mRNA_H-paniculata_contig2495.6783.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2495.6783.1
Unique NamemRNA_H-paniculata_contig2495.6783.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2495.6783.1 vs. uniprot
Match: D7FNU9_ECTSI (RNA binding / nucleic acid binding n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU9_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 1.170e-99
Identity = 192/264 (72.73%), Postives = 211/264 (79.92%), Query Frame = 3
Query:  252 MGDVGEMNHTIYVSNLNEKIKKAVLKKSLHSVFSQFGKIIDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKTESDKITKRAGTYVPRDKRKLPQAETGAVPGVQRAKVDNGTAVTAVAAGXXXXXXXXXXXXXXXIGDANQQRVL-----SLPPPPSVLWNPSYSDAVPHKILYATGLPPEITQIMLSKLFEQYPGFAEARMAPGGQAFIEFADEMQASHDAGIALDALNGFKLTSTNSLQLAFARKA 1028
            MGDVG +NHTIYVSNLNEKIKK +LKKSLHSVFSQFGKI+DIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAK+ESD +TK+AGTYVPRDKRKLP A+     G+ +A      A T   A XXXXXXXXXXXXXXX               ++P P   + +      VPH ILYATGLPPEITQ+MLSKLFEQYPGF+EARMAPGGQAFIEFAD+MQ    AGIAL+ALNGFKL++TN LQLAFARKA
Sbjct:    1 MGDVGVINHTIYVSNLNEKIKKPLLKKSLHSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKSESDVVTKKAGTYVPRDKRKLPSADASNGNGLHQAAP--APAATTPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGD------VPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPGGQAFIEFADQMQ----AGIALNALNGFKLSATNPLQLAFARKA 252          
BLAST of mRNA_H-paniculata_contig2495.6783.1 vs. uniprot
Match: A0A6V1NUL1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NUL1_HETAK)

HSP 1 Score: 211 bits (537), Expect = 2.910e-60
Identity = 127/261 (48.66%), Postives = 157/261 (60.15%), Query Frame = 3
Query:  279 TIYVSNLNEKIKKAVLKKSLHSVFSQFGKIIDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKTESDKITKRAGTYVPRDKRKLPQAETGAVPGVQRAKVDNGTAVTAVAAGXXXXXXXXXXXXXXXIGDANQQRVLSLPPPPSVLWNPSYSDA----------VPHKILYATGLPPEITQIMLSKLFEQYPGFAEARMAPG--GQAFIEFADEMQASHDAGIALDALNGFKLTSTNSLQLAFARK 1025
            TIY++NLNEKIKK VLKKSLHS+FSQFGKII+IVACRGLKL+GQAWV FA+ + ATNALRQMQGFPF+EK MRI FAK +SDK+ KR G Y P  KR+  +            +        +VAA                         +   P P+ +  P+++            VPH+IL+A  LP +  ++ML  LF+QY G+ E RM PG  G AFIEF DEMQ    AG AL  LNGFKLT  + LQL++ARK
Sbjct:   11 TIYINNLNEKIKKDVLKKSLHSIFSQFGKIIEIVACRGLKLRGQAWVCFADTAAATNALRQMQGFPFYEKPMRIAFAKNKSDKVLKREGVYDPAKKRRKMEXXXXXXXXXXXXE--------SVAA-------------------------MEQEPTPAAVVQPAFTAVQQVEQPVPANVPHRILFAQNLPDDCNEMMLDMLFQQYNGYKEVRMVPGKKGLAFIEFGDEMQ----AGYALQGLNGFKLTPQDLLQLSYARK 234          
BLAST of mRNA_H-paniculata_contig2495.6783.1 vs. uniprot
Match: A0A7S2UV81_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV81_9STRA)

HSP 1 Score: 210 bits (534), Expect = 3.250e-60
Identity = 127/253 (50.20%), Postives = 154/253 (60.87%), Query Frame = 3
Query:  273 NHTIYVSNLNEKIKKAVLKKSLHSVFSQFGKIIDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKTESDKITKRAGTYVPRDKRKLPQAETGAVPGVQRAKVDNGTAVTAVAAGXXXXXXXXXXXXXXXIGDANQQRVLSLPPPPSVLWNPSYSDAVPHKILYATGLPPEITQIMLSKLFEQYPGFAEARMAPG--GQAFIEFADEMQASHDAGIALDALNGFKLTSTNSLQLAFARK 1025
            N TIY++NLNEKIKK VLKKSLHS+FSQFGKII I ACRG+KL+GQAWVVF +K+ ATNALRQMQGFPF+EK MRI F+KT+SD + KR GTY  R KRK P A     P    A      A T  AAG                                   NP      P++IL+A GLP +  +++L  LF+QY GF+E RM PG  G AF+EF DEMQ    AG A+  LNGFKLT  ++L L++A +
Sbjct:    2 NETIYINNLNEKIKKEVLKKSLHSIFSQFGKIIQITACRGIKLRGQAWVVFQDKASATNALRQMQGFPFYEKPMRIAFSKTKSDVVAKRDGTYTKR-KRKAPPAPAPDAPAQPSAPF----AQTTAAAGKN---------------------------------NP------PNRILFAEGLPDDCNEMVLGMLFKQYIGFSEVRMVPGKSGIAFVEFEDEMQ----AGYAMTGLNGFKLTPNDTLSLSYAMR 206          
BLAST of mRNA_H-paniculata_contig2495.6783.1 vs. uniprot
Match: F0YDU7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDU7_AURAN)

HSP 1 Score: 199 bits (507), Expect = 3.370e-56
Identity = 118/253 (46.64%), Postives = 150/253 (59.29%), Query Frame = 3
Query:  273 NHTIYVSNLNEKIKKAVLKKSLHSVFSQFGKIIDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKTESDKITKRAGTYVPRDKRKLPQAETGAVPGVQRAKVDNGTAVTAVAAGXXXXXXXXXXXXXXXIGDANQQRVLSLPPPPSVLWNPSYSDAVPHKILYATGLPPEITQIMLSKLFEQYPGFAEARMAPG--GQAFIEFADEMQASHDAGIALDALNGFKLTSTNSLQLAFARK 1025
            N T+Y++NLNEKIKK  LKKS++SVFSQFGKI+D+V CRGLKL+GQAWVVFA+   ATNALRQMQGFPFF+K MRI FAK +SD ++K  G++V R+KRK       A P  +                                        L  P P       +  +A P  +L+A  LP +   +MLS LF+QY GF E RM PG  G AF+EFADE QAS    +AL  L+ FKLT T++L L+FA++
Sbjct:    7 NQTVYINNLNEKIKKDALKKSIYSVFSQFGKILDVVCCRGLKLRGQAWVVFADVGAATNALRQMQGFPFFDKPMRIAFAKAKSDVVSKADGSFVAREKRKREAPPPKAPPATE---------------------------------------ALEAPKPAKAA--KADKNATPSNVLFAQDLPDDCNDMMLSILFQQYGGFKEVRMVPGKKGIAFVEFADETQAS----LALQGLDNFKLTPTDTLALSFAKR 214          
BLAST of mRNA_H-paniculata_contig2495.6783.1 vs. uniprot
Match: A0A822AI92_9NEOB (U1 small nuclear ribonucleoprotein A n=4 Tax=Tetrapoda TaxID=32523 RepID=A0A822AI92_9NEOB)

HSP 1 Score: 198 bits (503), Expect = 2.030e-55
Identity = 118/254 (46.46%), Postives = 160/254 (62.99%), Query Frame = 3
Query:  273 NHTIYVSNLNEKIKKAVLKKSLHSVFSQFGKIIDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKTESDKITKRAGTYVPRD-KRKLPQAETGAVPGVQRAKVDNGTAVTAVAAGXXXXXXXXXXXXXXXIGDANQQRVLSLPPPPSVLWNPSYSDAVPHKILYATGLPPEITQIMLSKLFEQYPGFAEARMAPGGQ--AFIEFADEMQASHDAGIALDALNGFKLTSTNSLQLAFARK 1025
            NHTIY++NLNEKIKK  LKKSL+++FSQFG+I+DI+  R LK++GQA+V+F E S ATNALR MQGFPF++K MRIQ+AKT+SD I K  GT+V RD KR+  + ++   P  ++A V  G A   +A                         +  LP  P +  NP      P+ IL+ T LP E  ++MLS LF Q+PGF E R+ PG    AF+EF +E+Q    AG A DAL GFK+T  N+++++FA+K
Sbjct:    9 NHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPAAKKA-VQGGAAALWLAL----------------------SSLYRLPSFPQLSENP------PNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQ----AGAARDALQGFKITQNNAMKISFAKK 229          
BLAST of mRNA_H-paniculata_contig2495.6783.1 vs. uniprot
Match: A0A8J2X4I1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4I1_9STRA)

HSP 1 Score: 197 bits (500), Expect = 3.660e-55
Identity = 122/255 (47.84%), Postives = 150/255 (58.82%), Query Frame = 3
Query:  267 EMNHTIYVSNLNEKIKKAVLKKSLHSVFSQFGKIIDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKTESDKITKRAGTYVPRDKRKLPQAETGAVPGVQRAKVDNGTAVTAVAAGXXXXXXXXXXXXXXXIGDANQQRVLSLPPPPSVLWNPSYSDAVPHKILYATGLPPEITQIMLSKLFEQYPGFAEARMAPG--GQAFIEFADEMQASHDAGIALDALNGFKLTSTNSLQLAFARK 1025
            E N T+Y++NLNEKIKK  LKKS++SVFSQFGKI+D+V CRGLKL+GQAWVVFA+   ATNALRQMQGFPF++K MRI FAK++SD I KR GT+ PR+KRK               + D   A  A A                  GDA         PPP V                 + LP + + +ML  LF+QY GF E RM PG  G AF+EFADE QAS    +A   L+GFKLT T++L L FA++
Sbjct:    5 EPNQTVYINNLNEKIKKDALKKSIYSVFSQFGKILDVVCCRGLKLRGQAWVVFADVGAATNALRQMQGFPFYDKPMRIAFAKSKSDMIAKRDGTFKPREKRK---------------REDPKPAAPAAAKALPAP------------GDA---------PPPKVXXXXXXXXXX---XXXXSNLPEDCSDMMLGILFQQYAGFKEVRMVPGNKGIAFVEFADETQAS----LARQGLDGFKLTPTDALSLVFAKR 216          
BLAST of mRNA_H-paniculata_contig2495.6783.1 vs. uniprot
Match: A0A3Q1F7D3_9TELE (U1 small nuclear ribonucleoprotein A n=5 Tax=Ovalentaria TaxID=1489908 RepID=A0A3Q1F7D3_9TELE)

HSP 1 Score: 196 bits (498), Expect = 6.660e-55
Identity = 116/254 (45.67%), Postives = 155/254 (61.02%), Query Frame = 3
Query:  270 MNHTIYVSNLNEKIKKAVLKKSLHSVFSQFGKIIDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKTESDKITKRAGTYVPRDKRKLPQAETGAVPGVQRAKVDNGTAVTAVAAGXXXXXXXXXXXXXXXIGDANQQRVLSLPPPPSVLWNPSYSDAVPHKILYATGLPPEITQIMLSKLFEQYPGFAEARMAPGGQ--AFIEFADEMQASHDAGIALDALNGFKLTSTNSLQLAFARK 1025
            +NHTIY++NLNEKIKK  LKKSL+++FSQFG+I+DI+  R LK+KGQA+V+F E + A+NALR MQGFPF++K MRIQ+AK +SD I K  GTYV RD++K  +   G   G  +  V  G A   + AG                                V  NP      P+ IL+ T LP E  ++MLS LF Q+PGF E R+ PG    AF+EF +E+Q    AG A DAL GFK+T TN+++++FA+K
Sbjct:    5 LNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARNLKMKGQAFVIFKEVNSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKPKGTEGGGTKKGVPGGAA--PMVAG--------------------------------VAENP------PNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENEVQ----AGAARDALQGFKITQTNAMKISFAKK 214          
BLAST of mRNA_H-paniculata_contig2495.6783.1 vs. uniprot
Match: A0A3B4FC71_9CICH (U1 small nuclear ribonucleoprotein A n=3 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B4FC71_9CICH)

HSP 1 Score: 196 bits (498), Expect = 6.880e-55
Identity = 115/254 (45.28%), Postives = 155/254 (61.02%), Query Frame = 3
Query:  270 MNHTIYVSNLNEKIKKAVLKKSLHSVFSQFGKIIDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKTESDKITKRAGTYVPRDKRKLPQAETGAVPGVQRAKVDNGTAVTAVAAGXXXXXXXXXXXXXXXIGDANQQRVLSLPPPPSVLWNPSYSDAVPHKILYATGLPPEITQIMLSKLFEQYPGFAEARMAPGGQ--AFIEFADEMQASHDAGIALDALNGFKLTSTNSLQLAFARK 1025
            +NHTIY++NLNEKIKK  LKKSL+++FSQFG+I+DI+  R +K+KGQA+V+F E + A+NALR MQGFPF++K MRIQ++KT+SD I K  GTYV RD++K    E   + G        G A  A+ AG                                V  NP      P+ IL+ T LP E  ++MLS LF Q+PGF E R+ PG    AF+EF +E+Q    AG A DAL GFK+T TN+++++FA+K
Sbjct:    8 LNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARNIKMKGQAFVIFKEINSASNALRSMQGFPFYDKPMRIQYSKTDSDIIAKMKGTYVERDRKK----EKKKIKGPDGTGPKKGVAGAAMVAG--------------------------------VAENP------PNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENEVQ----AGAARDALQGFKITQTNAMKISFAKK 215          
BLAST of mRNA_H-paniculata_contig2495.6783.1 vs. uniprot
Match: UPI001B34A0F6 (U1 small nuclear ribonucleoprotein A isoform X3 n=1 Tax=Ochotona curzoniae TaxID=130825 RepID=UPI001B34A0F6)

HSP 1 Score: 196 bits (499), Expect = 1.070e-54
Identity = 117/254 (46.06%), Postives = 161/254 (63.39%), Query Frame = 3
Query:  273 NHTIYVSNLNEKIKKAVLKKSLHSVFSQFGKIIDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKTESDKITKRAGTYVPRD-KRKLPQAETGAVPGVQRAKVDNGTAVTAVAAGXXXXXXXXXXXXXXXIGDANQQRVLSLPPPPSVLWNPSYSDAVPHKILYATGLPPEITQIMLSKLFEQYPGFAEARMAPGGQ--AFIEFADEMQASHDAGIALDALNGFKLTSTNSLQLAFARK 1025
            NHTIY++NLNEKIKK  LKKSL+++FSQFG+I+DI+  R LK++GQA+V+F E S ATNALR MQGFPF++K MRIQ+AKT+SD I K  GT+V RD KR+  + ++   P  ++A    G A   V A                 G+   Q   +  P     ++   S+  P+ IL+ T LP E  ++MLS LF Q+PGF E R+ PG    AF+EF +E+Q    AG A DAL GFK+T  N+++++FA+K
Sbjct:   12 NHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPSAKKA-AQGGAAAPVVGA---------------VQGNGVPQGCCAHGP-----FSLQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQ----AGAARDALQGFKITQNNAMKISFAKK 240          
BLAST of mRNA_H-paniculata_contig2495.6783.1 vs. uniprot
Match: A0A212DDH7_CEREH (U1 small nuclear ribonucleoprotein A n=3 Tax=Laurasiatheria TaxID=314145 RepID=A0A212DDH7_CEREH)

HSP 1 Score: 196 bits (497), Expect = 1.270e-54
Identity = 117/254 (46.06%), Postives = 158/254 (62.20%), Query Frame = 3
Query:  273 NHTIYVSNLNEKIKKAVLKKSLHSVFSQFGKIIDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKTESDKITKRAGTYVPRD-KRKLPQAETGAVPGVQRAKVDNGTAVTAVAAGXXXXXXXXXXXXXXXIGDANQQRVLSLPPPPSVLWNPSYSDAVPHKILYATGLPPEITQIMLSKLFEQYPGFAEARMAPGGQ--AFIEFADEMQASHDAGIALDALNGFKLTSTNSLQLAFARK 1025
            NHTIY++NLNEKIKK  LKKSL+++FSQFG+I+DI+  R LK++GQA+V+F E S ATNALR MQGFPF++K MRIQ+AKT+SD I K  GT+V RD KR+  + ++   P  ++A V  G A   V A                         +  P P         S+  P+ IL+ T LP E  ++MLS LF Q+PGF E R+ PG    AF+EF +E+Q    AG A DAL GFK+T  N+++++FA+K
Sbjct:    9 NHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPAAKKA-VQGGAAAPVVGA-------------------------VQGPVP--------LSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQ----AGAARDALQGFKITQNNAMKISFAKK 224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2495.6783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNU9_ECTSI1.170e-9972.73RNA binding / nucleic acid binding n=2 Tax=Ectocar... [more]
A0A6V1NUL1_HETAK2.910e-6048.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UV81_9STRA3.250e-6050.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YDU7_AURAN3.370e-5646.64Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A822AI92_9NEOB2.030e-5546.46U1 small nuclear ribonucleoprotein A n=4 Tax=Tetra... [more]
A0A8J2X4I1_9STRA3.660e-5547.84Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A3Q1F7D3_9TELE6.660e-5545.67U1 small nuclear ribonucleoprotein A n=5 Tax=Ovale... [more]
A0A3B4FC71_9CICH6.880e-5545.28U1 small nuclear ribonucleoprotein A n=3 Tax=Perco... [more]
UPI001B34A0F61.070e-5446.06U1 small nuclear ribonucleoprotein A isoform X3 n=... [more]
A0A212DDH7_CEREH1.270e-5446.06U1 small nuclear ribonucleoprotein A n=3 Tax=Laura... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2495contigH-paniculata_contig2495:378..12641 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score319.3
Seed ortholog evalue1.6e-84
Seed eggNOG ortholog2880.D7FNU9
Preferred nameSNRPB2
KEGG koko:K11091,ko:K11094
KEGG Pathwayko03040,map03040
KEGG ModuleM00351,M00352
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000245,GO:0000354,GO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0001650,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005685,GO:0005686,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006325,GO:0006342,GO:0006355,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007530,GO:0007538,GO:0007539,GO:0007542,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0008380,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0015030,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0016607,GO:0017069,GO:0018992,GO:0018993,GO:0019099,GO:0019219,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030237,GO:0030532,GO:0030619,GO:0030620,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0034401,GO:0034622,GO:0034641,GO:0035613,GO:0035614,GO:0036002,GO:0040029,GO:0042802,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0044703,GO:0044877,GO:0045292,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048024,GO:0048468,GO:0048477,GO:0048519,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070828,GO:0070868,GO:0070990,GO:0071004,GO:0071005,GO:0071007,GO:0071010,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097157,GO:0097158,GO:0097159,GO:0097525,GO:0097549,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1902679,GO:1903311,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.snRNA stem-loop binding
EggNOG OGsKOG4206@1,KOG4206@2759
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-12_003280.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons7
Model size2041
Cds size780
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929731.1422045-UTR-H-paniculata_contig2495:377..13871622929731.1422045-UTR-H-paniculata_contig2495:377..1387Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2495 378..1387 -
1691480986.6241474-UTR-H-paniculata_contig2495:377..13871691480986.6241474-UTR-H-paniculata_contig2495:377..1387Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2495 378..1387 -
1622929731.2814555-UTR-H-paniculata_contig2495:12390..126411622929731.2814555-UTR-H-paniculata_contig2495:12390..12641Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2495 12391..12641 -
1691480986.7092814-UTR-H-paniculata_contig2495:12390..126411691480986.7092814-UTR-H-paniculata_contig2495:12390..12641Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2495 12391..12641 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929731.1561267-CDS-H-paniculata_contig2495:1387..14711622929731.1561267-CDS-H-paniculata_contig2495:1387..1471Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 1388..1471 -
1691480986.6386962-CDS-H-paniculata_contig2495:1387..14711691480986.6386962-CDS-H-paniculata_contig2495:1387..1471Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 1388..1471 -
1622929731.1714718-CDS-H-paniculata_contig2495:2843..29091622929731.1714718-CDS-H-paniculata_contig2495:2843..2909Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 2844..2909 -
1691480986.6473331-CDS-H-paniculata_contig2495:2843..29091691480986.6473331-CDS-H-paniculata_contig2495:2843..2909Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 2844..2909 -
1622929731.207377-CDS-H-paniculata_contig2495:4068..42351622929731.207377-CDS-H-paniculata_contig2495:4068..4235Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 4069..4235 -
1691480986.6555562-CDS-H-paniculata_contig2495:4068..42351691480986.6555562-CDS-H-paniculata_contig2495:4068..4235Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 4069..4235 -
1622929731.2245386-CDS-H-paniculata_contig2495:5410..56121622929731.2245386-CDS-H-paniculata_contig2495:5410..5612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 5411..5612 -
1691480986.6658251-CDS-H-paniculata_contig2495:5410..56121691480986.6658251-CDS-H-paniculata_contig2495:5410..5612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 5411..5612 -
1622929731.2401621-CDS-H-paniculata_contig2495:6111..62131622929731.2401621-CDS-H-paniculata_contig2495:6111..6213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 6112..6213 -
1691480986.6759713-CDS-H-paniculata_contig2495:6111..62131691480986.6759713-CDS-H-paniculata_contig2495:6111..6213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 6112..6213 -
1622929731.2558722-CDS-H-paniculata_contig2495:9088..91551622929731.2558722-CDS-H-paniculata_contig2495:9088..9155Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 9089..9155 -
1691480986.6852498-CDS-H-paniculata_contig2495:9088..91551691480986.6852498-CDS-H-paniculata_contig2495:9088..9155Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 9089..9155 -
1622929731.269813-CDS-H-paniculata_contig2495:12298..123901622929731.269813-CDS-H-paniculata_contig2495:12298..12390Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 12299..12390 -
1691480986.6977634-CDS-H-paniculata_contig2495:12298..123901691480986.6977634-CDS-H-paniculata_contig2495:12298..12390Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2495 12299..12390 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2495.6783.1prot_H-paniculata_contig2495.6783.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2495 1388..12390 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2495.6783.1

>prot_H-paniculata_contig2495.6783.1 ID=prot_H-paniculata_contig2495.6783.1|Name=mRNA_H-paniculata_contig2495.6783.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=260bp
MGDVGEMNHTIYVSNLNEKIKKAVLKKSLHSVFSQFGKIIDIVACRGLKL
KGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKTESDKITKRAGTY
VPRDKRKLPQAETGAVPGVQRAKVDNGTAVTAVAAGTTGVVAAAQLAPVG
PIGDANQQRVLSLPPPPSVLWNPSYSDAVPHKILYATGLPPEITQIMLSK
LFEQYPGFAEARMAPGGQAFIEFADEMQASHDAGIALDALNGFKLTSTNS
LQLAFARKA*
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mRNA from alignment at H-paniculata_contig2495:378..12641-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2495.6783.1 ID=mRNA_H-paniculata_contig2495.6783.1|Name=mRNA_H-paniculata_contig2495.6783.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12264bp|location=Sequence derived from alignment at H-paniculata_contig2495:378..12641- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGACACGGACAGTAGACTAAATCTAGCGGATATTGGTCAAGATAGAAGCT CTAGAAACCGTTGTGTGTACCCTGTTGGAGCTAATCTGGCCCACGCATAT CTTAAGCCTTCAATTCATCGTATTTTTCGCTTTGAATAACTGTGTGCGGC GAGGAGGGCTGAGGAAAAGGGGCCAGCGGAACGCAGCTTTTTCAAACTAC AGTGAAGTGTTGGCGGTCCAGAGCAGCTCCAACTAGCTCAATCATCTAAT CATGGGAGACGTTGGTGAGATGAACCACACCATCTACGTGAGCAATCTCA ATGAGAAGATTAAGAAGGCAGTGCTCAAGAAGTCCTTGCACAGGTATGAA GCCACCGACAACTGGTCGGTAGCAGTGGCTTGTTGTTGTAATCATTTTTA CGTTGCGAAGTGCTGGAAACTGAAGCTCTCAGTGGCAGGCAAGCGAAGCC TATATGGCGTTACAGTAGTGACAATGTATTATGGAGAATACGCAGTTATT GGATGTGCAGTTGGTCCTCTTGTCACACATATCCTGCTATTGCACGTCCT GTTATAGCTCCTGAATAGTGCATTTATTGCAGATGTGTACTGCCAGCTAC CTCGGCTGTGAGCAATCTAGTTCGACCTGCGTCTGTCGGCGTGGACATGG TGATGGGGAGTGGGAGTTATCTAGTTGCTGTCGTCGCCTCCTTGTAAACA ACGATTATTAATAGAGCTACTGTAATAGAGCATTGTTCGTTGGGTCAGGT GTTGGCTGGTATTTATTAAATAAGATGTCCAAAAGTCCAAAACAGTTGAC GTCTGGCTCGTGCAGGGCTGCAAATTAACTTCACAGTGTTGTTTTCGCTG GATCATTCAAGTCTTCAACAAGTCGCGCGCTTTTTTCCTGTTCTAGGTTT ACGTGTTGTGTTGTAAGGCATAGACTTGCAATTTGTTGGGAGCTTTGTTG GGTCCATCTTGAGTCAACATTTCATGTTCATTCGGCATTTGTTCCGTTGT ATTTACCGACAGTTGAGGCTACTATTAAAACATACATTAACTCATCTATG CAGTACAGTCAGTGACAGTTAAGTGTTACATTCATCATCGCTTCGCAGGA GGCTATGTCATATTCCAAAAATTGTAGTACATCCAAGTGTCGTTGGTTTT TGTACACTGGAACGCCGCCACGGAACTACAGCAGTGTTGCACCGGACTGA CTGTTTTTTCAGCATTGTCCAAAAAATGACATCGAGCGACGTCAATGGGC TTGAAAAAGTTGCGAAGCTGAAAAATAGGGGTACTCGATGAGGGATGCGT TATATACGTACGTCCTCGAAGAAGATCGGAAACATTTCATTACGCTCAGC GCACAAACGGCTAGTGTATATATAGTGTATAGAGCTCTATAACGTGAAGA AAATGCGCAAGGTAAGCATAAGCTGTACAAATCGGAAAGTTATTTTCCGA TCTCTTACTCGAGAGCAGTAATGGTGGATATCTCACGCTACACTCGTACA GAGACTACATAACTGCACAGGCTAACACCCCCTATGACTATTTACCGTCA GCGCTAAAAATCGTACGTATCGCGAGAGATGGTGGTTGTGATATAAGGAG AAACACATTTGTCTAGGTCGATCTCCCATTCAAAATATAAAAATCGCTCC AGGCGTCACTCTGACAGTAAACAGTAGAGTCTGGGTGCAGGACAAGTACC ATACTCATATCGAAATGGTATAGCACACCGCAATCACGATACAGCCAGTA GTATGTGTGTCTTGATCGATCTCTGTTGTCGTGCCCTGTCCGTGTTTTCA AGAATAGAAGATAAAACCGCCGCAGAAACATGAGTACACATATTCTATTG CCAACACAGAGAGCCATCACGACATACATGACGATATCTTTCAAAAGCAA GATAAGCATAGTTAGTGCAAGGTTTAAAGTAGAACACGCATAGTCTCATC TACTACCTCATCTCATAAATGACTGTACTGTAACATTCATGTTGTGCCCT AGACTTCTATTTAGAGTGCTCTCCGTCTCTCTTTCTCTCCCCCCCCCCCA CCCTTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTTTTGCTAGTCGAT TCTGTACTGTGTTGCAATTGCCCGTTATAACTCAAGTCCCCGTCACGTCG GTACCGTAGTGACCGGTGACACGGAACGGCGAGTCTTCGAAAAACACCTC ATCGATATCTGTCGTTGGATACCCCTGAATAGATGGAATCTTCTAGACAA CGCAGGACAGCGGCTTGCCTCTTGGCTGAGATCACGCTCTGAGAACACAA CCTTTGTAACACAATGCAACCTGTAACTTACACTGCGATATGCGTCCCAA AAGTTGTGATGATCGCCGCTGCCAAGGAAGTTAACTTTTGCTAGAAAGAA ATGAGTGTGAATGATAGGAGACAACAACTTGCTTTGCTTCCAACGACACA CATGAATATATTCATGCATACATAGATGGTCTACGCATGTACTATTCCGG TAGAAAGAATGAAAGGAATCTAACAATATAATAAATGGCGACTTGTCTAC GAAGTGGACAATGGTTGGTTCAACTTCCATCCAGCCCCCGTCGTGATCAC CAGGGAAATCAATATTCTATTTTACGTAACATTTGAGTATCCGGTTTTCC TCTGTCGAAACGAGGGAAAGAGCAAAATAGCCTCCAAACATTCTACGACA CAAGTCACAGCTAAATTACACTACACCAATGGTGTCGGTGTCGGTGTCGG TGTCGCTGCACTTGAAGTCCACGCACGCGGACTCGCTGCGCTCGCCATGG CTTCCTTAAGCTCACATGCAGGGGTACTGTGTGTCTGTTACCCCCACAAC ACATCCCCAGCCCTGCAGGACGTCGCCTAATAGAACACAGCCATTCAAAA GTTTAACGACCAAGCCTGCACGAGTGATCGACTCACCTGCAGCGCCGGAG GATCCCCCTATCCCCCTGTAGGGATCTTGTAATCCCAAAACAAGTAAAAA ATGTATGGGAAACATAGCGTTGGTAATTGGCTCTTGAAATGAAGAAATGT GCACGATTGGCCTGAACCTATGCTTGTCGTTTGCCGTTCCAAACCATAGT CCAGAAGTGTGAGGCCAAAATCCCCCCTCCCTCCACTCGTGAAAAAGGAT CCCTCACCCCCCTTTTCGACGGCAGGACTTTCAGATGCTATTCGTTTCGA AACATCGTCCGACGCCAGAAGGGATAACTGAGGATGCTCATAAACTTAAC TTGGCTGCACCAGCGGTCAAGTTACTTTTTGAAGTGCATTTAAATTTTTC TTCATGATGACGAAAAGGGCGAGATTGGACATAAAAGATAAAGCCGATTT TTGTTTTCCGTTCCTAGACGTTTGGCCATCGCTGTTGCTCTCCTGCGAAG GTGTGTTCATGTGTTCACGTGTCTTATCTATCTGTTTTGTTTGTCTGTCT GTATGTCTGCTGGTGTCTCTTCGTTCGCGACGGCAGTGTATTCAGTCAGT TCGGCAAGATCATCGACATCGTGGCATGCCGAGGACTGAAGCTCAAAGGA CAGGTGAGCAAATAAAGACAGCAAAAAAGAGGGCTACTAACTCTACAAAG CAAAGGGTCAGAGTTGGAATTCATCTCGACGGCAACCTCAGTCTCCCCTC CCCCCCCCCCACCCCCTCCTCCTTGAACCGTATCAGAGTCATGTCATGAT CCTGTTGCGGGGATATTTATCCATGGTTGTAGAACGGCTCCAACACCGTT ATTTAATGTACTGCACATTTTTTTATTCGTTGTTGGGCCACGGGCTCCCC CACCGTGCACTGCAAAATTTGTCTTCGTTGCGAAGGTGAGGTTATACTTA CGTCGGCCGTTATTTTACGGCTTCAAGCGTTACTTGGATACAGACGGGAA AGGAAACATTAAGCATTGTTCGGGAACTAATAACAACGACCATTTTATCG TGTAAGATATGTACGTCATCTCTCTCATGTCATAAGTCTAGGGGATTAGG GTCTTACGGTCGTAAATTTGGATCAAGTTAGATTCGTCAAGCACCAAGTA TTCCATTCGAAAGCTCTGGATATCAGCTATCTTCTACATATCGGAGATGT AGGATTCCGACTGGGGCATATGCTCCGAGTTCGGGATAACTGTTGGGGGT GCGGAAATGATCACACAGTATTTGCTCACACCAGCCCACGCGCAGCCCAA TGGCGAGCCGTGCAATCTCGTCGTCAAACCCTTCCTGCAAGCCCATCACA ACACAAGTTAGCCAGGTAGTTCTTGTTTAGTCGTACTCAACGAAGGGTGC ATTGCTGACACGTTTGGGACAGCTGAATATTCCCAGCTGGAAGAGCCAGA GCGTACCGCACGATCAAACCGAAGCGAGCTTCCGTAGAGAGTTTGATGCG TTCGACGCGTGCGGATGGGTTTGCAGGGTTTGACGACGAGGGTTGCGTAG CTCACCATTGTGCTGGTGTGTGTATGCTCCCATGCACCGAAAGATAGCGG CGGGGTTTGTGCAAATACTGTATCATCATTTCCGCAACCCCAACAGTTAT CCCGGACTTCGAGCATATCCCCCAGTCGGAATCCTACACCTCCGATATGT AGAAGATAGCTGATATTCAGGACTGTCGAACGGTATGCCTGGTGTTTGAT GAATCCAACTTGATCCAAAGTTATGACTGTAAAAACCTGGTTCACTAGAC TTATGAGACGGAGGAGTATATATATATATATACTACTATGGGACATAGTT AGGAGATGCTCTATCTCGCCATACTTCGGCACATACAATAAATTCCCAAT TTTTGGCCCCTAATCGGGTAGTGTTTGGTCCATAACTTTGTCCAGAAACA CTATGCGCAAAACCAGGGATCTCCGTAGAGCCTGAGAACTGATGCTTCCA ACGAATCAAGAATCATTTAAGTCTGATGTGCTTTGAACATGTTACAACCG CAAATGCAGTCACTTGGCCCCTAACAACGGAAATCTCACTCTAGCGAAAG AGACTTTTGCGCAAGGGTTCGCACAGGTTGAAAAGTTGCTGGGGGCTTCC TTCGCACAAGGCGCGAAGAAATACAAGGAGACTTTTGGAAATTTGTCCTG TTGCGCTATATATCGTTGTTTTGGTGCATGTAGAGATGGGCGGTGGTGCA GCGTTGTACTGTAGTCGTGATTTACACAAGGGTGTGTGAACGATGACGGG TGTTCATTTGCTTGACTTTGGTGCTCTCTAGTAGATGAATACTCTCTCAA TACCGTTAATAAACGTGATCAGTTGTGCGAAGCGCTTGCGCTCTAATGAC TTGAAACTATTGTTTTTTTTCCTCACCCAGATTGCTTCTTGTATTTCCAT TGGCACGACTCGAAACCACGTCCAGCGCATCATTTTTGGTGATTGCTGGT TATTTTAAGAACCGCTAAAAGCCACTCTTGCCTAATCGTACCGTTACGTC AACCATGTTACCTTTTTGCGGCCGGTTTTGTGCTTGTAATCTTATTCGTT TTTTTTTGCCATATTCCACTATGTTCGGTTTTTCGAAAGTAAGTCCGTCG ATGCATCAATTAATATATATATATATATTTGTGACATGTTTCTATTGTTA ATGCCGGAAAATTGACGAGGGGTATTTTCATTTTTTGTTTCTGAAGTCGA GATATTGGCAAAAAAAAACGGATTTTAGAGGGCTAAAAGCTGGCTCTGCG AAAAATCTCATTTCCCATAGGATATTATTTTTTGTTGGCTAAAAGTATTC GAGTTTTTTTTTTTTTTTTTCCCCATGGTTATTTGGTGCAAGTATTTGGG TTTTGCACCCATGGTGCTGATGCAAAAATCCGCATTACAAAATTCGTTGT GCTTCTCGAGATTCGGCGAGCGTCTACTAACTATATCCCGTAATAGTATT AATATTGGTGAACAAAACGAGTGGGTGGTCCAGTATTGAAGATCCACCGA ATGTCTCGCAGTTCGAAGAGTTGAGCATGTGGTGACTTATCCCAGGGTTG AATAATTAATTGGTGCTGCCTCGGTGTTGTGTCATTTGACAATTCCACGT GATCGCATTTGCCATTTTCCAGGCCTTATATCTCTACCCCTAGTTTTGCG CTATTCTATTGGTTGGTCGTGCGTATCAGTCTACTTTTGGTTCGCTTATG TCCGGCGTATTGTTTCGATACCTATTTCTTATTTGCGGTCACTGGTGTGG TATGTTGTCCTTAGCAATTGATTCTGGTCCGCCGTTGCTTCTGGTCCTGT GGAAACGAGGTAGAAAATGGTGTCGATTACAACTCTGCTGCTCTTGTCCT CCAAGTTACTCATGGATGATGACTCTCCCGTATACCTTGTCCTCTGAAGT AGTGCCCCCTGCCCCCCCCGCCCGCCCTCGTGATGACCATTTTTTTTTGG CACAATATAATACAAATTGCGGCGGCAGGCATGGGTGGTCTTTGCAGAGA AAAGCATGGCGACCAACGCTCTCCGGCAGATGCAGGGCTTCCCGTTCTTC GAGAAGAAAATGCGGATACAGTTCGCCAAGGTAATACATGATGTGTCATT ATCTTTTTTTTTCTGTCTCTCTGTGTGTGCTCTGATTGCGGGACCGGGCA AGCGATTGAACTTACGTGTGGTTCAACGAAAATATCAGTTTGTTTCACGC ACTGTTGTAGTGAGCAAGGCGTTCTGCGCTGTCGTATGTGACCAAGGGCC AGAGCGCCCCAACAACCAAGACAACACTGTATTCGCCGGTACATCTTAGC CCATGACCTTGGCTATGCGGCGTCTTGAAATTCGTTGTCAAGTCGTGACT CGGACGGTAGGTAGAAGTGTGAGCTCATGTGGGTGCAACATCGTTTGCTT TTTGTTTTTTCTCTCTCTCTCGCTCGCTCGCTCGCTCTTTCTATTTCTCT GTGTCCGTGTGCATGATACGTTTTAAGCTGTAGTACAAAAGCAGCGCCAC GGTCATCACACGCGAATCCCGTCTGTCGCCCCCCGTCCGCATGTTGCCCC CTCCGCGGCACCTCTACCTCCGTCCCAAGACGGAGAGTGACAAAATCACA AAAAGGGCGGGAACGTATGTACCTCGTGACAAGCGGAAATTGCCGCAAGC AGAGACGGGAGCCGTTCCAGGGGTACAGCGCGCAAAGGTCGACAATGGAA CAGCGGTAACGGCGGTGGCGGCAGGGACTACAGGTGTTGTTGCGGCGGCG CAACTGGCGCCGGTTGGACCAATTGGAGACGGTGAGTGGGAGAAATCGGG GGTTAGAGATGTGCGTGTGCATGCACAGCGCGCATAGCCTGTTTGGGGGG GATTTACGCTATTGGGGCTTTTGATGATATTGGTATATTATGTGGGGGTT GCAATACAAGGTAAGAGTGCAGAGGGGAGTGCGTGTTTTGTGTCTTCAGG TCTCCATTTTTGTTGTTGTTATTGTTGTTGTCACGATCCATTTTTGTTTT TGGTGCTGAGAGATGTTTCCCGACAAGGATGCAACATATTTTTTATGAGC TGTGCGCATTTTTTTCTTGTGTAAATTAGGGTGAGCAAGGTAAGGAAAAA CTGCTACAAAACCTTGAAGACCTTATCGTTGTGATTATTCCTGTGCCTGT TATTATTTGTTCTCTGCTAAAACCCAGCCCCTTGATTGGCAGAGAGAAAG TAAGCCCTGGCGCGTAACTCCCTAGGTCGCATCGCCTACCTAATTTTTTT TTTCGTCTCTAAAAGGGGGATAAACAAGCTCGAAACTCGAAACCGTTGGT ACAAGGACCGCGAAAACGCAGTTAAGGCATGGATTACTCTGAAATGTTAC AGATATCATGATCCAATCGTGATCATCGTGTGATGATGGCATCATCCATG TTGAACAAAGCCAAGGGTATGTTTATGGCTGAATTAAAAAAGCGGCTTTT TGTCAGCTTCTTCAAAACGCAAACGAAGTGCTCCAGCAGCAAAGATCTCA GCATGGTTCCTTGAAGACGTGTAAGGTCAAAAGGTTGAAGATGTGCTCGG GCAGACGGTGTCGATCGGTTGCCGCCCCTGGGTTAGCTAGAAGCGATGTT GCTGTCGAGACTGGCGAAAAGCGAAAGTGTGAGCTGAGTGTTGCTTTTTT CATCTTCGTGATTTTTGTCTCTTATCGCGTTATAAACCCCACGTACATTG GCCGAGAATTCAGCTATGAACACAGATCTGGGAGAATGATGTGTAGTTCC AAGTGGATGATCCTTTGAAATACTAATTTTACATGTCGTTTTCCATAATA TAAGTCATGACCTAGTATCGTGCTATGCAGTTGACTTGGGGTGCATGTTT TTATTCTGATGTTGTGTGTGTGTGCTTGATTCCTATGTCGTTTTGTTCTG TCCAGATTCTTCGGATTGAAGCCCGAGTACATACACGCACACAAATTCTA AACAAGCTAACCAACAGCGCGTTCTCTCCCTCCCCCCACCTCCCTCTGTC CTATGGAATCCGTCTTATTCGGATGCAGTGCCGCACAAAATCCTATATGC CACCGGACTACCTCCGGAAATCACGCAGATCATGCTGTCAAAGCTATTCG AGCAGTACCCGGGGTTTGCGGAGGTAAGCACGGGTATCGACCGCGATGTG AATTAATGGATGGGTGGATGGATGGGTGATTTATTGAGAGCTCCGAAATC CAAATATGTCCGGCGTCATGATCGTCCAAATTTGATTGCGCATACTGAAG TGTAAGAGAGGGGTATCATACTGTGCAGACTGAATCGGATTTTTGATCGC TCACAGTACTGTCAGTCATCACTAAGTAGCGACGCGTGACAAAAGTCTCG GTTAGTCGCCATTGTCTCTGCTGCTTTTGTTACCGCTGCTATTCGTATGG AAATTATGAGAAAGTAGCTTGTGATATATATAGATATTTAGTTGCTTGCC GTGGTTTCTGCTGCTGCTACTGCTGTACGACGTCTCGTAAGTATAGAGGC ACTTGAAAATTTCCGATTTTTTGTTTTTAAAATAGAATTCTACGTGTGTT TTGGGTGAAGCAGTTGACTTTTAACAACACAACACGTACCGTGAAAATAA CACGTTGCCGAAAAAAAAGCCTTTTTTTGGGGGGGGGGGCTTTTCCCTCA TCAAACTTTTTGGTGCTAAAATTCAACTTTTTGACAAAAAATAATGGTTT TCAACCCCTAAACATGTAGAATTTCCAATAAATAAGCGAAAAGTTAATCG GAGCTGTTTGAGTGCCTCTATAAGCATTATCGAGTATACCTATGAGATAG AGGAAGTATAGATGTATGTATATGTTGTTCGTCGCGGTGATCTCTGCTGC TGCTGTACGGTATATATATATACTTACGTATATTAATGTATATATACCTG GCCTTATCTATTTATCTGTGAAGTTTGTTTGTGTTGGGTGAGAAGGTGAG TTACTGGCGGTAAAGTTGCGCGCTTGTCTGGTCTGAAGCGTTGCTGTCAT CACAGCTTATGGAAGGAAGCAAGACAAGTAACGCAGAGTCCTCCGCAATG ACGAGAAACGAAAAAGCTGTACGCCACTAGTACGACCAATGACCGTGGGG AAGGTATGATGTTTTTAGAAGCTGTTTGTTGATCAAAGAGTCGTAAAACT GTTCCGATTTAACGCAACATCGCCACCCCCACCTCTATTAAGGAAGCGTG GTATGATTGATGTGTGACTACAGTTTTTTTCCCTTGTTGTCACTTTTTTT TTTTTTGGGGGGGGGGGGCGGGGCGAACGCAGGCTCGAATGGCACCAGGA GGGCAAGCTTTCATCGAATTCGCGGACGAAATGCAGGCGAGTCATGATGT CATAGAATAGTCTTACCCGGCCATGAATACTTTGCAGTAGGCAGGGGGCA TAATGAGGAGGACATCCCTCCCTCGGACAAGTGAAGTGTCATCGATTGAT GTCCCCAATCAAGTGCTGCAGTCGAAACTTGCGACAACACATTGCAGGTT GTTTGGATTCAAATAATAGCTAAAGCCGTGATCTATAATAATAAAACACA TGTCTACGAACTTGGCTTCGCGTCAAACCGCCGAATGGTCCAGTGCGGTA GGTATACAGGCATCGATATCTGTTGGTGTGGTGACATCACCTTGTTTGGC AGAGACTAGCGTGTGGTATAGATATAGTTGTTGCATGTGCGGAACAAGAT AGCCCGACAGGCAATCACAGAAATCCCCTATTATTGAAAAACAAAACAAA TAATAGGGAGAGGAGGGGGTACGTTGTTGGATCCATTGACCATGCGTCTT CGGGATGACGGAGCTTTGTTACCATTCTCATCAAAGCGATTTCCGATAAC CAATCGCTATTTCGTACGTTGGTCGCCAAATTTGGCTCAAAAATGTTTTA CCTACCCTGTCCACCTGAACCATCGCCTATTCGGGGGGGGGGGAGGAGTT AAATAACTTGTAATATATATATATCATGGCCGGAGAAGATACGCGAGCTG CTTCAGTGTATCGACGATGGCCTTACTCCGTGAAAACCTCTCGACCGTGT TCTTGACAAGATCGGAAAATTGAAAGGCGTCGCTCAAGTCAACACCTGTA CTGGTGTGATTGGTGTGTTTTACTGTAGTTCTGCTGTGCTATGCTATGAT ATGCTGTGCTATGCCCCTGAAAAGCGTGTCCCTTGGCCTTTTCGAAGTGG TTAAAAACATGTAAAGTGGTTGAATTACAAGTTAATACTTTCAGGAACCG AAGATGGTAATGATCAGATGATATCTTTCTCGGTGACCAATCGTGGATAA TGACGAATGCTAGTGCTAAATGCTGTGAATCATGTCAACCATCTAGCCAC CTGCACATACCTGTTTGGTAGTTGATGTCCTTTCGAAAACAGAAAAGCCC AAAGGAAAGGAGATCTTGTAGCTAGCTCATTCGAATAGGCGCGGTATGTG GGGCATTCCGTTGTCTCTACCTCGGTGTCTATCTCGTTCTGTGCAATTAA GGCTGATGACCCTTGTGTGTCTCAGTCTAACGGGCGAATATCAAAAGGAA AGGTGACGCTCGAGGCTTTCCAAATAAGCATTCCTGACAAAACAGTCGCA CAATACGAAATATATATTTTTTTAAACGTATTCTTTATTTCGACTCTTTC TAAATTCTTTGTGATCAAACACACCCTTCCACGTTTTTGATGTCATGCTG CGCCATCTTTTGTCACACAGGCTGGCATCGCGCTCGACGCGCTCAATGGC TTCAAGCTCACGAGCACCAACTCGCTTCAATTGGCGTTCGCACGCAAAGC TTAATGCGAACGAGAAAAAAACGGTCTATGGAGTAGTATAATGGCTTTTT TTGTGCGGGAGAGAGACAGACCCCACTTGACGTCCATGTCAAATGGAAAT GGCGGATTGGGAGGTCGAACAGAATGGAGTGAGGGTGGTCAGGTTTAGGG GAGGGGTTGTATCTTGCATGCTAATAGTATGAAGTGTAGTACTATTGTCG TCATTTCAATTTGTTGGTGTCGACAAATACGTTTGCAAGCGCATGAGTGC ACGGGAAAACCAGTTGCAAGTGCTGAGGCGGGGCGCGAGCATTGGTTGGC TGTACGTACTGTAGGACTGTAGGCGGAGGCGCCTTCGCGATGACGTGGGT GCTCATGGCGAGAAATGATAGTAGGGCAGTTGAGGTCTGTTTTTTTCAAT GTTCAGTTGCTGTCTGGCCGCGTTCGTTCGAGTTCGGGCGCGTGAGCGTG TAACATGTGTTTTTTTTCACCTCTAGATGATGACTTTAGCTACTGTTTGA AGCTAACAATGAAAAAAAAGGGAGAGAAGGCACTCGACTACAGTAAGTAG CTCAAGTGCTGCCAGAGAGAGGAGAGAAATGGTGCTCGCAGTTGTCCTAT TAGTCAACTTTATTGAAAGGAGCGATCTGATTAGTCTTCTGTGGGTCAGG CCTAACAAGGGACCCTGGGATAGGCGAAGCATGTCATACGGCCGATCGAT GGGGTACAGAAAAAAATGATAATATGGTTCTCGTGTGGTACACGCATAAA ATACGAAAACGCAATCATGTTATCCGTGTGTATCGTCATCTTATGTGTGT GTGAGTTTATACCTACGACGGTATAGAAACATGGTCTCCTCAGTACTACT TGGTTTTAAAGCGTTTGGGTGGATGGGGCGCTGGTGTGACAGCACATGCA TGGCGCGCAAATTTGAACACGTTGATACAAAGACTGGATTCATTCCGATT CCAGAGAAACTCTGCAGCTCTCTCGGCAGCCCTATTTATATGTTCAAGAC AATGAAAACAAACG
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Coding sequence (CDS) from alignment at H-paniculata_contig2495:378..12641-

>mRNA_H-paniculata_contig2495.6783.1 ID=mRNA_H-paniculata_contig2495.6783.1|Name=mRNA_H-paniculata_contig2495.6783.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1560bp|location=Sequence derived from alignment at H-paniculata_contig2495:378..12641- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGAGACGTTGGTGAGATGAACCACACCATCTACGTGAGCAATCTCAA
TGAGAAGATTAAGAAGGCAGTGCTCAAGAAGTCCTTGCACAGATGGGAGA
CGTTGGTGAGATGAACCACACCATCTACGTGAGCAATCTCAATGAGAAGA
TTAAGAAGGCAGTGCTCAAGAAGTCCTTGCACAGTGTATTCAGTCAGTTC
GGCAAGATCATCGACATCGTGGCATGCCGAGGACTGAAGCTCAAAGGACA
GTGTATTCAGTCAGTTCGGCAAGATCATCGACATCGTGGCATGCCGAGGA
CTGAAGCTCAAAGGACAGGCATGGGTGGTCTTTGCAGAGAAAAGCATGGC
GACCAACGCTCTCCGGCAGATGCAGGGCTTCCCGTTCTTCGAGAAGAAAA
TGCGGATACAGTTCGCCAAGGCATGGGTGGTCTTTGCAGAGAAAAGCATG
GCGACCAACGCTCTCCGGCAGATGCAGGGCTTCCCGTTCTTCGAGAAGAA
AATGCGGATACAGTTCGCCAAGACGGAGAGTGACAAAATCACAAAAAGGG
CGGGAACGTATGTACCTCGTGACAAGCGGAAATTGCCGCAAGCAGAGACG
GGAGCCGTTCCAGGGGTACAGCGCGCAAAGGTCGACAATGGAACAGCGGT
AACGGCGGTGGCGGCAGGGACTACAGGTGTTGTTGCGGCGGCGCAACTGG
CGCCGGTTGGACCAATTGGAGACGACGGAGAGTGACAAAATCACAAAAAG
GGCGGGAACGTATGTACCTCGTGACAAGCGGAAATTGCCGCAAGCAGAGA
CGGGAGCCGTTCCAGGGGTACAGCGCGCAAAGGTCGACAATGGAACAGCG
GTAACGGCGGTGGCGGCAGGGACTACAGGTGTTGTTGCGGCGGCGCAACT
GGCGCCGGTTGGACCAATTGGAGACGCTAACCAACAGCGCGTTCTCTCCC
TCCCCCCACCTCCCTCTGTCCTATGGAATCCGTCTTATTCGGATGCAGTG
CCGCACAAAATCCTATATGCCACCGGACTACCTCCGGAAATCACGCAGAT
CATGCTGTCAAAGCTATTCGAGCAGTACCCGGGGTTTGCGGAGCTAACCA
ACAGCGCGTTCTCTCCCTCCCCCCACCTCCCTCTGTCCTATGGAATCCGT
CTTATTCGGATGCAGTGCCGCACAAAATCCTATATGCCACCGGACTACCT
CCGGAAATCACGCAGATCATGCTGTCAAAGCTATTCGAGCAGTACCCGGG
GTTTGCGGAGGCTCGAATGGCACCAGGAGGGCAAGCTTTCATCGAATTCG
CGGACGAAATGCAGGCGAGTCATGATGCTCGAATGGCACCAGGAGGGCAA
GCTTTCATCGAATTCGCGGACGAAATGCAGGCGAGTCATGATGCTGGCAT
CGCGCTCGACGCGCTCAATGGCTTCAAGCTCACGAGCACCAACTCGCTTC
AATTGGCGTTCGCACGCAAAGCTTAAGCTGGCATCGCGCTCGACGCGCTC
AATGGCTTCAAGCTCACGAGCACCAACTCGCTTCAATTGGCGTTCGCACG
CAAAGCTTAA
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