mRNA_H-paniculata_contig25.6802.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25.6802.1 vs. uniprot
Match: D7FPR4_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPR4_ECTSI) HSP 1 Score: 164 bits (416), Expect = 3.510e-45 Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 1
Query: 10 QVTDIENMCLLVDALRPDEQREVFARRGFLNVVNPVFPDRYYRLDLSMWDEREMAKILIRLAITEPGENWIDETYERKVELGPLPGWELPLDWTS 294
+VTD NMCLLVDALRPDE+REV ARRG+LNVVNP+F DRYY L+L++WDEREMAKIL+ LAITEPGENW+DETY R E+G L GWELPLDWT
Sbjct: 722 KVTDTGNMCLLVDALRPDEEREVLARRGYLNVVNPIFADRYYHLNLAVWDEREMAKILVHLAITEPGENWLDETYTRSPEIGALYGWELPLDWTQ 816
BLAST of mRNA_H-paniculata_contig25.6802.1 vs. uniprot
Match: T0QSD8_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QSD8_SAPDV) HSP 1 Score: 120 bits (300), Expect = 1.910e-29 Identity = 52/100 (52.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query: 1 LLIQVTDIENMCLLVDALRPDEQREVFARRGFLNVVNPVFPDRYYRLDLSMWDEREMAKILIRLAITEPGENWIDETYERKVELGPLPGWELPLDWTSPD 300
L ++ D+EN ++DAL EQ+EV G+LN++NP PDRYY LDL++ DERE+AKI + LA+TEPGENWI+ET+ + P+PGW+LP+ WT D
Sbjct: 1224 LFARIIDLENFATILDALSLPEQKEVARSLGWLNILNPKVPDRYYELDLAVRDERELAKIYVALAVTEPGENWINETFAWQRSEPPIPGWQLPISWTKED 1323
BLAST of mRNA_H-paniculata_contig25.6802.1 vs. uniprot
Match: A0A2D4C738_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C738_PYTIN) HSP 1 Score: 111 bits (277), Expect = 1.130e-28 Identity = 49/97 (50.52%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 10 QVTDIENMCLLVDALRPDEQREVFARRGFLNVVNPVFPDRYYRLDLSMWDEREMAKILIRLAITEPGENWIDETYERKVELGPLPGWELPLDWTSPD 300
++ DI N L DA+ PDEQ G+LN+ NP+FP+R Y LDLS+WDEREM K+L+ LAITEPGENWI++++ +PGW+LP+ W D
Sbjct: 52 RIIDIANFHRLFDAMTPDEQYVCAKSLGWLNIFNPMFPERAYSLDLSIWDEREMTKLLVELAITEPGENWINQSFSMVRGEPGIPGWKLPVRWEKED 148
BLAST of mRNA_H-paniculata_contig25.6802.1 vs. uniprot
Match: A0A1V9ZMY6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMY6_9STRA) HSP 1 Score: 115 bits (288), Expect = 7.960e-28 Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 1 LLIQVTDIENMCLLVDALRPDEQREVFARRGFLNVVNPVFPDRYYRLDLSMWDEREMAKILIRLAITEPGENWIDETYERKVELGPLPGWELPLDWTSPD 300
L ++ DIEN+ ++DAL EQ+E+ G+LN++NP PDRYY LDL++ DERE+AK + LA+TEPGENWI+E++ P+PGW+LP+ W D
Sbjct: 1224 LFARIIDIENLATIIDALTLPEQKEIARTLGWLNILNPKSPDRYYELDLAVRDEREVAKTFVALAVTEPGENWINESFAWSKGEPPIPGWQLPISWAKED 1323
BLAST of mRNA_H-paniculata_contig25.6802.1 vs. uniprot
Match: A0A7S3YHR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YHR3_HETAK) HSP 1 Score: 110 bits (275), Expect = 2.330e-27 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1
Query: 13 VTDIENMCLLVDALRPDEQREVFARRGFLNVVNPVFPDRYYRLDLSMWDEREMAKILIRLAITEPGENWIDETYERKVELGPLPGWELPLDW 288
+ D ENM L++D L +E E+ R G+LN++NPV PDR Y +DLS+ D+RE+ I RLAI EPG+NWI E+Y R ++ P+PGWELP W
Sbjct: 159 IVDWENMHLVLDELTGEEYLEIAHRLGYLNLINPVHPDRLYAMDLSIPDQRELCSIFARLAIIEPGDNWIHESYRRSWDIVPIPGWELPRGW 250
BLAST of mRNA_H-paniculata_contig25.6802.1 vs. uniprot
Match: A0A1W0A877_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A877_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.150e-25 Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 10 QVTDIENMCLLVDALRPDEQREVFARRGFLNVVNPVFPDRYYRLDLSMWDEREMAKILIRLAITEPGENWIDETYERKVELGPLPGWELPLDWTSPD 300
++ D+EN + D+L EQRE G+LN+ NP PDRYY LDLS+ DERE+ KI + LA+TEPGENWI+E++ PLPGW+LP+ W D
Sbjct: 1225 RIIDLENFMEIFDSLTLPEQRECARTLGWLNIFNPKHPDRYYGLDLSIRDERELTKIFVSLAVTEPGENWINESFAWVKGDEPLPGWQLPVSWAKDD 1321
BLAST of mRNA_H-paniculata_contig25.6802.1 vs. uniprot
Match: A0A8J2WTH8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTH8_9STRA) HSP 1 Score: 107 bits (267), Expect = 5.470e-25 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 19 DIENMCLLVDALRPDEQREVFARRGFLNVVNPVFPDRYYRLDLSMWDEREMAKILIRLAITEPGENWIDETYERKVELGPLPGWELPLDWTSPD 300
D+EN + L P EQ E+ R G+LNV+NP+ P+R Y LDL +++REM K+L++LA++EPG NW DE Y ++ +PGWELP +W SPD
Sbjct: 1471 DLENFHTIFKFLEPREQHELVHRLGWLNVMNPLHPERVYVLDLRRYEDREMCKVLVKLAVSEPGANWNDEGYRWSIKDPYVPGWELPAEWASPD 1564
BLAST of mRNA_H-paniculata_contig25.6802.1 vs. uniprot
Match: F0YFV2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFV2_AURAN) HSP 1 Score: 107 bits (266), Expect = 7.460e-25 Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 1
Query: 10 QVTDIENMCLLVDALRPDEQREVFARRGFLNVVNPVFPDRYYRLDLSMWDEREMAKILIRLAITEPGENWIDETYERKVELGPLPGWELPLDW 288
+V D++N +VD L +E E+ R G++NV NPVF DR Y+L L + DER+MA +L+RLAI EPGENW+DE + RK L PGW+LP +W
Sbjct: 1425 RVVDLDNFYTVVDELDEEEIDELVFRLGYMNVYNPVFADRMYKLCLKVPDERQMAIVLVRLAIVEPGENWVDEKFRRKESLQWSPGWQLPAEW 1517
BLAST of mRNA_H-paniculata_contig25.6802.1 vs. uniprot
Match: A0A7S3XT96_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT96_HETAK) HSP 1 Score: 105 bits (261), Expect = 3.100e-24 Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 10 QVTDIENMCLLVDALRPDEQREVFARRGFLNVVNPVFPDRYYRLDLSMWDEREMAKILIRLAITEPGENWIDETYERKVELGPLPGWELPLDWTSPD 300
++ D+E+ L AL P E+ E+ R G LN++NP+ PD Y LDLS WDEREM K+L+ LA+ EPGENW+DE + P+P W L DWT+PD
Sbjct: 471 RLVDLEHAPRLWRALTPAEREELQHRLGVLNLMNPLDPDCSYDLDLSHWDEREMCKMLVELAVAEPGENWLDEAFHWSRARPPVPDWHLRRDWTTPD 567
BLAST of mRNA_H-paniculata_contig25.6802.1 vs. uniprot
Match: A0A7S1XZJ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZJ5_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.430e-24 Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 1
Query: 10 QVTDIENMCLLVDALRPDEQREVFARRGFLNVVNPVFPDRYYRLDLSMWDEREMAKILIRLAITEPGENWIDETYERKVELGPLPGWELPLDWTS 294
++ D+EN +++ L DE+RE+ R G LN+ NP+ PD +Y LDL ++RE+ K+L+RLA+ EPGENW+ E Y+ + P+PGWELPL W
Sbjct: 661 RIVDLENFDVIMTTLDDDEERELLHRLGGLNLKNPMKPDGFYFLDLRSREQRELCKMLVRLAVEEPGENWLGEEYQWSIHDEPVPGWELPLSWAE 755 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25.6802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25.6802.1 >prot_H-paniculata_contig25.6802.1 ID=prot_H-paniculata_contig25.6802.1|Name=mRNA_H-paniculata_contig25.6802.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp MCLLVDALRPDEQREVFARRGFLNVVNPVFPDRYYRLDLSMWDEREMAKIback to top mRNA from alignment at H-paniculata_contig25:15321..16167- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25.6802.1 ID=mRNA_H-paniculata_contig25.6802.1|Name=mRNA_H-paniculata_contig25.6802.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=847bp|location=Sequence derived from alignment at H-paniculata_contig25:15321..16167- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25:15321..16167- >mRNA_H-paniculata_contig25.6802.1 ID=mRNA_H-paniculata_contig25.6802.1|Name=mRNA_H-paniculata_contig25.6802.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at H-paniculata_contig25:15321..16167- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |