prot_H-paniculata_contig2491.6768.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2491.6768.1
Unique Nameprot_H-paniculata_contig2491.6768.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
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BLAST of mRNA_H-paniculata_contig2491.6768.1 vs. uniprot
Match: A0A835YUT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT1_9STRA)

HSP 1 Score: 191 bits (486), Expect = 8.790e-58
Identity = 98/211 (46.45%), Postives = 131/211 (62.09%), Query Frame = 0 
Query:    5 EAIKYYRGKLRQAPDNPGFHHNIAPLLLAQGDRRSAIYHYRRAFHLNPGDINSKHDLAMVLWGIGKWEATLALLCQVVAVDDHHFQGHLNLAGVYYSKGQYDLAAHHARKATHIRPRDAMAHRSLGQVLDQMGNSQQSLFHRKIAIRRGPGIGRVSHP--QDALTYKKVGVQLLSRASPDKDNGYAFMDAYRALTRKHVELENSERTREIL 213
            E +KY+R KLRQAPDN  +H N+APLL+++G    AI+HYRRA  LNP D +SK+D+ + LW +GKWEA LA   QV          H+N++ VY+ +G    A  HAR+A H+ P DA AHR+L +VLD  G+S  ++ HR+IA+ RGPG      P   D   ++ + VQL      D +  +A MDA RAL  KHV L NSE T EI+
Sbjct:   21 EGLKYFRHKLRQAPDNASYHRNLAPLLVSEGQLTKAIHHYRRAIELNPADCSSKNDIGVCLWQLGKWEAALAAFVQVTRERPDFTAAHVNMSAVYFGRGMLVQALQHARQAVHLAPMDARAHRNLAKVLDATGDSTCAMAHRQIAVLRGPGSRVPPKPVAADIQVHRALAVQLHYHQQGDVEGAHACMDAARALEGKHVVLPNSETTWEIV 231
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BLAST of mRNA_H-paniculata_contig2491.6768.1 vs. uniprot
Match: A0A482RUE0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUE0_9ARCH)

HSP 1 Score: 78.2 bits (191), Expect = 7.230e-14
Identity = 58/212 (27.36%), Postives = 100/212 (47.17%), Query Frame = 0 
Query:    6 AIKYYRGKLRQAPDNPGFHHNIAPLLLAQGDRRSAIYHYRRAFHLNPGDINSKHDLAMVL-WGIGKWEATLALLCQVVAVDDHHFQGHLNLAGVYYSKGQYDLAAHHARKATHIRPRDAMAHRSLGQVLDQMGNSQQSLFHRKIAIR-RGPGIGRVSHPQDALTYKKVGVQLLSRASPDKDNGYAFMDAYRALTRKHVELENSERTREILQK 215
            A +YY+GKL+  P    ++H +  +  A+G+   A ++YR+     P D+++++D A+ L    G+   ++  L + + + +     H N+A +    G    A HHA +A ++ P DAM                    H   +I    PG   V +      Y+   VQL++R    +D   A M A R L  KH+ L+ +ER++EI+QK
Sbjct:    7 AAEYYKGKLQNHPTLSRYNHFMGAISSAKGEVDKADHYYRQTMLNAPTDVSARNDFALHLAHSEGRKHDSIKELKKGLLITNESSLLHKNMAAMQGRIGDLQQAMHHATQARYLAPNDAMNXXXXXXXXXXXXXXXXXXQHNFASIDIEDPGHCNVINTS---AYRNAAVQLVARGGSRRD-ALALMAAARTLEHKHITLDTTERSQEIVQK 214
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BLAST of mRNA_H-paniculata_contig2491.6768.1 vs. uniprot
Match: D7FJK4_ECTSI (TPR repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK4_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 9.730e-8
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0 
Query:  164 DALTYKKVGVQLLSRASPDKDNGYAFMDAYRALTRKHVELENSERTREILQKC 216
            D  TYKK+G QL++    +++N +AF+D YRA+  K VEL  SERT E L KC
Sbjct:  166 DTHTYKKIGAQLVTLGQAERENSHAFVDCYRAMAGKQVELATSERTNECLCKC 218
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2491.6768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835YUT1_9STRA8.790e-5846.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482RUE0_9ARCH7.230e-1427.36Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
D7FJK4_ECTSI9.730e-850.94TPR repeat n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 21..54
e-value: 12.0
score: 14.1
coord: 89..122
e-value: 0.072
score: 22.2
coord: 55..88
e-value: 320.0
score: 1.8
coord: 123..156
e-value: 65.0
score: 7.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 89..122
score: 8.29
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 123..156
score: 5.281
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 21..54
score: 8.29
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 64..218
e-value: 4.4E-17
score: 64.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..63
e-value: 5.1E-10
score: 41.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..155
NoneNo IPR availablePANTHERPTHR44809FAMILY NOT NAMEDcoord: 10..213
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..156
score: 25.598

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2491contigH-paniculata_contig2491:6292..7596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2491.6768.1mRNA_H-paniculata_contig2491.6768.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2491 6292..7596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2491.6768.1 ID=prot_H-paniculata_contig2491.6768.1|Name=mRNA_H-paniculata_contig2491.6768.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MRNGEAIKYYRGKLRQAPDNPGFHHNIAPLLLAQGDRRSAIYHYRRAFHL
NPGDINSKHDLAMVLWGIGKWEATLALLCQVVAVDDHHFQGHLNLAGVYY
SKGQYDLAAHHARKATHIRPRDAMAHRSLGQVLDQMGNSQQSLFHRKIAI
RRGPGIGRVSHPQDALTYKKVGVQLLSRASPDKDNGYAFMDAYRALTRKH
VELENSERTREILQKCLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom