prot_H-paniculata_contig2489.6759.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2489.6759.1
Unique Nameprot_H-paniculata_contig2489.6759.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length318
Homology
BLAST of mRNA_H-paniculata_contig2489.6759.1 vs. uniprot
Match: D7FNT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNT4_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 2.130e-109
Identity = 161/225 (71.56%), Postives = 193/225 (85.78%), Query Frame = 0
Query:   91 QEDGPAATGNLLRTLTGPEFSIALGVSILLAVLTNRLATPELIDSQARTDILGVMASGGLITNGVYLLDLNVKTAEEVTLVGRFLQEYSPSLVPSARRDLQWLAESLLLASPTTTVVVYRGGQALARVGVVGESPVVQDAPILQRCIREGKYGRELYLPALQVLPGKIEFDYLPENCQGVLMQPVLDGSAVVIIGTNRARAFSPKDIAWIKGLCDQAALSLRQAI 315
            ++  P A G+L+R LTGP  S+ +GV ILLAVL NR+ATPEL+DSQARTDILGV+ASGGL+TNGVYLLDL VK AEEVTLVG F+QEY+  L P ARRDLQWL ESLLL SP T+++VY+ G+ LARVGV+GES  ++DAPIL++CI EG+ GRE YL ALQ LPGK+EFDYLPENCQ VLM PVL+GSAVV++GTNRARAF+PKDI W+KGLC+QAALSLR+A+
Sbjct:   67 EQRSPVA-GSLIRALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYADDLAPGARRDLQWLGESLLLVSPATSMLVYQDGKTLARVGVMGESADIRDAPILRKCISEGRDGREQYLAALQTLPGKVEFDYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDIVWMKGLCNQAALSLREAV 290          
BLAST of mRNA_H-paniculata_contig2489.6759.1 vs. uniprot
Match: A0A835YLX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX2_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.260e-66
Identity = 122/230 (53.04%), Postives = 159/230 (69.13%), Query Frame = 0
Query:   90 AQEDGPAA---TGNLLRTLTGPEFSIALGVSILLAVLTNRLA-TPELIDSQARTDILGVMASGGLITNGVYLLDLNVKTAEEVTLVGRFLQEYSPSLVPSARRDLQWLAESLLLASPTT-TVVVYRGGQALARVGVVGESPVVQDA--PILQRCIREG-KYGRELYLPALQVLPGKIEFDYLPENCQGVLMQPVLDGSAVVIIGTNRARAFSPKDIAWIKGLCDQAALSL 311
            A EDG AA   +G ++R LTG  FS+A G+  L A+L NRLA TP L DSQARTDIL ++ASGGLI NGVYLLDL++K A+ VTLVG F QE  P+L       L+WL ESL+LA P T +V+V+  G+  AR GV+G      DA  PI+ + +RE  +  +E+YLP LQ LPGKIEF YLP NCQGV++Q VL G   V++G ++ARA++P+DIAW+K   ++A   L
Sbjct:   73 APEDGGAAAAQSGGIIRQLTGSNFSLAAGLLGLAAILINRLALTPYLYDSQARTDILALIASGGLIMNGVYLLDLDIKVADSVTLVGTFEQELDPTLSAEQAAQLRWLCESLILAKPATASVLVHVDGRTRARYGVMGGGATTVDAGAPIMAKALREAARSDKEVYLPVLQNLPGKIEFTYLPANCQGVVIQGVLGGRGAVVVGASQARAYTPRDIAWMKAASERATALL 302          
BLAST of mRNA_H-paniculata_contig2489.6759.1 vs. uniprot
Match: L8LI26_9CHRO (Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 73106 TaxID=102232 RepID=L8LI26_9CHRO)

HSP 1 Score: 150 bits (379), Expect = 1.050e-40
Identity = 88/213 (41.31%), Postives = 131/213 (61.50%), Query Frame = 0
Query:  101 LLRTLTGPEFSIALGVSILLAVLTNRLATPELIDSQARTDILGVMASGGLITNGVYLLDLNVKTAEEVTLVGRFLQEYSPSLVPSARRDLQWLAESLLLASPTTTVVVYRGGQALARVGVVGESPVVQDAPILQRCIREGKYGRELYLPALQVLPGKIEFDYLPENCQGVLMQPVLDGSAVVIIGTNRARAFSPKDIAWIKGLCDQAALSLRQ 313
            +LR L  P  S  LG ++L   L NRL+T EL +SQAR+D+LGV+ S  LI  G+    +  +  E VTL+G    E  P L  S + +L W +  LL  + T +VV+Y  G+ L R G++G++  V+  PI+ RC++  K    +YL +L++ PG IEFDYLPEN QGV+ QP L    V+I+G N  R+++ +D  WI+G+ D+ A++L Q
Sbjct:    9 ILRLL--PLVSGGLGGALL---LFNRLSTLELTNSQARSDVLGVILSALLILVGLLWQQIQSRNPESVTLIGEEGFELDPQLPDSVKTELAWASHLLLTNTVTRSVVIYYEGRVLLRRGILGKTAQVKPGPIIHRCLKTSK---PVYLVSLKLYPGGIEFDYLPENTQGVICQP-LGKEGVMILGANAPRSYTKQDETWIEGIADKLAITLAQ 212          
BLAST of mRNA_H-paniculata_contig2489.6759.1 vs. uniprot
Match: UPI00034BD926 (cofactor assembly of complex C subunit B n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI00034BD926)

HSP 1 Score: 145 bits (366), Expect = 1.010e-38
Identity = 86/211 (40.76%), Postives = 129/211 (61.14%), Query Frame = 0
Query:  101 LLRTLTGPEFSIALGVSILLAVLTNRLATPELIDSQARTDILGVMASGGLITNGVYLLDLNVKTAEEVTLVGRFLQEYSPSLVPSARRDLQWLAESLLLASPTTTVVVYRGGQALARVGVVGESPVVQDAPILQRCIREGKYGRELYLPALQVLPGKIEFDYLPENCQGVLMQPVLDGSAVVIIGTNRARAFSPKDIAWIKGLCDQAALSL 311
            +LR L  P F+  LG  +L   L NRL T +L DSQAR+D LG++    LI  G+    +  +T + VTLVG    E++P L   A+ +L W ++ LL  + T ++VVY   Q + R GV+GE+  V+   I+QR I + K    +YL  L + PGK+EFDYLPEN QG++ QP+ D   V+I+G N  R+++ +D  WI+G+ D+ A++L
Sbjct:    9 ILRLL--PIFAGGLGGLLL---LINRLLTIQLTDSQARSDALGIIEGAVLILVGLLWQQIQARTPDTVTLVGETGLEFAPELSEVAKTELAWASQLLLTNTVTRSLVVYYDDQTILRRGVLGENSQVKPGAIVQRVISKNK---PVYLVNLNLYPGKVEFDYLPENTQGLICQPIGD-RGVLILGANAPRSYTKQDEKWIEGIADKLAVTL 210          
BLAST of mRNA_H-paniculata_contig2489.6759.1 vs. uniprot
Match: U7QFZ0_9CYAN (Uncharacterized protein n=2 Tax=Lyngbya TaxID=28073 RepID=U7QFZ0_9CYAN)

HSP 1 Score: 144 bits (363), Expect = 2.890e-38
Identity = 78/194 (40.21%), Postives = 118/194 (60.82%), Query Frame = 0
Query:  122 VLTNRLATPELIDSQARTDILGVMASGGLITNGVYLLDLNVKTAEEVTLVGRFLQEYSPSLVPSARRDLQWLAESLLLASPTTTVVVYRGGQALARVGVVGESPVVQDAPILQRCIREGKYGRELYLPALQVLPGKIEFDYLPENCQGVLMQPVLDGSAVVIIGTNRARAFSPKDIAWIKGLCDQAALSLRQAI 315
            +L NR+ TP+++ SQAR+D LGV+ S  LI  G+    +  K  + V L+G    E+ P L    + +L W    LL  + T +VVVY  GQ L R GV+G++P VQ   I+QR ++  K    +YL  L + PG+IEFDYLPEN QGV+ QP+ D   V+I+G N  R+++ +D  W++G+ D+   +L Q++
Sbjct:   25 LLVNRILTPQILASQARSDALGVILSAVLILTGLLWQQVQPKPPDTVDLIGETGFEFQPDLSDVVKTELAWATHLLLTNTVTRSVVVYYQGQVLLRRGVLGKNPQVQPGAIVQRVLKTQK---PIYLVKLDLYPGRIEFDYLPENTQGVICQPLGD-QGVLILGANAPRSYTQQDENWVEGIADKLENTLGQSL 214          
BLAST of mRNA_H-paniculata_contig2489.6759.1 vs. uniprot
Match: A0A2T1C0K6_9CYAN (Cofactor assembly of complex C subunit B n=1 Tax=Merismopedia glauca CCAP 1448/3 TaxID=1296344 RepID=A0A2T1C0K6_9CYAN)

HSP 1 Score: 144 bits (363), Expect = 2.890e-38
Identity = 82/209 (39.23%), Postives = 124/209 (59.33%), Query Frame = 0
Query:  103 RTLTGPEFSIALGVSILLAVLTNRLATPELIDSQARTDILGVMASGGLITNGVYLLDLNVKTAEEVTLVGRFLQEYSPSLVPSARRDLQWLAESLLLASPTTTVVVYRGGQALARVGVVGESPVVQDAPILQRCIREGKYGRELYLPALQVLPGKIEFDYLPENCQGVLMQPVLDGSAVVIIGTNRARAFSPKDIAWIKGLCDQAALSL 311
            +T       I  G+   L ++ NRL TPEL DSQAR+D+LGV+ SG L+ +G+       ++ E V L+G+   E +P L  + + +L W +  LL  + T +VVV+  GQ + R GV+GE   V    I++R ++  K    +YL  L+V PG+IEFDYLPEN QG + QP L    V+I+G    R+++ +D AWI+G+ D+ A +L
Sbjct:    5 QTTVWRHLPIVAGILGSLLLIVNRLFTPELTDSQARSDVLGVILSGVLVLSGLLWQQYTPRSPEAVELIGQQGLELAPELPETLKNELAWASHLLLTNTVTRSVVVWYQGQTILRRGVLGEKDRVTPGAIVERVLKTQK---PVYLVDLKVYPGRIEFDYLPENTQGAICQP-LGNKGVLILGAYAPRSYTKQDEAWIEGIADKLADTL 209          
BLAST of mRNA_H-paniculata_contig2489.6759.1 vs. uniprot
Match: A0A1Z4RSL5_9CHRO (Uncharacterized protein n=1 Tax=Chondrocystis sp. NIES-4102 TaxID=2005460 RepID=A0A1Z4RSL5_9CHRO)

HSP 1 Score: 144 bits (362), Expect = 4.070e-38
Identity = 89/216 (41.20%), Postives = 132/216 (61.11%), Query Frame = 0
Query:   98 TGNLLRTLTGPEFSIALGVSILLAVLTNRLATPELIDSQARTDILGVMASGGLITNGVYLLDLNVKTAEEVTLVGRFLQEYSPSLVPSARRDLQWLAESLLLASPTTTVVVYRGGQALARVGVVGESPVVQDAPILQRCIREGKYGRELYLPALQVLPGKIEFDYLPENCQGVLMQPVLDGS-AVVIIGTNRARAFSPKDIAWIKGLCDQAALSLR 312
            T  +LR L  P F  A GVS LL +L NRL T +L DSQAR+D LGV+    LI  G+    +  K  + VTL+G    E    L  +A+ +L W +  L+  + T ++VVY  G+ + R GV+G++  V+   I+QR + +GK    +YL  L + PGK+EFDYLPEN QGV+ QP+  GS  V+I+G N  R+++ +D  WI+G+ D+ A++L+
Sbjct:    6 TNRILRLL--PFF--AGGVSGLL-LLVNRLLTTQLTDSQARSDALGVIEGAVLILVGLLWQQIQAKPPDTVTLIGETGLELDSELPQTAKLELAWASHLLITNTVTRSLVVYYAGKTILRRGVLGKNSQVKPGAIVQRVLTQGK---PVYLVNLNLYPGKVEFDYLPENTQGVICQPI--GSLGVLILGANAPRSYTKQDEVWIEGIADKLAVTLK 211          
BLAST of mRNA_H-paniculata_contig2489.6759.1 vs. uniprot
Match: A0A1J1LJ45_9CYAN (Uncharacterized protein n=5 Tax=Planktothrix TaxID=54304 RepID=A0A1J1LJ45_9CYAN)

HSP 1 Score: 144 bits (363), Expect = 4.150e-38
Identity = 84/204 (41.18%), Postives = 122/204 (59.80%), Query Frame = 0
Query:  108 PEFSIALGVSILLAVLTNRLATPELIDSQARTDILGVMASGGLITNGVYLLDLNVKTAEEVTLVGRFLQEYSPSLVPSARRDLQWLAESLLLASPTTTVVVYRGGQALARVGVVGESPVVQDAPILQRCIREGKYGRELYLPALQVLPGKIEFDYLPENCQGVLMQPVLDGSAVVIIGTNRARAFSPKDIAWIKGLCDQAALSL 311
            P F+ +LG  +L   L NR+ TPEL+DSQAR+D LGV+ S  LI  G+    +  ++ + V L+G    E    L    + +L W +  LL  + T +VVVY  G+ L R GV+G +P V   PILQR + + K    +YL  L + PG+IEFDYLPEN QGV+ QP L    V+I+G N  R+++ +D  W++G+ D+ A +L
Sbjct:   23 PIFAGSLGGVLL---LINRVLTPELLDSQARSDALGVILSAVLILTGLLWQQIQPRSPDAVELIGEQGFELKQDLPEFVKTELAWASHLLLTNTVTRSVVVYYQGEVLLRRGVLGNNPTVNPGPILQRVLEKQK---PVYLVNLALYPGRIEFDYLPENTQGVICQP-LGNQGVLILGANAPRSYTKQDENWVEGIGDKLANTL 219          
BLAST of mRNA_H-paniculata_contig2489.6759.1 vs. uniprot
Match: A0A073CGH1_PLAAG (Uncharacterized protein n=12 Tax=Oscillatoriales TaxID=1150 RepID=A0A073CGH1_PLAAG)

HSP 1 Score: 144 bits (362), Expect = 4.550e-38
Identity = 88/211 (41.71%), Postives = 126/211 (59.72%), Query Frame = 0
Query:  101 LLRTLTGPEFSIALGVSILLAVLTNRLATPELIDSQARTDILGVMASGGLITNGVYLLDLNVKTAEEVTLVGRFLQEYSPSLVPSARRDLQWLAESLLLASPTTTVVVYRGGQALARVGVVGESPVVQDAPILQRCIREGKYGRELYLPALQVLPGKIEFDYLPENCQGVLMQPVLDGSAVVIIGTNRARAFSPKDIAWIKGLCDQAALSL 311
            +LR L  P F+ +LG  +L   L NRL TPEL +SQAR+D LGV+ S  LI  G+    +  K+ + V L+G    E  P+L    + +L W +  LL  + T ++VVY  G+ L R GV+G +P V+  PILQR I + K    +YL  L + PG+IEFDYLPEN QGV+ QP L    V+I+G N  R+++ +D  W+ G+ D+   +L
Sbjct:    9 ILRLL--PIFAGSLGGVLL---LINRLLTPELFNSQARSDALGVILSAVLILTGLLWQQIQPKSPDAVDLIGEQGFELKPNLPELIQAELAWASHLLLTNTVTRSIVVYYQGEVLLRRGVLGNNPDVKPGPILQRVIDKQK---PIYLVNLALYPGRIEFDYLPENTQGVICQP-LGNYGVLILGANAPRSYTQQDENWVAGIGDKLTYTL 210          
BLAST of mRNA_H-paniculata_contig2489.6759.1 vs. uniprot
Match: A0A0F5YBK2_9CYAN (Uncharacterized protein n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0F5YBK2_9CYAN)

HSP 1 Score: 143 bits (360), Expect = 7.610e-38
Identity = 79/192 (41.15%), Postives = 116/192 (60.42%), Query Frame = 0
Query:  122 VLTNRLATPELIDSQARTDILGVMASGGLITNGVYLLDLNVKTAEEVTLVGRFLQEYSPSLVPSARRDLQWLAESLLLASPTTTVVVYRGGQALARVGVVGESPVVQDAPILQRCIREGKYGRELYLPALQVLPGKIEFDYLPENCQGVLMQPVLDGSAVVIIGTNRARAFSPKDIAWIKGLCDQAALSLRQ 313
            +L NR  TPE++DSQAR+D LGV+ S  LI  G+    +  K+ + VTL+G    +    L    + +L W +  LL  + T +VVV+   Q L R GV+G++P VQ  PILQR + + K    +YL  L + PG+IEFDYLPEN QGV+ QP L    V+I+G N  R+++ +D  W++G+ D+   +L Q
Sbjct:   25 LLINRTLTPEILDSQARSDALGVILSAVLILTGLLWQQVQPKSPDAVTLIGETGFDLKSDLPDEVKTELAWASHLLLTNTVTRSVVVFYQNQVLLRRGVLGKNPQVQPGPILQRVLDKQK---PVYLVNLALYPGRIEFDYLPENTQGVICQP-LGNRGVLILGANAPRSYTQQDEKWVEGIADKLENTLSQ 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2489.6759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNT4_ECTSI2.130e-10971.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLX2_9STRA1.260e-6653.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L8LI26_9CHRO1.050e-4041.31Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC... [more]
UPI00034BD9261.010e-3840.76cofactor assembly of complex C subunit B n=1 Tax=P... [more]
U7QFZ0_9CYAN2.890e-3840.21Uncharacterized protein n=2 Tax=Lyngbya TaxID=2807... [more]
A0A2T1C0K6_9CYAN2.890e-3839.23Cofactor assembly of complex C subunit B n=1 Tax=M... [more]
A0A1Z4RSL5_9CHRO4.070e-3841.20Uncharacterized protein n=1 Tax=Chondrocystis sp. ... [more]
A0A1J1LJ45_9CYAN4.150e-3841.18Uncharacterized protein n=5 Tax=Planktothrix TaxID... [more]
A0A073CGH1_PLAAG4.550e-3841.71Uncharacterized protein n=12 Tax=Oscillatoriales T... [more]
A0A0F5YBK2_9CYAN7.610e-3841.15Uncharacterized protein n=1 Tax=Limnoraphis robust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021325Cofactor assembly of complex C subunit B, CCB2/CCB4PFAMPF11152CCB2_CCB4coord: 111..305
e-value: 1.7E-51
score: 174.4
NoneNo IPR availablePANTHERPTHR34943FAMILY NOT NAMEDcoord: 112..315
NoneNo IPR availablePANTHERPTHR34943:SF1coord: 112..315
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..317
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.749

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2489contigH-paniculata_contig2489:8961..12351 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2489.6759.1mRNA_H-paniculata_contig2489.6759.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2489 8234..12455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2489.6759.1 ID=prot_H-paniculata_contig2489.6759.1|Name=mRNA_H-paniculata_contig2489.6759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=318bp
MVSSRRTTTSWVLCVATLAQHVLAFNLQFQSSSVIVGGIWDLRQHQRSPP
RCRSHHALSSFYTRQKLPCSSRRNYWRQEAASTNNNEKNAQEDGPAATGN
LLRTLTGPEFSIALGVSILLAVLTNRLATPELIDSQARTDILGVMASGGL
ITNGVYLLDLNVKTAEEVTLVGRFLQEYSPSLVPSARRDLQWLAESLLLA
SPTTTVVVYRGGQALARVGVVGESPVVQDAPILQRCIREGKYGRELYLPA
LQVLPGKIEFDYLPENCQGVLMQPVLDGSAVVIIGTNRARAFSPKDIAWI
KGLCDQAALSLRQAIAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021325CCB2/CCB4