAGCTCCGCTGCGAA AGGGGGCGGCCAGCTCTGAAAGCTACTGCAGGCTCGCGCTTTCTCAGGCA CAGCAAGAACAAGGAGGGACAGCGGGGGTATGATCAATTTGAGTAGCAAG TGATGGATGTGATGGACTGCATCGACGTGATCGCGCCAATGAAGCAGCTG GTGATTGAGGTAGACCATTCCGCAGGGCACGCCAAAATTTCGAGAGGACG GGCTTCATGTACGGAACATGTACGCGAAATACGGCGGCAAGCAGAAAATT TTACGTGATGTTATCATGACAGCGGAGTGTCTGGGCCCGCACGATGCGAA GATGCACTTGAATGGGGGACTTGAAGCACGCAGTTCATTCCAGGGATCAC CGCGAAGGCGGTGGATTTGAAGCCTCAGATCGGCGGAACGCAGCACATGT CTTTTGCGATGGATACCCCCCCCGCCGTTCTACGCTTGGTACGCACTGCC CGTTTCCCTAAACGAACGCGAAGACAAGGAGGCGTACGGTGGCAAGGCGA AGGGGATGAAGCAGGTGCTGTCGGAGCGCGGTTGGTATGTCGACGGGATG TCGAGGGCGACCATTGCACCGCCAAACATGAGGCCGGACACCGTTCTGGG TAACTTGCCCGACTTCAAGAATGAGATGTCGGCTTTGAAGCACCTGGTGC ACAGCCGCGGGCACATTCCTGCTGCTATCGCTGAAGTTCCACCCGGAGCC TACTGAGGTGGGAATCGAGTATTCGTGGGGAATGTCTAAGCTCAAGTTTC GGCGGGAGATCAACGACGACGTTCCGAAGAATCTGCACTCCAATATGGTC AAGTCGATGTGCCGCAAGACCATACTGACTCTTCCACGGGTGCGCCGCTT TGCCCGACGCACGCGTGATTTCTGCCGGTCGTACCTGGCGCTCGAGAAAG GCGGACCCATCGAGTCCAACGACCAGATCGAGAAGATGCGAAGAGTCTCC AAGGCGCATCGCAACATTATTGATATGGAACCTGGTCTCATGGACAAGCA GTTGTACCCGGACGAGAGATGAAAAGGGCCATATGTGATGTTGCTGTGCC TGTATCGTAGATAGAAGCATATGGCGAAGGAGATCTTTGATGTTCGAAAG TCTTGTGATAGAGATTATTTTCATACCGTGTACGGTGCAGTATGGTAGCA CTCGCAATGAGATGTTTGGTGTGATCAAGTCTTGCGTAAAAAGCTGTCCA TTAACAATATATCACTCTCTTTCCACCTGTAAAACACTAGGACTTCCCCC CAAGTTTGTGCAGTTTGTAAAGGATACGTGTTATAATCCAGCACCTTAAG AATACTAAGCATACCTCCATTTTTTTTTACGGTTATCGTCATGTTTCCTA CGAGGACGCCCCCCTCCCCCCCCCCCAACAAGCAAGCAACAAACATTCAC CACCACTTACGCTTGCCTCTCTTGTCCGAAATCAATCTCGTTTTTATTTT CAGCGGTGGCGAGCCAGGTATGGCCTCCCTCTGCCGAAGGCGGCGGAGGC GGTGGAGGCCGCGGAGAAGCAAGCGATAGCACACATGCGGAAGCGAGAGG AGTACGAAAGAAACGCAAGAAGGGTTCGCGCTGCCGCTGCTAGAGCTAAA CGGAGAGATGCGCCACCACCGGTAACCCGGATGACAGCTGCCCGTTCTCC TTCTCCTCCCACGGCTGTGGTCAGTTCCAGCTACCGCAGGTTACAGGGTA TATAGAGTACACGACAGGAGTGGTGAAGCGCCTACTTCTCAATATGGCGT GAGAGTCTCAAGACTTATACAGTAGGTGGACCTATATAAGGTATATGTGG TACACGGCCAAAAGCATGCCTTGTATAGCTCACATAACTTATTCAATTAT AAACCCAATACTAAATCCCCATATTCTGAAAAGAGGTGTCACCCGAAAAG GTATACTTCGTATGGGGACCGACACCTTCCATAAGGCCACCTACTGTACC TTGATATACAGCCTCATCCGAAAGATGAATTTTGTTGTATTAATTAAACA CTTCCTCTGGGCTATAAGTGAAGTCGGTTACGTTTATAGAGGCACGTAAC CATCTCCCATTTTTTCTTGAGTTGTAGTCCTACATCTTAAGGGGGTTGGT CCCCAAAATTTCATGGAAATTGGCGAAATCCGTCGTCATAGAAAAGACCC CGCGTCTACATACATTATCGATGTGTTCTCACGCGCGATATATTTTCCAA CGTGCGAGCTTTTGGGTTTACAAAAGGGCGACAGTAGCAGGAAGAATCGC GCTCTTGGACGGTGCGAAGATGGTAAAACTTGTTCTTATCTTTGAGTCGT GGTGGGTGACATGCCCACGTGAACTCTGCGGCAGGAATGCTGGCTAGTTA CCTTTTGAGATCATAGTGTTTCGCTGTCACGGGCGATAATACCCCAGCAG TAGTGCGGTAAACCAAAATAGATCTTTTACGGACACTAAGACTCTGATGA TGGTCAAACTTTAGCGTGATGGTTCCTATGACCGCTGGCCTCAATTCGCC TGTTTTGCATGGCGGACGGCATGGTGGTTCGGTTTAGCTGCTTTGTCTCC TTTAAGCTTCTTCCGCTGAATTATATATACCCCAGACATGCCTAGCCTAG TCATGTGCCGGAAATACTTGTAGAAATACAACAACTTACGTTAATCGTAA AAATTAATCGTTGAAAGCTCTTTTGCTCATCGTGTTTCGTTTCCTTACTT TTTCCTTTTTCCCTTTTTATTTGAACGTCAGATCCTCGCAGAAACTTCCT TCGGGCTCCCACCCAACAACTTCCCTATCCCATCCAACAACAACTCCGAC CTGAAAAAAATCTCGACGCTCTCTGTGAAAAAAAACAGCAAAAACGGCAC GAGTAGACTCGTCTTGAGCCGCAAACGACCCCGCGCTGGCAAAACAATCG ACAATTCCCATCGCCCACTCGCCCGACAGAAGCAAATCCACACCACCACC ACCACCACCACCACCACCACCACCACCAACAACAACAAAAATGGAGATCA GCGGGAGCAGCATGAAATAGCACTGCCACCACCAACGGGTACAAACAGTA ACACTAAAGATGTTGGTCTTGGTGCGGGGGTTCGGGATCAGCAGGAAATG ACATCATTACCACCACCACCACCACCACCACCACCAACAGCGGCAACAAC GGAAATGAGCAATAACGCCGAGGATATTGGTCGAACCGCGGATACACCAG TAGAACTTGCGACCGCTGTAGAAGGGCAGGGAGAGGCGGTGGCTGACAGT TGCGCTGACTCGTTCTCCGTAGATCATTTATGTAGCGCACCGAAATATGA CATTTCCATGACCGCAAACTACGAGGGTAGAGCCTCTAGGGGTAGAAGAA ACAAGCTGGAGTGGAAGTTGGAGGTGGAAGGCGGGGTGATCGAGTGCCGC AGGGAGGTGTACGTGTTGAGCAAGTGTTTGTGTTTATTGACAAGTTGATA CTTGACTGACTGTATTACGACATGCAAACTGACACGAAAAAAATGCAGAG CAAAAAAACGTTTCATTTCACTAGTGGTTTATTTCGAACGTGTAGAGAGT ATAGTAGTAGGCAGCGTGTTGTTGGATTTTTGTTTTTGTTTTTTGTTTTT ATAAAAAGCAGTCAATGCACATGTTTTCTTTACTTTCTTCTCTTCAGCCT TGTTTCATTGGTTTGTTTCTATT
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2513:11411..20633+

>mRNA_H-paniculata_contig2513.6837.1 ID=mRNA_H-paniculata_contig2513.6837.1|Name=mRNA_H-paniculata_contig2513.6837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2196bp|location=Sequence derived from alignment at H-paniculata_contig2513:11411..20633+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTCATATTGGAGAGCTTAGCATTGGTATTGAAGAAATTTACGAAAC
CGGGCCAAGAGTTCTCGCAAAAATGCCTCATATTGGAGAGCTTAGCATTG
GTATTGAAGAAATTTACGAAACCGGGCCAAGAGTTCTCGCAAAAGTAGTC
GAAAAGGTGATCGCCCGGTTGGAAGCGAGGCTTGCTCAGAGGGGTGAAGA
TGCAGCTACCATCGCTTCAGCCGGCGATGTAGACAAGGTAGTCGAAAAGG
TGATCGCCCGGTTGGAAGCGAGGCTTGCTCAGAGGGGTGAAGATGCAGCT
ACCATCGCTTCAGCCGGCGATGTAGACAAGCGGTGGCGAGCCAGGTATGG
CCTCCCTCTGCCGAAGGCGGCGGAGGCGGTGGAGGCCGCGGAGAAGCAAG
CGATAGCACACATGCGGAAGCGAGAGGAGTACGAAAGAAACGCAAGAAGG
GTTCGCGCTGCCGCTGCTAGAGCTAAACGGAGAGATGCGCCACCACCGGT
AACCCGGATGACAGCTGCCCGTTCTCCTTCTCCTCCCACGGCTGTGCGGT
GGCGAGCCAGGTATGGCCTCCCTCTGCCGAAGGCGGCGGAGGCGGTGGAG
GCCGCGGAGAAGCAAGCGATAGCACACATGCGGAAGCGAGAGGAGTACGA
AAGAAACGCAAGAAGGGTTCGCGCTGCCGCTGCTAGAGCTAAACGGAGAG
ATGCGCCACCACCGGTAACCCGGATGACAGCTGCCCGTTCTCCTTCTCCT
CCCACGGCTGTGATCCTCGCAGAAACTTCCTTCGGGCTCCCACCCAACAA
CTTCCCTATCCCATCCAACAACAACTCCGACCTGAAAAAAATCTCGACGC
TCTCTGTGAAAAAAAACAGCAAAAACGGCACGAGTAGACTCGTCTTGAGC
CGCAAACGACCCCGCGCTGGCAAAACAATCGACAATTCCCATCGCCCACT
CGCCCGACAGAAGCAAATCCACACCACCACCACCACCACCACCACCACCA
CCACCACCAACAACAACAAAAATGGAGATCAGCGGGAGCAGCATGAAATA
GCACTGCCACCACCAACGGGTACAAACAGTAACACTAAAGATGTTGGTCT
TGGTGCGGGGGTTCGGGATCAGCAGGAAATGACATCATTACCACCACCAC
CACCACCACCACCACCAACAGCGGCAACAACGGAAATGAGCAATAACGCC
GAGGATATTGGTCGAACCGCGGATACACCAGTAGAACTTGCGACCGCTGT
AGAAGGGCAGGGAGAGGCGGTGGCTGACAGTTGCGCTGACTCGTTCTCCG
TAGATCATTTATGTAGCGCACCGAAATATGACATTTCCATGACCGCAAAC
TACGAGGGTAGAGCCTCTAGGGGTAGAAGAAACAAGCTGGAGTGGAAGTT
GGAGGTGGAAGGCGGGGTGATCGAGTGCCGCAGGGAGGTGTACGTGTTGA
GCAAGTGTTTGTGTTTATTGACAAGTTGAATCCTCGCAGAAACTTCCTTC
GGGCTCCCACCCAACAACTTCCCTATCCCATCCAACAACAACTCCGACCT
GAAAAAAATCTCGACGCTCTCTGTGAAAAAAAACAGCAAAAACGGCACGA
GTAGACTCGTCTTGAGCCGCAAACGACCCCGCGCTGGCAAAACAATCGAC
AATTCCCATCGCCCACTCGCCCGACAGAAGCAAATCCACACCACCACCAC
CACCACCACCACCACCACCACCACCAACAACAACAAAAATGGAGATCAGC
GGGAGCAGCATGAAATAGCACTGCCACCACCAACGGGTACAAACAGTAAC
ACTAAAGATGTTGGTCTTGGTGCGGGGGTTCGGGATCAGCAGGAAATGAC
ATCATTACCACCACCACCACCACCACCACCACCAACAGCGGCAACAACGG
AAATGAGCAATAACGCCGAGGATATTGGTCGAACCGCGGATACACCAGTA
GAACTTGCGACCGCTGTAGAAGGGCAGGGAGAGGCGGTGGCTGACAGTTG
CGCTGACTCGTTCTCCGTAGATCATTTATGTAGCGCACCGAAATATGACA
TTTCCATGACCGCAAACTACGAGGGTAGAGCCTCTAGGGGTAGAAGAAAC
AAGCTGGAGTGGAAGTTGGAGGTGGAAGGCGGGGTGATCGAGTGCCGCAG
GGAGGTGTACGTGTTGAGCAAGTGTTTGTGTTTATTGACAAGTTGA
back to top