prot_H-paniculata_contig251.6826.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig251.6826.1
Unique Nameprot_H-paniculata_contig251.6826.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length338
Homology
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BLAST of mRNA_H-paniculata_contig251.6826.1 vs. uniprot
Match: D7FJI6_ECTSI (MORN repeat variant family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJI6_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.830e-6
Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:  276 VAPLSLPEPELPMSVIPLARFAAARGIATCRAAKETGILVPSESLDRSCAFVVFVSHRWVED 337
            V P + P PE PM V+PL   +AAR     + A  +G LVP +SLDR+ AFVVFVSHRW+ +
Sbjct:  108 VGPFAFP-PEAPMFVLPLTGLSAARSFPKYQNAMRSGALVPYDSLDRNSAFVVFVSHRWINE 168
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig251.6826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJI6_ECTSI1.830e-651.61MORN repeat variant family protein n=2 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig251contigH-paniculata_contig251:19124..26254 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig251.6826.1mRNA_H-paniculata_contig251.6826.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig251 19116..26254 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig251.6826.1 ID=prot_H-paniculata_contig251.6826.1|Name=mRNA_H-paniculata_contig251.6826.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=338bp
MEDDEDAEFEHDFEDADEDELERQARRRRHQQDSQQQPGDDKYESSMQRA
TDVESIDVRSMSAEGGRGERKDTERRGHSRRIEREDHKQDLPEGATGEKN
PSFPAGAEALAEAPPTAHMSTVGAADGGDVRVLSSSTPTQQHEHMMEPLT
ADLLSAGRPGDSRGIAPVVAAAAKAVDAAMIVPSPPTPRTESASPAAATP
VSVRGSRRAAASRGSGTPSRGTPSRSTGRQGDAGKRLAAAATGGAAAAAA
TAAAAAAAAAAAAAAAAVVMPVAATVAPLSLPEPELPMSVIPLARFAAAR
GIATCRAAKETGILVPSESLDRSCAFVVFVSHRWVEDG
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