prot_H-paniculata_contig251.6827.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig251.6827.1
Unique Nameprot_H-paniculata_contig251.6827.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length298
Homology
BLAST of mRNA_H-paniculata_contig251.6827.1 vs. uniprot
Match: D7FJI6_ECTSI (MORN repeat variant family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJI6_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 1.350e-71
Identity = 126/228 (55.26%), Postives = 151/228 (66.23%), Query Frame = 0
Query:    4 PDVGSIKHALILEGLNALLPTLPRGIDVYLWIDYYCVEQDVADLKRAGARSIAAYMQQCDAVLTPYVESLYQGERDEGAGWLGTPRSEQQGLRPGSFVNPLSEAFSGSDAQASEWGAAGTPWPNHYRSLQDYCSRAWCRLEVLLCASLALRDGGFRHFGRRGQPERVNDRPHFLYGEHQRRRKLPPEALPSAGERGWAGSLDPLQGSLSIPEDMDAIVHAMATLRLPS 231
            PDV S KH  ++EGL+++L +LPR + V+LWIDY C++Q+  + KR GARS+AAYMQ  DAV TPY ESLY      G G   T            F NPL E                TPWPN YRSLQD+CSRAWCRLEVLLCA+L LRDGGFR+F  RG+  R  DRPHF+YGE+QRRR LPPEAL  + +  WA S+DPL+G LS PEDM+AIVH M  +RL S
Sbjct:  189 PDVDSAKHTFLVEGLHSILASLPREVAVFLWIDYSCIDQENPESKRKGARSVAAYMQLSDAVFTPYAESLYPSS---GGGGGET------------FANPLGEV-------------CNTPWPNSYRSLQDFCSRAWCRLEVLLCATLPLRDGGFRYFAARGEEGRAQDRPHFVYGEYQRRRNLPPEALARSVDEAWASSVDPLEGFLSNPEDMEAIVHGMGPVRLAS 388          
BLAST of mRNA_H-paniculata_contig251.6827.1 vs. uniprot
Match: D7FSV0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSV0_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 5.210e-21
Identity = 74/222 (33.33%), Postives = 97/222 (43.69%), Query Frame = 0
Query:    7 GSIKHALILEGLNALLPTLPRGIDVYLWIDYYCVEQDVADLKRAGARSIAAYMQQCDAVLTPYVESLYQGER-DEGAGWLGTPRSEQQGLRPGSFVNPLSEAFSGSDAQASEWGAAGTPWPNHYRSLQDYCSRAWCRLEVLLCASLALRDGGF-------RHFGRRGQPERVNDRPHFLYGEHQRRRKLPPEALPSAGERGWAGSLDPLQGSLSIPEDMDAI 220
            G  K+ LI E  + +   LP  + V LWIDY CV+QD     +A  R +  YM++CDA+LT     +Y G+  D G  +L           P  FV   +                   W   Y+SL  YC+R WCRLE+LL  +  L   GF       +     G    V DRPHFLYG HQR      + +P    R W     P QG+ +   D DAI
Sbjct:  557 GGEKYRLIAEAGDRIRAHLPPDVRVLLWIDYSCVDQDSTRRSKATMRGMREYMRRCDAILT-----VYPGDAADNGEEFL-----------PNRFVKSCA-------------------WAGSYKSLAHYCTRGWCRLEMLLGQTEPLPQDGFMFNFLVPKKKKASGAKASVGDRPHFLYGAHQRPHNGRIDVVPRQSSR-WFEEHHPEQGNFTHESDRDAI 742          
BLAST of mRNA_H-paniculata_contig251.6827.1 vs. uniprot
Match: A0A7S3PQI9_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQI9_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.380e-5
Identity = 27/69 (39.13%), Postives = 40/69 (57.97%), Query Frame = 0
Query:    5 DVGSIKHALILEGL-----NALLPTLPRGIDVYLWIDYYCVEQDVADLKRAGARSIAAYMQQCDAVLTP 68
            D  ++KH +I EG+     + L        D YLWIDY C+EQD A+ KR G RS+ +Y+ +C  ++ P
Sbjct:  115 DGKNMKHRIICEGIEKGLEDGLFFNGTETKDAYLWIDYSCIEQDDAEEKRKGIRSLVSYIAKCQVMVIP 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig251.6827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJI6_ECTSI1.350e-7155.26MORN repeat variant family protein n=2 Tax=Ectocar... [more]
D7FSV0_ECTSI5.210e-2133.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3PQI9_9STRA2.380e-539.13Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig251contigH-paniculata_contig251:26336..34745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig251.6827.1mRNA_H-paniculata_contig251.6827.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig251 26336..34746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig251.6827.1 ID=prot_H-paniculata_contig251.6827.1|Name=mRNA_H-paniculata_contig251.6827.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
GCKPDVGSIKHALILEGLNALLPTLPRGIDVYLWIDYYCVEQDVADLKRA
GARSIAAYMQQCDAVLTPYVESLYQGERDEGAGWLGTPRSEQQGLRPGSF
VNPLSEAFSGSDAQASEWGAAGTPWPNHYRSLQDYCSRAWCRLEVLLCAS
LALRDGGFRHFGRRGQPERVNDRPHFLYGEHQRRRKLPPEALPSAGERGW
AGSLDPLQGSLSIPEDMDAIVHAMATLRLPSAAPSPLSAASTPTSSGAAA
VATATATATALAATTPGASGMVSTNFDEERRDSTRYGLAGGDRVEKAS
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