mRNA_H-paniculata_contig11048.680.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11048.680.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 186 bits (473), Expect = 2.020e-54 Identity = 89/182 (48.90%), Postives = 126/182 (69.23%), Query Frame = 2 Query: 2 LYDTWIKLPDGGDLKRVMTVYDGLGFTGAMGSADFTHAHWGCPPVLHSRLYAGKETIPTLAYEMIVDHSS*VLSVTKGYEGSQNDKTIVRLDEAMSKIRKDEPYVSTEFILINADGTTTTHQGVFIIVDGGYHKWRILICPMENPVSAKAIPWTQRLESARKHVECFHGILKRRFQIPRRAI 547 LYD ++ LP G DL++VM YD +GF GA+GS D TH +WG P +R+Y GKE PT+A+++ VDHS VL+VT+G+ G+ NDKTI+R D+A+++IR D Y ++ L DG +G +++VD GYHKWR LI P + P+ + +++RLESARK VEC+ GILK RF+I + AI Sbjct: 126 LYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAI 307
BLAST of mRNA_H-paniculata_contig11048.680.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 186 bits (473), Expect = 1.460e-53 Identity = 89/182 (48.90%), Postives = 126/182 (69.23%), Query Frame = 2 Query: 2 LYDTWIKLPDGGDLKRVMTVYDGLGFTGAMGSADFTHAHWGCPPVLHSRLYAGKETIPTLAYEMIVDHSS*VLSVTKGYEGSQNDKTIVRLDEAMSKIRKDEPYVSTEFILINADGTTTTHQGVFIIVDGGYHKWRILICPMENPVSAKAIPWTQRLESARKHVECFHGILKRRFQIPRRAI 547 LYD ++ LP G DL++VM YD +GF GA+GS D TH +WG P +R+Y GKE PT+A+++ VDHS VL+VT+G+ G+ NDKTI+R D+A+++IR D Y ++ L DG +G +++VD GYHKWR LI P + P+ + +++RLESARK VEC+ GILK RF+I + AI Sbjct: 217 LYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAI 398
BLAST of mRNA_H-paniculata_contig11048.680.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 176 bits (447), Expect = 8.290e-52 Identity = 90/179 (50.28%), Postives = 117/179 (65.36%), Query Frame = 2 Query: 2 LYDTWIKLP--DGGDLKRVMTVYDGLGFTGAMGSADFTHAHWGCPPVLHSRLYAGKETIPTLAYEMIVDHSS*VLSVTKGYEGSQNDKTIVRLDEAMSKIRKDEPYVSTEFILINADGTTTTHQGVFIIVDGGYHKWRILICPMENPVSAKAIPWTQRLESARKHVECFHGILKRRFQI 532 +YD I LP + G L V+ YD LGFTGAMGS D TH W P +R Y GKE PT+ Y++ VDH+ ++VT+G+ GS NDKT V D A+ KIR D+ Y F + N DGTTTT +G +++VD GYHKW+ILI P + P+S + +++RLES RK VECF GILK R +I Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRI 179
BLAST of mRNA_H-paniculata_contig11048.680.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 181 bits (459), Expect = 1.260e-51 Identity = 91/183 (49.73%), Postives = 121/183 (66.12%), Query Frame = 2 Query: 2 LYDTWIKLPDGGDLKRVMTVYDGLGFTGAMGSADFTHAHWGCPPVLHSRLYAGKETIPTLAYEMIVDHSS*VLSVTKGYEGSQNDKTIVRLDEAMSKIRKDEPYVSTEFILINADGTTTTHQGVFIIVDGGYHKWRILICPMENPVSAKAIPWTQRLESARKHVECFHGILKRRFQIPRRAIP 550 +Y I LP G K+VMT YD LGF+GA GS D TH WG P +R Y GKE PT+AY++ VDH+ VL+VT G+ GS NDK+I+R D A++KIR+D Y EF + ADGT +G +++VD GYHKW LI P + P+ + +++RLES RK VECF GI+K RF+I + +IP Sbjct: 201 MYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIP 383
BLAST of mRNA_H-paniculata_contig11048.680.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.550e-50 Identity = 92/184 (50.00%), Postives = 122/184 (66.30%), Query Frame = 2 Query: 2 LYDTWIKLP--DGGDLKRVMTVYDGLGFTGAMGSADFTHAHWGCPPVLHSRLYAGKETIPTLAYEMIVDHSS*VLSVTKGYEGSQNDKTIVRLDEAMSKIRKDEPYVSTEFILINADGTTTTHQGVFIIVDGGYHKWRILICPMENPVSAKAIPWTQRLESARKHVECFHGILKRRFQIPRRAI 547 +YD I LP + G+L RVM Y+ LGF GAMGS D TH W P R Y GKE PT+ Y++ V+H+ VL+VT+G+ GS NDKTI+ DEA+ +IR D+ Y F + DGTT T +G ++IVD GYHKWR+LI P + P+S + +++RLES RK VECF GILK RF+I + A+ Sbjct: 170 MYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAM 353
BLAST of mRNA_H-paniculata_contig11048.680.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 170 bits (430), Expect = 3.520e-48 Identity = 88/184 (47.83%), Postives = 118/184 (64.13%), Query Frame = 2 Query: 2 LYDTWIKLPD--GGDLKRVMTVYDGLGFTGAMGSADFTHAHWGCPPVLHSRLYAGKETIPTLAYEMIVDHSS*VLSVTKGYEGSQNDKTIVRLDEAMSKIRKDEPYVSTEFILINADGTTTTHQGVFIIVDGGYHKWRILICPMENPVSAKAIPWTQRLESARKHVECFHGILKRRFQIPRRAI 547 +YD I LP G+L VM YD LGF+GAMGS D TH W P +R Y GKE +PT+ Y++ V+H+ ++VT+G+ S NDKT V D + KIR D Y F + N DGTTTT +G +++VD GYHKW+IL+ P + P+S I +++RLES RK VECF GILK F+I + A+ Sbjct: 141 MYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAM 324
BLAST of mRNA_H-paniculata_contig11048.680.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 161 bits (407), Expect = 2.940e-46 Identity = 75/177 (42.37%), Postives = 118/177 (66.67%), Query Frame = 2 Query: 2 LYDTWIKLPDGGDLKRVMTVYDGLGFTGAMGSADFTHAHWGCPPVLHSRLYAGKETIPTLAYEMIVDHSS*VLSVTKGYEGSQNDKTIVRLDEAMSKIRKDEPYVSTEFILINADGTTTTHQGVFIIVDGGYHKWRILICPMENPVSAKAIPWTQRLESARKHVECFHGILKRRFQI 532 L+DTW+KLP G +LK V V+ G+ GA+ S D TH W P +R+ GKE PT+ E DH+ +++ TK Y GS+NDKTI++ D+++ +IR +EP+ S ++ L NADG+ T ++G +++VDGGY K +LI P+++ + + W++RLES RK +EC +G +K RF++ Sbjct: 21 LWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRL 197
BLAST of mRNA_H-paniculata_contig11048.680.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 164 bits (416), Expect = 1.150e-45 Identity = 93/212 (43.87%), Postives = 122/212 (57.55%), Query Frame = 2 Query: 2 LYDTWIKLP--DGGDLKRVMTVYDGLGFTGAMGSADFTHAHWGCPPVLHSRLYAGKETIPTLAYEMIVDHSS*VLSVTKGYEGSQNDKTIVRLDEAMSKIRKDEPYV----------------------------STEFILINADGTTTTHQGVFIIVDGGYHKWRILICPMENPVSAKAIPWTQRLESARKHVECFHGILKRRFQIPRRAI 547 +YD I LP + G L VM YD LGFTGA+GS D TH W P +R Y GKE PT+AY++ VDH+ ++VT+G+ GS NDKTIV D A+ KI D+ Y F + N DGTTTT +G +++VD GYHKW+ILI P + P+S + +++RLES RK VECF GILK RF+I + A+ Sbjct: 128 MYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAM 339
BLAST of mRNA_H-paniculata_contig11048.680.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 156 bits (394), Expect = 7.180e-44 Identity = 73/177 (41.24%), Postives = 113/177 (63.84%), Query Frame = 2 Query: 2 LYDTWIKLPDGGDLKRVMTVYDGLGFTGAMGSADFTHAHWGCPPVLHSRLYAGKETIPTLAYEMIVDHSS*VLSVTKGYEGSQNDKTIVRLDEAMSKIRKDEPYVSTEFILINADGTTTTHQGVFIIVDGGYHKWRILICPMENPVSAKAIPWTQRLESARKHVECFHGILKRRFQI 532 L+ TWI+LP+G DL+RV + Y LG+ GA+GS D TH W + + GKE T+ +E I DH+ +L+ TKGY G++NDKT+V+ D ++ ++ +EP+VS ++ + + G T H G ++I +GGYH+ +LICP + + W++RLES RK +EC G LK RF++ Sbjct: 21 LWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRL 197
BLAST of mRNA_H-paniculata_contig11048.680.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 159 bits (402), Expect = 1.030e-43 Identity = 76/177 (42.94%), Postives = 110/177 (62.15%), Query Frame = 2 Query: 2 LYDTWIKLPDGGDLKRVMTVYDGLGFTGAMGSADFTHAHWGCPPVLHSRLYAGKETIPTLAYEMIVDHSS*VLSVTKGYEGSQNDKTIVRLDEAMSKIRKDEPYVSTEFILINADGTTTTHQGVFIIVDGGYHKWRILICPMENPVSAKAIPWTQRLESARKHVECFHGILKRRFQI 532 L+ W+ LP+G LK+V Y +G GA+ S D TH W P + + GKE TL YE DHS +LS TKG+ G++NDKT+V+ D ++ ++R++EP+ S +F+L + +G TT H G ++IVDGGYH+ LICP + S W++R ES RK +EC G LK RF++ Sbjct: 155 LWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRL 331 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11048.680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11048.680.1 >prot_H-paniculata_contig11048.680.1 ID=prot_H-paniculata_contig11048.680.1|Name=mRNA_H-paniculata_contig11048.680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp MSKIRKDEPYVSTEFILINADGTTTTHQGVFIIVDGGYHKWRILICPMENback to top mRNA from alignment at H-paniculata_contig11048:5805..7019+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11048.680.1 ID=mRNA_H-paniculata_contig11048.680.1|Name=mRNA_H-paniculata_contig11048.680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1215bp|location=Sequence derived from alignment at H-paniculata_contig11048:5805..7019+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11048:5805..7019+ >mRNA_H-paniculata_contig11048.680.1 ID=mRNA_H-paniculata_contig11048.680.1|Name=mRNA_H-paniculata_contig11048.680.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at H-paniculata_contig11048:5805..7019+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |