prot_H-paniculata_contig25.6806.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25.6806.1
Unique Nameprot_H-paniculata_contig25.6806.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length144
Homology
BLAST of mRNA_H-paniculata_contig25.6806.1 vs. uniprot
Match: D7FPR8_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR8_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 3.630e-73
Identity = 115/133 (86.47%), Postives = 124/133 (93.23%), Query Frame = 0
Query:   11 MHNNNAYGSQGKGASSNYGGGEYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKNLTIDIGQEVRSQNELINGMEGQMFDAGGLLGGTLRRINTMMAKGGSRHMCYLVAFIVFTFVAIWYILKHSRGGR 143
            MHN  A+GSQG+G SS   GG YYSAPTDRI+ETNHNIMEMQNNAHIDDLSDQVSRLK+LTIDIGQEVRSQN+LI+GMEGQMFDA GLLGGTLRRINTMMA+GGSRHMCYLVAFIVFTF+AIWYILK +RGGR
Sbjct:    1 MHN--AFGSQGRGGSST--GGGYYSAPTDRIKETNHNIMEMQNNAHIDDLSDQVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQTRGGR 129          
BLAST of mRNA_H-paniculata_contig25.6806.1 vs. uniprot
Match: A0A835YRV7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV7_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.490e-38
Identity = 68/119 (57.14%), Postives = 88/119 (73.95%), Query Frame = 0
Query:   28 YGGG----------EYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKNLTIDIGQEVRSQNELINGMEGQMFDAGGLLGGTLRRINTMMAKGGSRHMCYLVAFIVFTFVAIWYIL 136
            YGGG          E Y++ + R RET  N++EM+N+ HI +LS+QVS LK LTIDIG EV SQN L++GM   MFDA GLLGGT+++I TMM +GGS+HMCYLVAFIV TF+ IW+++
Sbjct:    3 YGGGFGQXXXXXXXEPYNSNSARARETARNMLEMENDRHISNLSEQVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLM 121          
BLAST of mRNA_H-paniculata_contig25.6806.1 vs. uniprot
Match: A0A4D9D9V6_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9V6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.340e-33
Identity = 69/149 (46.31%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    1 MRRRPENGDEMHNNNAYGSQGKGASSNYGGG----------EYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKNLTIDIGQEVRSQNELINGMEGQMFDAGGLLGGTLRRINTMMAKGGSRHMCYLVAFIVFTFVAIWYILKHS 139
            MRRRPE+     +     S  +GA   YGGG           YYS P DR+RE++ N+ E +NN  I DL+ QVS LK LTIDIG EVRSQN L++ M        GL+G T+RR+N M+    SRHM +LVAF+VF F+ ++YI++H 
Sbjct:    1 MRRRPEDNFSSSSYMPSNSNSRGA---YGGGMPQAGPGRQSNYYSTPEDRVRESSRNMFEEENNRRIGDLAGQVSMLKELTIDIGTEVRSQNHLLDDMGSGFLRTDGLMGSTMRRLNKMLTTSSSRHMLWLVAFVVFVFIFVYYIIRHK 146          
BLAST of mRNA_H-paniculata_contig25.6806.1 vs. uniprot
Match: B8C544_THAPS (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C544_THAPS)

HSP 1 Score: 110 bits (274), Expect = 3.030e-28
Identity = 63/131 (48.09%), Postives = 87/131 (66.41%), Query Frame = 0
Query:    7 NGDEMHNNNAYGSQGKGASSNYGGGEYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKNLTIDIGQEVRSQNELINGMEGQMFDAGGLLGGTLRRINTMMAKGGSRHMCYLVAFIVFTFVAIWYILK 137
            NG++M+NN   G +G+G     GG   +        ETN NIME QNN  I++LSDQV+RLK LTIDIG EVR QN L++ M     + G +L G+L RI TM+  GG++HMCYLVAF+VF  V ++++++
Sbjct:   13 NGEDMYNNLESG-RGRGGXXXRGGMSSH--------ETNANIMENQNNDRINELSDQVARLKGLTIDIGNEVREQNSLLDNMGEGFSNVGDMLTGSLARIGTMLESGGAKHMCYLVAFVVFVMVFLYWLVR 134          
BLAST of mRNA_H-paniculata_contig25.6806.1 vs. uniprot
Match: A0A7S2G7S7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7S7_9STRA)

HSP 1 Score: 109 bits (273), Expect = 3.410e-28
Identity = 50/109 (45.87%), Postives = 77/109 (70.64%), Query Frame = 0
Query:   31 GEYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKNLTIDIGQEVRSQNELINGMEGQMFDAGGLLGGTLRRINTMMAKGGSRHMCYLVAFIVFTFVAIWYILKHS 139
            G  + + +DR+ ETN  ++E QN++ I+ L+DQ+ RLK L+IDI +EV  QN +++GM  QM  A GLL  TL ++ TM+  GGS+HM YL+ F+VF+F+ I++I+ H 
Sbjct:   14 GNRWGSASDRVAETNRRLLEQQNDSSINTLADQLGRLKELSIDINEEVADQNRMLDGMGNQMNSASGLLNETLGKLGTMLKSGGSKHMVYLIGFVVFSFIMIYWIMTHK 122          
BLAST of mRNA_H-paniculata_contig25.6806.1 vs. uniprot
Match: A0A7S2NWZ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWZ0_9STRA)

HSP 1 Score: 109 bits (272), Expect = 5.910e-28
Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 0
Query:   43 ETNHNIMEMQNNAHIDDLSDQVSRLKNLTIDIGQEVRSQNELINGMEGQMFDAGGLLGGTLRRINTMMAKGGSRHMCYLVAFIVFTFVAIWYILKHS 139
            ETN NIME QNN  I DLS+QV+RLK LTIDIG EVR QN L++ M     + G LL GT+RRI T++ +GG++HM YLV F+V   V +++++KH 
Sbjct:   36 ETNSNIMEQQNNERIADLSEQVARLKGLTIDIGNEVREQNSLLDNMGDNFGNVGDLLNGTMRRIGTLLDRGGAKHMFYLVGFVVAVMVFLYWVMKHK 132          
BLAST of mRNA_H-paniculata_contig25.6806.1 vs. uniprot
Match: A0A7S2UA83_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA83_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.730e-27
Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 0
Query:   43 ETNHNIMEMQNNAHIDDLSDQVSRLKNLTIDIGQEVRSQNELINGMEGQMFDAGGLLGGTLRRINTMMAKGGSRHMCYLVAFIVFTFVAIWYILKHS 139
            ETN NIME QNN  ID+LS+QV+RLK LTIDIG EV+ QN L++ M     +   LL G+LRRI TM+  GG++HMCY+V F+VF  V +++++ H 
Sbjct:   88 ETNANIMEQQNNDRIDELSEQVARLKGLTIDIGNEVKEQNSLLDDMGDGFANTRDLLAGSLRRIGTMLESGGAKHMCYMVGFVVFVMVFLYWVMTHK 184          
BLAST of mRNA_H-paniculata_contig25.6806.1 vs. uniprot
Match: A0A7S2R889_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R889_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.000e-26
Identity = 50/97 (51.55%), Postives = 71/97 (73.20%), Query Frame = 0
Query:   43 ETNHNIMEMQNNAHIDDLSDQVSRLKNLTIDIGQEVRSQNELINGMEGQMFDAGGLLGGTLRRINTMMAKGGSRHMCYLVAFIVFTFVAIWYILKHS 139
            E N NIME QNN  ID+LS+QV+RLK LTI+IG EVR QN  ++ M+    + G LL G+LRRI +M+  GG++HMCY+VAF+VF  + +++I+ + 
Sbjct:   47 EMNANIMEEQNNDRIDELSEQVARLKGLTINIGNEVREQNSFLDNMQDGFANTGDLLAGSLRRIGSMLESGGAKHMCYMVAFVVFVMIFLYWIMTYK 143          
BLAST of mRNA_H-paniculata_contig25.6806.1 vs. uniprot
Match: A0A6T5SWN9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6T5SWN9_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.240e-26
Identity = 61/138 (44.20%), Postives = 87/138 (63.04%), Query Frame = 0
Query:    1 MRRRP-ENGDEMHNNNAYGSQGKGASSNYGGGEYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKNLTIDIGQEVRSQNELINGMEGQMFDAGGLLGGTLRRINTMMAKGGSRHMCYLVAFIVFTFVAIWYILK 137
            MR+RP  + D+M+NN   G  G+G      G   +        E N NIME QNN  I +LSDQV+RLK LT+DIG EV  QN L++GM     + G +L G+L R+  M+ +GG++HMCYLVAF+VF  V ++++++
Sbjct:    1 MRQRPPRSNDDMYNNLESGRGGRGGXXXGNGMSSH--------EANANIMESQNNDRISELSDQVARLKGLTLDIGNEVSEQNNLLDGMGDSFGNVGDMLTGSLARMGIMLERGGAKHMCYLVAFVVFVMVFLYWLVR 130          
BLAST of mRNA_H-paniculata_contig25.6806.1 vs. uniprot
Match: A0A7S2S2C5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2C5_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.670e-26
Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 0
Query:   30 GGEYYSAPTDRIRETNHNIMEMQNNAHIDDLSDQVSRLKNLTIDIGQEVRSQNELINGMEGQMFDAGGLLGGTLRRINTMMAKGGSRHMCYLVAFIVFTFVAIWYILKHSRG 141
            G   + +   R+ +TN  +ME QNN  I  L DQVSRLK LTIDI  EV  QN L+  M G+M  A  LL  TL ++  M+  GGS HM YL+ FIVF+F+ I++I+ H R 
Sbjct:   14 GSGLFGSADQRVADTNRRLMEQQNNGKISALEDQVSRLKELTIDINAEVEEQNRLLGDMGGEMSSASDLLQQTLGKLGVMLNSGGSSHMVYLIGFIVFSFLVIYFIMTHKRA 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25.6806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPR8_ECTSI3.630e-7386.47Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835YRV7_9STRA4.490e-3857.14Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A4D9D9V6_9STRA6.340e-3346.31t-SNARE coiled-coil homology domain-containing pro... [more]
B8C544_THAPS3.030e-2848.09t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2G7S7_9STRA3.410e-2845.87Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2NWZ0_9STRA5.910e-2854.64Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2UA83_9STRA2.730e-2753.61Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7S2R889_9STRA1.000e-2651.55Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A6T5SWN9_9STRA1.240e-2644.20Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2S2C5_9STRA1.670e-2647.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 42..109
e-value: 5.8E-5
score: 32.5
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 47..109
score: 13.089
NoneNo IPR availableGENE3D1.20.5.110coord: 49..110
e-value: 4.0E-12
score: 47.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..117
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 43..109
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
IPR039897BET1-like proteinPANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 28..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25contigH-paniculata_contig25:45850..50984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25.6806.1mRNA_H-paniculata_contig25.6806.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25 45686..51579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25.6806.1 ID=prot_H-paniculata_contig25.6806.1|Name=mRNA_H-paniculata_contig25.6806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bp
MRRRPENGDEMHNNNAYGSQGKGASSNYGGGEYYSAPTDRIRETNHNIME
MQNNAHIDDLSDQVSRLKNLTIDIGQEVRSQNELINGMEGQMFDAGGLLG
GTLRRINTMMAKGGSRHMCYLVAFIVFTFVAIWYILKHSRGGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR039897BET1