prot_H-paniculata_contig24925.6775.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24925.6775.1
Unique Nameprot_H-paniculata_contig24925.6775.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length337
Homology
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BLAST of mRNA_H-paniculata_contig24925.6775.1 vs. uniprot
Match: A0A6H5K892_9PHAE (APG6 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K892_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 2.180e-40
Identity = 147/340 (43.24%), Postives = 180/340 (52.94%), Query Frame = 0 
Query:   11 GGWTGSGFGNGSFMLESIVQISHAGLSDNVRRESLLHELSKRSPSQPTLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLCCHCYASLLDRIDEDTRLAERDALAYRDFMQLLD-TIADADNDDVTVPPQASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQGGPRPAARGTTEGSVSSTDGENNAKGETVDK--DPAAAAVQIKGDGGSGGRGSLEEGETPV-----------AGGEVLSPLADALWVAHRTSAQLRKELSLVETQREALRQRGSKAWTELAELAHARGVLGDECRELLQDSKLVGRRCVLILE 336
            GGWTGSGFG GS ML+SIVQISHAGLSDNVRRESLL+++S+R   +    A                                               PTLCCHCYASLL++IDED+RLA+R+ALAYRDF++ L   I   DN   +  P A G          XXXXXXXXXXXXXXXXXXXXX +G    AA  T        +     +G ++     PA++A+       S G  +++                 A G   SP A AL +A  TS QLR+EL  +ETQR AL  RGS+AW  L+ELA+ARGVL DECRELLQ S+ V      + E
Sbjct:  171 GGWTGSGFGAGSSMLDSIVQISHAGLSDNVRRESLLYDMSQRPARR--FRAGEQKLPASKDGASAAQVDGGDDERGGRLSQRQPADSEEAEGQEESDDPTLCCHCYASLLEQIDEDSRLADREALAYRDFVETLSGIIISEDNGLESAGPTAPGRRRKAEGFPAXXXXXXXXXXXXXXXXXXXXXGEG----AADSTRREGSDRQEHARKERGRSLSSGTSPASSALAP-----SPGTVNVQXXXXXXXXXXXXXXXGSAAGPAASPFAQALRMAQETSVQLRRELRSLETQRGALCARGSEAWAALSELAYARGVLEDECRELLQASREVAENAAHLSE 499
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24925.6775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K892_9PHAE2.180e-4043.24APG6 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 275..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24925contigH-paniculata_contig24925:1269..3569 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24925.6775.1mRNA_H-paniculata_contig24925.6775.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24925 1269..3569 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24925.6775.1 ID=prot_H-paniculata_contig24925.6775.1|Name=mRNA_H-paniculata_contig24925.6775.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=337bp
MTRSGYGSGLGGWTGSGFGNGSFMLESIVQISHAGLSDNVRRESLLHELS
KRSPSQPTLAAAAAAQEGNTANATESGGGKIDPQEHYGKEQEEEKDDGDD
DDDDDDDDPTLCCHCYASLLDRIDEDTRLAERDALAYRDFMQLLDTIADA
DNDDVTVPPQASGAAPSSRREVTASASAAAAAADVAAAAATVAAEQGGPR
PAARGTTEGSVSSTDGENNAKGETVDKDPAAAAVQIKGDGGSGGRGSLEE
GETPVAGGEVLSPLADALWVAHRTSAQLRKELSLVETQREALRQRGSKAW
TELAELAHARGVLGDECRELLQDSKLVGRRCVLILE*
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