prot_H-paniculata_contig2508.6822.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2508.6822.1
Unique Nameprot_H-paniculata_contig2508.6822.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length309
Homology
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BLAST of mRNA_H-paniculata_contig2508.6822.1 vs. uniprot
Match: D7G880_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G880_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 3.110e-62
Identity = 261/316 (82.59%), Postives = 280/316 (88.61%), Query Frame = 0 
Query:    1 MFVKKDTRKIPEIL---DDEPEELHLGRRSSEFVPNGVKVVCSSRHTGKLQNLQRMSLYDNMLTNVKGIGALSATPLKHLNLGRNQLKSLPSELGKVGTLETLWVDDNAILDFPQSILALRRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERLEAAWGRVDVLTGKLDPDTIGSPLKAEVIVRGNPFADAATA--NKHGHIIEEVS---MDESR 308
            MFVKKDTRKIP+IL    DE EELHLGRRSSEFV NG+KVVCSSRH  +LQ LQ++SLYDNML++VKGIGALSATPLKHLNLGRNQLKSLP ELGKVGTLETLWVDDNAI DFP+S+L L+RL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +EAAWGR D +TGKLDP T+ SP K EV++RGNP AD   A  +  G+  E+     MDE+R
Sbjct:    1 MFVKKDTRKIPDILADEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDNAITDFPRSVLQLKRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVEAAWGRADPVTGKLDPATVDSPRKTEVVIRGNPIADPKQAGGSASGYTAEQDMTSLMDETR 316
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BLAST of mRNA_H-paniculata_contig2508.6822.1 vs. uniprot
Match: A0A835YNM3_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM3_9STRA)

HSP 1 Score: 130 bits (326), Expect = 6.690e-32
Identity = 68/124 (54.84%), Postives = 88/124 (70.97%), Query Frame = 0 
Query:    1 MFVKKDTRKIPEIL---DDEPEELHLGRRSSEFVPNGVKVVCSSRHTGKLQNLQRMSLYDNMLTNVKGIGALS--ATPLKHLNLGRNQLKSLPSELGKVGTLETLWVDDNAILDFPQSILALRR 119
            MF+KKD RKI EIL   +D  EEL LGRRS EF   G++V+CS  +   L  L+ +S+YDN+LT+++G+G L   AT L HLNLGRNQL++LP ELG V TLETLW+DDN + +FP  +  L R
Sbjct:    1 MFIKKDLRKINEILADREDSREELRLGRRSGEF-KGGLRVICSPHNIPALAQLRSLSVYDNLLTSIEGVGLLGNGATALLHLNLGRNQLRTLPQELGLVSTLETLWLDDNLLDEFPLPVTELTR 123
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BLAST of mRNA_H-paniculata_contig2508.6822.1 vs. uniprot
Match: A0A485L9Z5_9STRA (Aste57867_17909 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9Z5_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.230e-23
Identity = 56/107 (52.34%), Postives = 76/107 (71.03%), Query Frame = 0 
Query:    1 MFVKKDTRKIPEIL---DDEPEELHLGRRSSEFVPNGVKVVCSSRHTGKLQNLQRMSLYDNMLTNVKGIGALSATPLKHLNLGRNQLKSLPSELGKVGTLETLWVDD 104
            MFV KD RKIPEIL   +DE E++ LGRRS+EF  N + V+C+  +   L  LQ++SLYDN L +++ IG LS TPL  L+LG+NQL+ LP E+G + TL+ LWV +
Sbjct:    1 MFVVKDLRKIPEILQDPEDEREQMRLGRRSAEFSGN-LDVLCTPSNVTALTKLQKLSLYDNQLVSIERIGLLSKTPLCILDLGQNQLERLPDEIGSITTLKELWVSN 106
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BLAST of mRNA_H-paniculata_contig2508.6822.1 vs. uniprot
Match: W4FL85_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FL85_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.190e-21
Identity = 52/105 (49.52%), Postives = 74/105 (70.48%), Query Frame = 0 
Query:    1 MFVKKDTRKIPEILDD---EPEELHLGRRSSEFVPNGVKVVCSSRHTGKLQNLQRMSLYDNMLTNVKGIGALSATPLKHLNLGRNQLKSLPSELGKVGTLETLWV 102
            MFV KD RK+PEI+ D   + E+L LGRRS+EF  N ++++CS  +      LQ++SLYDN L+++ GIG LS+TPL  L+LG+NQL  LP E+G +  L+ LW+
Sbjct:    1 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLSSIDGIGLLSSTPLSILDLGQNQLDHLPHEIGSLRHLKELWL 104
[Close]
BLAST of mRNA_H-paniculata_contig2508.6822.1 vs. uniprot
Match: A0A6G0WAD8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAD8_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.190e-21
Identity = 51/118 (43.22%), Postives = 80/118 (67.80%), Query Frame = 0 
Query:    1 MFVKKDTRKIPEILDDEP---EELHLGRRSSEFVPNGVKVVCSSRHTGKLQNLQRMSLYDNMLTNVKGIGALSATPLKHLNLGRNQLKSLPSELGKVGTLETLWVDDNAILDFPQSIL 115
            MFV KD RKIP+I+ D+    E+L LGRR++EF    + ++C+  +      LQ++SLYDN L +++ IG L+ TPL  L+LG+NQL+SLP E+G +  L+ LWV +N ++   +++L
Sbjct:    1 MFVVKDLRKIPDIVRDDNDTREQLRLGRRAAEF-QGDLSILCTPSNVAAFSKLQKLSLYDNNLHSIERIGLLAETPLAILDLGQNQLESLPDEMGTLVHLKELWVTNNKLMTISEAVL 117
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BLAST of mRNA_H-paniculata_contig2508.6822.1 vs. uniprot
Match: W4FJA0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJA0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.170e-19
Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 0 
Query:    1 MFVKKDTRKIPEILDD---EPEELHLGRRSSEFVPNGVKVVCSSRHTGKLQNLQRMSLYDNMLTNVKGIGALSATPLKHLNLGRNQLKSLPSE-------------------------LGKVGTLETLWVDDNAILDFPQSILAL 117
            MFV KD RK+PEI+ D   + E+L LGRRS+EF  N ++++CS  +      LQ++SLYDN L+++ GIG LS+TPL  L+LG+NQL  LP E                         +G +  L+ LW+ +N +   P S+L L
Sbjct:    1 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLSSIDGIGLLSSTPLSILDLGQNQLDHLPHEVHSMQPRIGNSCNLTPILVLGRIVQIGSLRHLKELWLSNNWLTSVPDSVLTL 144
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BLAST of mRNA_H-paniculata_contig2508.6822.1 vs. uniprot
Match: A0A3R7BQF1_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BQF1_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.950e-19
Identity = 58/145 (40.00%), Postives = 82/145 (56.55%), Query Frame = 0 
Query:    1 MFVKKDTRKIPEILDD---EPEELHLGRRSSEFVPNGVKVVCSSRHTGKLQNLQRMSLYDNMLTNVKGIGALSATPLKHLNLGRNQLKSLPSE-------------------------LGKVGTLETLWVDDNAILDFPQSILAL 117
            MFV KD RK+PEI+ D   + E+L LGRRS+EF  N ++++CS  +      LQ++SLYDN LT++ GIG LS+TPL  L+LG+NQL  LP E                         +G +  L+ LW+ +N +   P S+L L
Sbjct:  358 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLTSIDGIGLLSSTPLSILDLGQNQLDHLPHEVHSMQPRIGNSCNLTPILVLGRIVQIGSLRHLKELWLSNNWLTSVPDSVLTL 501
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BLAST of mRNA_H-paniculata_contig2508.6822.1 vs. uniprot
Match: A0A024TAP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAP0_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 5.280e-19
Identity = 48/107 (44.86%), Postives = 73/107 (68.22%), Query Frame = 0 
Query:    1 MFVKKDTRKIPEILDDEP---EELHLGRRSSEFVPNGVKVVCSSRHTGKLQNLQRMSLYDNMLTNVKGIGALSATPLKHLNLGRNQLKSLPSELGKVGTLETLWVDD 104
            MFV KD RK+ EI+ D     E++ LGRRSSEF  N ++++C+  +      L ++SLYDN LT+++GIG L +TPL  L+LG+N+L+ LP E+G +  L+ LW+ +
Sbjct:    1 MFVVKDLRKVAEIVADPKDAREQMRLGRRSSEFQGN-LRILCTPANIPAFSRLTKLSLYDNQLTSIEGIGLLESTPLSILDLGQNRLEHLPDEIGCLRHLKELWLSN 106
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BLAST of mRNA_H-paniculata_contig2508.6822.1 vs. uniprot
Match: A0A5A8DB09_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DB09_CAFRO)

HSP 1 Score: 92.4 bits (228), Expect = 8.120e-18
Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = 0 
Query:    1 MFVKKDTRKIPEIL---DDEPEELHLGRRSSEFVPNGVKVVCSSRHTGKLQNLQRMSLYDNMLTNVKGIGAL-SATPLKHLNLGRNQLKSLPSELGKVGTLETLWVDDNAILDFPQSILALRRL 120
            MF+K+DTRK+PEIL   DD  +EL LGRR +EF     +++    +  +L NL+ +SLY N L  +     L   T L  LNLG N + +LP+ +G + +L  LWV+DN + + P  +  L +L
Sbjct:    1 MFIKRDTRKVPEILVDEDDSRKELKLGRREAEF-GGSTEMLLRPANAARLANLEYLSLYHNKLARLDHFETLCDCTALTGLNLGNNAISALPAAIGDLASLRRLWVEDNCLGELPDEVCRLEKL 123
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BLAST of mRNA_H-paniculata_contig2508.6822.1 vs. uniprot
Match: A0A7S2LF17_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LF17_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 6.960e-17
Identity = 54/118 (45.76%), Postives = 69/118 (58.47%), Query Frame = 0 
Query:    1 MFVKKDTRKIPEIL------------DDEPEELHLGRRSSEFVPNGVKVVCSSRHTGKLQNLQRMSLYDNMLTNVKGIGALSA-TPLKHLNLGRNQLKSLPSELGKVG-TLETLWVDD 104
            MFVKKD RKIPEIL            DD   EL L RR  EF    + V+C +++T    NL ++SLYD  L N+KGIG L   + L+ LNLGRN +K LP E   +  +L+ LW+DD
Sbjct:    1 MFVKKDLRKIPEILSSCDRSTEDDLTDDPLTELKLARRQGEF-HGTLNVLCDTQYTNHFSNLTKLSLYDCGLVNLKGIGMLGEHSRLEELNLGRNMIKELPPEFALLAESLKVLWLDD 117
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2508.6822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G880_ECTSI3.110e-6282.59Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A835YNM3_9STRA6.690e-3254.84Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
A0A485L9Z5_9STRA2.230e-2352.34Aste57867_17909 protein n=1 Tax=Aphanomyces stella... [more]
W4FL85_9STRA1.190e-2149.52Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6G0WAD8_9STRA2.190e-2143.22Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4FJA0_9STRA1.170e-1939.31Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A3R7BQF1_9STRA1.950e-1940.00Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A024TAP0_9STRA5.280e-1944.86Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A5A8DB09_CAFRO8.120e-1839.52Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A7S2LF17_9STRA6.960e-1745.76Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 140..161
e-value: 14.0
score: 12.2
coord: 74..94
e-value: 24.0
score: 10.2
coord: 47..69
e-value: 83.0
score: 5.7
coord: 117..139
e-value: 1.3
score: 18.1
coord: 209..231
e-value: 170.0
score: 3.1
coord: 232..255
e-value: 0.19
score: 20.8
coord: 163..186
e-value: 2.6
score: 17.0
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 140..159
e-value: 140.0
score: 4.9
coord: 232..251
e-value: 160.0
score: 4.5
coord: 117..136
e-value: 86.0
score: 6.6
coord: 163..182
e-value: 330.0
score: 2.1
coord: 186..205
e-value: 310.0
score: 2.3
coord: 74..90
e-value: 200.0
score: 3.8
coord: 209..228
e-value: 13.0
score: 12.8
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 149..252
coord: 21..186
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 45..250
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 19..261
e-value: 2.1E-50
score: 173.1
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 74..89
e-value: 1.7
score: 9.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 96..153
e-value: 1.8E-7
score: 30.8
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 142..163
score: 6.264
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 96..117
score: 5.871
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 234..255
score: 6.464
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 165..186
score: 6.387
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 73..94
score: 7.158
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 119..140
score: 7.419
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 49..70
score: 6.172
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 188..210
score: 5.856
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 211..232
score: 6.033

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2508contigH-paniculata_contig2508:428..5576 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2508.6822.1mRNA_H-paniculata_contig2508.6822.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2508 2..5748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2508.6822.1 ID=prot_H-paniculata_contig2508.6822.1|Name=mRNA_H-paniculata_contig2508.6822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=309bp
MFVKKDTRKIPEILDDEPEELHLGRRSSEFVPNGVKVVCSSRHTGKLQNL
QRMSLYDNMLTNVKGIGALSATPLKHLNLGRNQLKSLPSELGKVGTLETL
WVDDNAILDFPQSILALRRLQELRLSGNRIVEVPEEISSLSELRVLALDN
NDLKTVPKSIGTLLHLQSLLLRQNELEQLPEEMGELLDMRNLCISSNHLS
SLPPSLGKLLLLEFLYANGNRLGSLPEELSELVNLKKVNLSNNAIVTLPE
RLEAAWGRVDVLTGKLDPDTIGSPLKAEVIVRGNPFADAATANKHGHIIE
EVSMDESR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt