mRNA_H-paniculata_contig24900.6765.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24900.6765.1 vs. uniprot
Match: A0A4R6JL86_9ACTN (Heme peroxidase n=1 Tax=Actinoplanes brasiliensis TaxID=52695 RepID=A0A4R6JL86_9ACTN) HSP 1 Score: 54.7 bits (130), Expect = 1.330e-6 Identity = 34/105 (32.38%), Postives = 54/105 (51.43%), Query Frame = 1
Query: 7 GCSPALTNRRTKFAMNGRDYRRFPSGFAR-------ICDSRNDNNRILSQITVAWMNLHNKFVDD---EGFN----FAQARDATIKEWQAVVLTDLLPNILDEEV 279
G + A+T T +NG D R G + I D RND N +L+Q +A+++ HN+ VD +G F AR+ ++ +Q VVLTD+LP ++ +
Sbjct: 145 GITAAITGAGTDVNLNGYDLPRVTHGETKAERQAPLIADPRNDQNLLLAQTHLAFLHFHNRVVDQLIHDGLRGPALFRAARETVVRHYQWVVLTDVLPRVVQPSI 249
BLAST of mRNA_H-paniculata_contig24900.6765.1 vs. uniprot
Match: A0A4V6MTD2_9RHOB (Peroxidase n=1 Tax=Paracoccus subflavus TaxID=2528244 RepID=A0A4V6MTD2_9RHOB) HSP 1 Score: 52.4 bits (124), Expect = 8.720e-6 Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 94 ICDSRNDNNRILSQITVAWMNLHNKFVDDEGFNFAQARDATIKEWQAVVLTDLLPNILDEEV 279
I D RND N +++Q+ VA++ LHN+FVD G F ARD T +Q +VL D LP I +V
Sbjct: 265 IGDGRNDENLLVAQLHVAFLRLHNRFVD-LGNGFQGARDLTRFHYQWLVLNDFLPTICANDV 325
BLAST of mRNA_H-paniculata_contig24900.6765.1 vs. uniprot
Match: A0A2N4T0L1_9MICC (Uncharacterized protein n=3 Tax=Kocuria TaxID=57493 RepID=A0A2N4T0L1_9MICC) HSP 1 Score: 51.2 bits (121), Expect = 2.210e-5 Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 61 DYRRFPSGFARICDSRNDNNRILSQITVAWMNLHNKFVDDEGFNFAQARDATIKEWQAVVLTDLLPNILDEEV 279
D R G A I D RND N I+ Q+ +A++ LHN+FVD G +F +AR T +Q +++ D LP+++ V
Sbjct: 212 DLPRDAEGRAVIGDHRNDENLIVCQLHLAFLQLHNRFVDS-GASFEEARRLTRWHFQWLIVHDFLPHVVGRSV 283
BLAST of mRNA_H-paniculata_contig24900.6765.1 vs. uniprot
Match: A0A378GZ14_KOCRO (Animal haem peroxidase n=8 Tax=Kocuria TaxID=57493 RepID=A0A378GZ14_KOCRO) HSP 1 Score: 51.2 bits (121), Expect = 2.210e-5 Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 55 GRDYRRFPS------GFARICDSRNDNNRILSQITVAWMNLHNKFVDDEGFNFAQARDATIKEWQAVVLTDLLPNIL 267
GR++ FP G A I D RND N I++Q + ++ LHN+FVD EG F QA+ T +Q +++ D LP ++
Sbjct: 206 GRNHDGFPDLPRNADGTAIIGDHRNDENLIVAQFHLTFLQLHNRFVD-EGMTFQQAQQMTRWHYQWLIVHDFLPRMV 281
BLAST of mRNA_H-paniculata_contig24900.6765.1 vs. uniprot
Match: UPI00131F094D (heme peroxidase family protein n=1 Tax=Planctomonas deserti TaxID=2144185 RepID=UPI00131F094D) HSP 1 Score: 50.4 bits (119), Expect = 4.130e-5 Identity = 28/71 (39.44%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 61 DYRRFPSGFARICDSRNDNNRILSQITVAWMNLHNKFVDDEGFNFAQARDATIKEWQAVVLTDLLPNILDE 273
D R G A I D RND N I++Q+ +A++ LHN+FV+ G +FA+A+ T +Q +++ D LP I+ +
Sbjct: 207 DLPRQADGKAIIGDPRNDENLIVAQLHLAFLQLHNRFVES-GQSFAEAQRLTRWHFQWLIVNDFLPRIVGQ 276
BLAST of mRNA_H-paniculata_contig24900.6765.1 vs. uniprot
Match: UPI0016699051 (heme peroxidase family protein n=1 Tax=Undibacterium terreum TaxID=1224302 RepID=UPI0016699051) HSP 1 Score: 50.4 bits (119), Expect = 4.130e-5 Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 79 SGFARICDSRNDNNRILSQITVAWMNLHNKFVDDEGFNFAQARDATIKE--------WQAVVLTDLLPNILDEEV 279
S A I D RND N I+SQ+ A++ LHN+ VD++ F +DAT +E +Q VVL D LP+I +E+
Sbjct: 180 SARALIGDKRNDENVIVSQLHSAFLQLHNRLVDEDAF-----KDATFEEIQRQVRWHYQYVVLNDFLPHICGKEL 249
BLAST of mRNA_H-paniculata_contig24900.6765.1 vs. uniprot
Match: A0A3A4RCN6_9BURK (Peroxidase n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A3A4RCN6_9BURK) HSP 1 Score: 49.7 bits (117), Expect = 7.670e-5 Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 94 ICDSRNDNNRILSQITVAWMNLHNKFVDDEGFNFAQARDATIKEWQAVVLTDLLPNILD 270
I DSRND N I++Q +A++ LHN FV+ G +F +AR AT+ +Q +++ L + D
Sbjct: 200 IGDSRNDENLIVAQTHLAFLRLHNSFVE-RGMDFTEARQATVFHYQWLIVNSYLDEVCD 257
BLAST of mRNA_H-paniculata_contig24900.6765.1 vs. uniprot
Match: A0A7Y5JUV0_9MICO (Peroxidase n=1 Tax=Dermatophilaceae bacterium TaxID=2728912 RepID=A0A7Y5JUV0_9MICO) HSP 1 Score: 49.3 bits (116), Expect = 9.970e-5 Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 61 DYRRFPSGFARICDSRNDNNRILSQITVAWMNLHNKFVDDEGFNFAQARDATIKEWQAVVLTDLLPNILDE 273
D R +G A + D RND N I+ Q+ +A++ LHN FVD G +FA A+ T +Q +++ D LP I+ +
Sbjct: 34 DLPRTGTGTALLGDPRNDENLIICQMQLAFIRLHNGFVDG-GHSFADAQRLTRWHYQWLIVHDFLPRIVGQ 103 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24900.6765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24900.6765.1 >prot_H-paniculata_contig24900.6765.1 ID=prot_H-paniculata_contig24900.6765.1|Name=mRNA_H-paniculata_contig24900.6765.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp LQGCSPALTNRRTKFAMNGRDYRRFPSGFARICDSRNDNNRILSQITVAWback to top mRNA from alignment at H-paniculata_contig24900:3252..3530+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24900.6765.1 ID=mRNA_H-paniculata_contig24900.6765.1|Name=mRNA_H-paniculata_contig24900.6765.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=279bp|location=Sequence derived from alignment at H-paniculata_contig24900:3252..3530+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24900:3252..3530+ >mRNA_H-paniculata_contig24900.6765.1 ID=mRNA_H-paniculata_contig24900.6765.1|Name=mRNA_H-paniculata_contig24900.6765.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=558bp|location=Sequence derived from alignment at H-paniculata_contig24900:3252..3530+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |