prot_H-paniculata_contig24937.6780.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24937.6780.1
Unique Nameprot_H-paniculata_contig24937.6780.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length172
Homology
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: D8LFY0_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY0_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 3.890e-103
Identity = 149/172 (86.63%), Postives = 162/172 (94.19%), Query Frame = 0
Query:    1 REYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 172
            +EYI TRIPDGG TTVYRNGDFVDLCRGPHVPYSTMIQAF+S RTSSTNWLGKV NDPLQRVYGV+FPSKD+MKK+ EFQ++AK+RDHRRVGVQQ+LFFFH LSPGSAFFLPHGTRIYNRL EFIR+EYWKRGY+EVTTPNM+NM+LWEQSGHAAHYKD MFRF VEG EFG
Sbjct:  311 KEYINTRIPDGGSTTVYRNGDFVDLCRGPHVPYSTMIQAFNSIRTSSTNWLGKVTNDPLQRVYGVAFPSKDQMKKFNEFQEQAKKRDHRRVGVQQDLFFFHPLSPGSAFFLPHGTRIYNRLMEFIRSEYWKRGYEEVTTPNMYNMDLWEQSGHAAHYKDAMFRFPVEGQEFG 482          
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A835YMV8_9STRA (Threonine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV8_9STRA)

HSP 1 Score: 294 bits (752), Expect = 1.810e-92
Identity = 133/171 (77.78%), Postives = 155/171 (90.64%), Query Frame = 0
Query:    2 EYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 172
            +YI+TRIP+GGCTTVY+NG+F+DLCRGPHVPYSTMIQAF++TR SSTNWLGK DND LQR+YGVSFP K ++KK+ +FQ++AK+RDHRRVG QQELFFFH LSPGSAFFLPHGTRIYNRL +FIR EY +RGY+EVT+PN+FNMELW  SGHA HYKDNMFRF VEG E+G
Sbjct:  283 QYIQTRIPEGGCTTVYKNGEFIDLCRGPHVPYSTMIQAFAATRNSSTNWLGKTDNDTLQRIYGVSFPDKKELKKWQDFQEQAKKRDHRRVGQQQELFFFHPLSPGSAFFLPHGTRIYNRLMDFIRGEYRRRGYEEVTSPNIFNMELWNISGHALHYKDNMFRFDVEGQEYG 453          
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: H6WB86_VAULI (Threonine--tRNA ligase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB86_VAULI)

HSP 1 Score: 284 bits (726), Expect = 1.210e-88
Identity = 126/171 (73.68%), Postives = 153/171 (89.47%), Query Frame = 0
Query:    2 EYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 172
            +YI+T+IPDG CTTVY+NGDF+DLCRGPHVP STMIQAF++T+TS+TNWL K +ND LQRVYGVSFP K ++KK+++FQ++AK RDHRR+G+QQELFFFH LSPGSAFFLPHGTR+YN+L +FIR EY  RGY+EVT+PN+FNMELW  SGHA HYK+NMFRF VEG E+G
Sbjct:  285 QYIQTKIPDGSCTTVYKNGDFIDLCRGPHVPQSTMIQAFAATKTSATNWLAKTENDTLQRVYGVSFPEKSQLKKWIDFQEQAKLRDHRRLGMQQELFFFHPLSPGSAFFLPHGTRVYNKLLDFIRKEYRNRGYEEVTSPNIFNMELWNISGHALHYKENMFRFDVEGQEYG 455          
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A7S2XW11_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW11_9STRA)

HSP 1 Score: 265 bits (677), Expect = 1.660e-82
Identity = 115/169 (68.05%), Postives = 144/169 (85.21%), Query Frame = 0
Query:    4 IETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 172
            I  +IPD G TTVYRNGD +DLCRGPH+P++  I+ F+  R SSTNWLG  DNDPLQRVYG++FPSKD++K++  FQ++AK+RDHRR+G+ Q+LFFFH LSPGSAFF PHGTR+YN+L EFIR+EYWKRGY+EV +PN+FN++LWEQSGHA HY++NMF   VEG EFG
Sbjct:  300 ISNKIPDNGFTTVYRNGDLIDLCRGPHIPHTGKIKGFACARNSSTNWLGSTDNDPLQRVYGIAFPSKDELKQWKVFQEQAKQRDHRRLGLAQDLFFFHQLSPGSAFFHPHGTRVYNKLVEFIRSEYWKRGYEEVISPNVFNLDLWEQSGHAKHYRENMFIMDVEGQEFG 468          
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A812NVH5_SYMMI (Threonine--tRNA ligase (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NVH5_SYMMI)

HSP 1 Score: 255 bits (651), Expect = 5.390e-81
Identity = 112/169 (66.27%), Postives = 141/169 (83.43%), Query Frame = 0
Query:    4 IETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 172
            I  ++PD   TTVY+ G  +DLC GPH+P++  IQAF+ST+TSSTNWLG+V NDPLQRVYGV+FP K  +K+Y+EFQ++AK+RDHR +G +QELFFFH LSPGS F+LPHG R+YN+L EFI+ EYWKRGY+EV TPN+FN++LWE SGHA HYK+NMF F VEG E+G
Sbjct:  203 IRNKVPDDAKTTVYKCGPLIDLCMGPHIPHTGKIQAFASTKTSSTNWLGQVTNDPLQRVYGVAFPDKAMLKQYLEFQEQAKQRDHRNLGTKQELFFFHQLSPGSCFWLPHGARVYNKLMEFIKNEYWKRGYEEVVTPNIFNLQLWEISGHAEHYKENMFVFDVEGQEWG 371          
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A7S3DX10_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DX10_9STRA)

HSP 1 Score: 239 bits (611), Expect = 3.170e-75
Identity = 107/168 (63.69%), Postives = 134/168 (79.76%), Query Frame = 0
Query:    4 IETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEF 171
            + T++PDGG TTVYR GD +DLCRGPHVP +  ++AF++TR S+TNWLG  +ND LQR+YG+SFP K  +K + E Q+KAKERDHRR+  +Q+L  FH LS GSAF+LPHGTRIYN+L EFIRT YW RGY E+ TPN+FN++LW +SGHA HYKD MF F VEG E+
Sbjct:  203 LTTKVPDGGRTTVYRCGDLIDLCRGPHVPNTGKVKAFAATRHSATNWLGDTNNDSLQRMYGISFPDKKMLKAWQENQEKAKERDHRRIAAKQDLIMFHELSAGSAFWLPHGTRIYNKLIEFIRTHYWDRGYDEIITPNIFNLDLWHKSGHAMHYKDAMFCFDVEGQEW 370          
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: W7TCM5_9STRA (Threonine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCM5_9STRA)

HSP 1 Score: 248 bits (634), Expect = 6.610e-75
Identity = 108/169 (63.91%), Postives = 138/169 (81.66%), Query Frame = 0
Query:    4 IETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 172
            I ++IP+GG TTVYRNGD +DLCRGPHVP++  ++AF++ + S  NWLG+ +ND LQRVYG+SFP KD++KK++ FQ++A+E+DHRRVG QQELFFFH LSPGS FFL HG RIY +L +FIR +YW RGY EV +PN+FN++LW  SGHA HYK NMF F +EG EFG
Sbjct:  288 ISSKIPEGGYTTVYRNGDLIDLCRGPHVPHTGRVRAFAAVKNSGANWLGQTENDLLQRVYGISFPDKDRLKKWLAFQEQAREKDHRRVGTQQELFFFHTLSPGSGFFLTHGARIYQKLVDFIRRQYWLRGYTEVISPNIFNLDLWYTSGHAEHYKKNMFVFDIEGQEFG 456          
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A7S1B9N5_9STRA (Threonine--tRNA ligase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9N5_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.980e-74
Identity = 109/169 (64.50%), Postives = 137/169 (81.07%), Query Frame = 0
Query:    4 IETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 172
            I+ ++PDG  T+VY+NGD +DLCRGPHV ++  I+AF +TR S+T WLG V NDPLQR+YG+SFP K +MK++ E Q+KAK RDHRR+G++QELF FH  SPGS FFLPHGTRIYN+L +FI+ +YW RGY EV TPN+FN+ELW QSGHA HY+D MF F VEG E+G
Sbjct:  261 IQAKVPDGTRTSVYKNGDLIDLCRGPHVIHTGKIKAFVATRHSATQWLGNVKNDPLQRLYGISFPDKKQMKEWKENQEKAKARDHRRIGIKQELFMFHDYSPGSCFFLPHGTRIYNKLVDFIKKQYWLRGYDEVITPNVFNLELWNQSGHALHYRDGMFLFDVEGQEWG 429          
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A485LGS8_9STRA (Threonine--tRNA ligase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LGS8_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.690e-73
Identity = 114/170 (67.06%), Postives = 136/170 (80.00%), Query Frame = 0
Query:    2 EYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEF 171
            + I T+IPDGG TT YR G  +DLCRGPHVP++  I+AF+ TRTSST WLGK  ND LQRVYG+SFP   +MK++  FQ++A +RDHRR+G+Q+ELFFFH LSPG  FFLPHG RIY +L EFIR+EY KRGY EV TPN+FNM+LW+ SGHAA YKDNMF F VEG EF
Sbjct:  269 QIISTKIPDGGKTTAYRCGPLIDLCRGPHVPHTGKIKAFAVTRTSSTYWLGKTTNDSLQRVYGISFPDAKQMKEWKHFQEEAAKRDHRRLGIQEELFFFHQLSPGCCFFLPHGARIYFKLLEFIRSEYRKRGYNEVITPNVFNMDLWKTSGHAALYKDNMFVFEVEGQEF 438          
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A067CSB6_SAPPC (Threonine--tRNA ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CSB6_SAPPC)

HSP 1 Score: 241 bits (614), Expect = 2.760e-72
Identity = 110/170 (64.71%), Postives = 135/170 (79.41%), Query Frame = 0
Query:    2 EYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEF 171
            + I T+IPDGG TT YR G  +DLCRGPHVP++  I+AF+ TRTSST WLGK  ND LQRVYG+SFP   +MK++  FQ++A +RDHR++G+Q+EL+FFH LSPG  F+LPHG RIY +L E+IR+EY KRGY EV TPN+FNM+LW  SGHA HYKDNMF F VEG EF
Sbjct:  271 QIISTKIPDGGRTTAYRCGPLIDLCRGPHVPHTGKIKAFAVTRTSSTYWLGKTTNDTLQRVYGISFPDTKQMKEWKHFQEEAAKRDHRKLGLQEELYFFHQLSPGCCFWLPHGARIYMKLLEYIRSEYRKRGYHEVITPNVFNMDLWHTSGHAQHYKDNMFVFNVEGQEF 440          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFY0_ECTSI3.890e-10386.63Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculo... [more]
A0A835YMV8_9STRA1.810e-9277.78Threonine--tRNA ligase n=1 Tax=Tribonema minus Tax... [more]
H6WB86_VAULI1.210e-8873.68Threonine--tRNA ligase n=1 Tax=Vaucheria litorea T... [more]
A0A7S2XW11_9STRA1.660e-8268.05Threonine--tRNA ligase (Fragment) n=1 Tax=Fibrocap... [more]
A0A812NVH5_SYMMI5.390e-8166.27Threonine--tRNA ligase (Fragment) n=1 Tax=Symbiodi... [more]
A0A7S3DX10_9STRA3.170e-7563.69Threonine--tRNA ligase (Fragment) n=1 Tax=Amphipro... [more]
W7TCM5_9STRA6.610e-7563.91Threonine--tRNA ligase n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S1B9N5_9STRA1.980e-7464.50Threonine--tRNA ligase n=1 Tax=Corethron hystrix T... [more]
A0A485LGS8_9STRA1.690e-7367.06Threonine--tRNA ligase n=2 Tax=Aphanomyces TaxID=1... [more]
A0A067CSB6_SAPPC2.760e-7264.71Threonine--tRNA ligase n=3 Tax=Saprolegniaceae Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012947Threonyl/alanyl tRNA synthetase, SADSMARTSM00863tRNA_SAD_4coord: 14..63
e-value: 1.6E-11
score: 54.3
IPR012947Threonyl/alanyl tRNA synthetase, SADPFAMPF07973tRNA_SADcoord: 15..49
e-value: 7.4E-9
score: 35.6
NoneNo IPR availableGENE3D3.30.930.10coord: 69..172
e-value: 2.0E-34
score: 121.1
NoneNo IPR availableGENE3D3.30.980.10coord: 1..67
e-value: 8.7E-18
score: 66.8
NoneNo IPR availablePANTHERPTHR11451:SF46FI05224Pcoord: 2..172
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 63..164
IPR002320Threonine-tRNA ligase, class IIaPANTHERPTHR11451TRNA SYNTHETASE-RELATEDcoord: 2..172
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 71..172
score: 10.12
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilySUPERFAMILY55186ThrRS/AlaRS common domaincoord: 2..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24937contigH-paniculata_contig24937:1026..3472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24937.6780.1mRNA_H-paniculata_contig24937.6780.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24937 1026..3472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24937.6780.1 ID=prot_H-paniculata_contig24937.6780.1|Name=mRNA_H-paniculata_contig24937.6780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp
REYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNW
LGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFF
HHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQ
SGHAAHYKDNMFRFGVEGAEFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012947tRNA_SAD
IPR002320Thr-tRNA-ligase_IIa
IPR006195aa-tRNA-synth_II
IPR018163Thr/Ala-tRNA-synth_IIc_edit