mRNA_H-paniculata_contig24937.6780.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: D8LFY0_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY0_ECTSI) HSP 1 Score: 320 bits (819), Expect = 3.890e-103 Identity = 149/172 (86.63%), Postives = 162/172 (94.19%), Query Frame = 1
Query: 1 REYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 516
+EYI TRIPDGG TTVYRNGDFVDLCRGPHVPYSTMIQAF+S RTSSTNWLGKV NDPLQRVYGV+FPSKD+MKK+ EFQ++AK+RDHRRVGVQQ+LFFFH LSPGSAFFLPHGTRIYNRL EFIR+EYWKRGY+EVTTPNM+NM+LWEQSGHAAHYKD MFRF VEG EFG
Sbjct: 311 KEYINTRIPDGGSTTVYRNGDFVDLCRGPHVPYSTMIQAFNSIRTSSTNWLGKVTNDPLQRVYGVAFPSKDQMKKFNEFQEQAKKRDHRRVGVQQDLFFFHPLSPGSAFFLPHGTRIYNRLMEFIRSEYWKRGYEEVTTPNMYNMDLWEQSGHAAHYKDAMFRFPVEGQEFG 482
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A835YMV8_9STRA (Threonine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV8_9STRA) HSP 1 Score: 294 bits (752), Expect = 1.810e-92 Identity = 133/171 (77.78%), Postives = 155/171 (90.64%), Query Frame = 1
Query: 4 EYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 516
+YI+TRIP+GGCTTVY+NG+F+DLCRGPHVPYSTMIQAF++TR SSTNWLGK DND LQR+YGVSFP K ++KK+ +FQ++AK+RDHRRVG QQELFFFH LSPGSAFFLPHGTRIYNRL +FIR EY +RGY+EVT+PN+FNMELW SGHA HYKDNMFRF VEG E+G
Sbjct: 283 QYIQTRIPEGGCTTVYKNGEFIDLCRGPHVPYSTMIQAFAATRNSSTNWLGKTDNDTLQRIYGVSFPDKKELKKWQDFQEQAKKRDHRRVGQQQELFFFHPLSPGSAFFLPHGTRIYNRLMDFIRGEYRRRGYEEVTSPNIFNMELWNISGHALHYKDNMFRFDVEGQEYG 453
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: H6WB86_VAULI (Threonine--tRNA ligase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB86_VAULI) HSP 1 Score: 284 bits (726), Expect = 1.210e-88 Identity = 126/171 (73.68%), Postives = 153/171 (89.47%), Query Frame = 1
Query: 4 EYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 516
+YI+T+IPDG CTTVY+NGDF+DLCRGPHVP STMIQAF++T+TS+TNWL K +ND LQRVYGVSFP K ++KK+++FQ++AK RDHRR+G+QQELFFFH LSPGSAFFLPHGTR+YN+L +FIR EY RGY+EVT+PN+FNMELW SGHA HYK+NMFRF VEG E+G
Sbjct: 285 QYIQTKIPDGSCTTVYKNGDFIDLCRGPHVPQSTMIQAFAATKTSATNWLAKTENDTLQRVYGVSFPEKSQLKKWIDFQEQAKLRDHRRLGMQQELFFFHPLSPGSAFFLPHGTRVYNKLLDFIRKEYRNRGYEEVTSPNIFNMELWNISGHALHYKENMFRFDVEGQEYG 455
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A7S2XW11_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW11_9STRA) HSP 1 Score: 265 bits (677), Expect = 1.660e-82 Identity = 115/169 (68.05%), Postives = 144/169 (85.21%), Query Frame = 1
Query: 10 IETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 516
I +IPD G TTVYRNGD +DLCRGPH+P++ I+ F+ R SSTNWLG DNDPLQRVYG++FPSKD++K++ FQ++AK+RDHRR+G+ Q+LFFFH LSPGSAFF PHGTR+YN+L EFIR+EYWKRGY+EV +PN+FN++LWEQSGHA HY++NMF VEG EFG
Sbjct: 300 ISNKIPDNGFTTVYRNGDLIDLCRGPHIPHTGKIKGFACARNSSTNWLGSTDNDPLQRVYGIAFPSKDELKQWKVFQEQAKQRDHRRLGLAQDLFFFHQLSPGSAFFHPHGTRVYNKLVEFIRSEYWKRGYEEVISPNVFNLDLWEQSGHAKHYRENMFIMDVEGQEFG 468
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A812NVH5_SYMMI (Threonine--tRNA ligase (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NVH5_SYMMI) HSP 1 Score: 255 bits (651), Expect = 5.390e-81 Identity = 112/169 (66.27%), Postives = 141/169 (83.43%), Query Frame = 1
Query: 10 IETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 516
I ++PD TTVY+ G +DLC GPH+P++ IQAF+ST+TSSTNWLG+V NDPLQRVYGV+FP K +K+Y+EFQ++AK+RDHR +G +QELFFFH LSPGS F+LPHG R+YN+L EFI+ EYWKRGY+EV TPN+FN++LWE SGHA HYK+NMF F VEG E+G
Sbjct: 203 IRNKVPDDAKTTVYKCGPLIDLCMGPHIPHTGKIQAFASTKTSSTNWLGQVTNDPLQRVYGVAFPDKAMLKQYLEFQEQAKQRDHRNLGTKQELFFFHQLSPGSCFWLPHGARVYNKLMEFIKNEYWKRGYEEVVTPNIFNLQLWEISGHAEHYKENMFVFDVEGQEWG 371
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A7S3DX10_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DX10_9STRA) HSP 1 Score: 239 bits (611), Expect = 3.170e-75 Identity = 107/168 (63.69%), Postives = 134/168 (79.76%), Query Frame = 1
Query: 10 IETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEF 513
+ T++PDGG TTVYR GD +DLCRGPHVP + ++AF++TR S+TNWLG +ND LQR+YG+SFP K +K + E Q+KAKERDHRR+ +Q+L FH LS GSAF+LPHGTRIYN+L EFIRT YW RGY E+ TPN+FN++LW +SGHA HYKD MF F VEG E+
Sbjct: 203 LTTKVPDGGRTTVYRCGDLIDLCRGPHVPNTGKVKAFAATRHSATNWLGDTNNDSLQRMYGISFPDKKMLKAWQENQEKAKERDHRRIAAKQDLIMFHELSAGSAFWLPHGTRIYNKLIEFIRTHYWDRGYDEIITPNIFNLDLWHKSGHAMHYKDAMFCFDVEGQEW 370
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: W7TCM5_9STRA (Threonine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCM5_9STRA) HSP 1 Score: 248 bits (634), Expect = 6.610e-75 Identity = 108/169 (63.91%), Postives = 138/169 (81.66%), Query Frame = 1
Query: 10 IETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 516
I ++IP+GG TTVYRNGD +DLCRGPHVP++ ++AF++ + S NWLG+ +ND LQRVYG+SFP KD++KK++ FQ++A+E+DHRRVG QQELFFFH LSPGS FFL HG RIY +L +FIR +YW RGY EV +PN+FN++LW SGHA HYK NMF F +EG EFG
Sbjct: 288 ISSKIPEGGYTTVYRNGDLIDLCRGPHVPHTGRVRAFAAVKNSGANWLGQTENDLLQRVYGISFPDKDRLKKWLAFQEQAREKDHRRVGTQQELFFFHTLSPGSGFFLTHGARIYQKLVDFIRRQYWLRGYTEVISPNIFNLDLWYTSGHAEHYKKNMFVFDIEGQEFG 456
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A7S1B9N5_9STRA (Threonine--tRNA ligase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9N5_9STRA) HSP 1 Score: 246 bits (627), Expect = 1.980e-74 Identity = 109/169 (64.50%), Postives = 137/169 (81.07%), Query Frame = 1
Query: 10 IETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEFG 516
I+ ++PDG T+VY+NGD +DLCRGPHV ++ I+AF +TR S+T WLG V NDPLQR+YG+SFP K +MK++ E Q+KAK RDHRR+G++QELF FH SPGS FFLPHGTRIYN+L +FI+ +YW RGY EV TPN+FN+ELW QSGHA HY+D MF F VEG E+G
Sbjct: 261 IQAKVPDGTRTSVYKNGDLIDLCRGPHVIHTGKIKAFVATRHSATQWLGNVKNDPLQRLYGISFPDKKQMKEWKENQEKAKARDHRRIGIKQELFMFHDYSPGSCFFLPHGTRIYNKLVDFIKKQYWLRGYDEVITPNVFNLELWNQSGHALHYRDGMFLFDVEGQEWG 429
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A485LGS8_9STRA (Threonine--tRNA ligase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LGS8_9STRA) HSP 1 Score: 244 bits (622), Expect = 1.690e-73 Identity = 114/170 (67.06%), Postives = 136/170 (80.00%), Query Frame = 1
Query: 4 EYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEF 513
+ I T+IPDGG TT YR G +DLCRGPHVP++ I+AF+ TRTSST WLGK ND LQRVYG+SFP +MK++ FQ++A +RDHRR+G+Q+ELFFFH LSPG FFLPHG RIY +L EFIR+EY KRGY EV TPN+FNM+LW+ SGHAA YKDNMF F VEG EF
Sbjct: 269 QIISTKIPDGGKTTAYRCGPLIDLCRGPHVPHTGKIKAFAVTRTSSTYWLGKTTNDSLQRVYGISFPDAKQMKEWKHFQEEAAKRDHRRLGIQEELFFFHQLSPGCCFFLPHGARIYFKLLEFIRSEYRKRGYNEVITPNVFNMDLWKTSGHAALYKDNMFVFEVEGQEF 438
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Match: A0A067CSB6_SAPPC (Threonine--tRNA ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CSB6_SAPPC) HSP 1 Score: 241 bits (614), Expect = 2.760e-72 Identity = 110/170 (64.71%), Postives = 135/170 (79.41%), Query Frame = 1
Query: 4 EYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWLGKVDNDPLQRVYGVSFPSKDKMKKYVEFQQKAKERDHRRVGVQQELFFFHHLSPGSAFFLPHGTRIYNRLTEFIRTEYWKRGYQEVTTPNMFNMELWEQSGHAAHYKDNMFRFGVEGAEF 513
+ I T+IPDGG TT YR G +DLCRGPHVP++ I+AF+ TRTSST WLGK ND LQRVYG+SFP +MK++ FQ++A +RDHR++G+Q+EL+FFH LSPG F+LPHG RIY +L E+IR+EY KRGY EV TPN+FNM+LW SGHA HYKDNMF F VEG EF
Sbjct: 271 QIISTKIPDGGRTTAYRCGPLIDLCRGPHVPHTGKIKAFAVTRTSSTYWLGKTTNDTLQRVYGISFPDTKQMKEWKHFQEEAAKRDHRKLGLQEELYFFHQLSPGCCFWLPHGARIYMKLLEYIRSEYRKRGYHEVITPNVFNMDLWHTSGHAQHYKDNMFVFNVEGQEF 440 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24937.6780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24937.6780.1 >prot_H-paniculata_contig24937.6780.1 ID=prot_H-paniculata_contig24937.6780.1|Name=mRNA_H-paniculata_contig24937.6780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp REYIETRIPDGGCTTVYRNGDFVDLCRGPHVPYSTMIQAFSSTRTSSTNWback to top mRNA from alignment at H-paniculata_contig24937:1026..3472- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24937.6780.1 ID=mRNA_H-paniculata_contig24937.6780.1|Name=mRNA_H-paniculata_contig24937.6780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2447bp|location=Sequence derived from alignment at H-paniculata_contig24937:1026..3472- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24937:1026..3472- >mRNA_H-paniculata_contig24937.6780.1 ID=mRNA_H-paniculata_contig24937.6780.1|Name=mRNA_H-paniculata_contig24937.6780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1032bp|location=Sequence derived from alignment at H-paniculata_contig24937:1026..3472- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |