mRNA_H-paniculata_contig24857.6751.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig24857.6751.1
Unique NamemRNA_H-paniculata_contig24857.6751.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig24857.6751.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 8.770e-62
Identity = 109/266 (40.98%), Postives = 162/266 (60.90%), Query Frame = 1 
Query:    1 QYGVAVSGGAELMGLRVKAHHQSGHWLITLDCTNTFNSVKRAAILEEVAIRTPGLTLFVAKCYGEKPADQIFQMDTGERRRISSSTGIHQGYGLGLALFYMPEGPLLRRCGEQCEGLGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARVGVQINNANTKAVPPMNHIPTERETAAVAAIGISVAEGSAVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELYDQACTLTD 798
            Q+GVAV+GG E + +  +  HQ+GHW++  DC+N FN+ KR AI+ + A   P L  ++A+CY E  A  I+ MD+GERR I   +G+ QG G+G  LF+    P++ +   + + LGV L AY+DD+ L    +T EN++ I  LV EL  VG+ +N   + A+PP  H  T  E   +   G+ +AE    VVG PIGTDA+V+  A+ V+ E GA+ LAR+L HMPDKQ A L+ ++S   ++  +ER ++ +L   AC   D
Sbjct:   69 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVLTEGGADKLARMLVHMPDKQVAHLVTSQSLTQRSGNIERGINHKLVRGACKRLD 334
[Close]
BLAST of mRNA_H-paniculata_contig24857.6751.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 1.380e-59
Identity = 108/263 (41.06%), Postives = 162/263 (61.60%), Query Frame = 1 
Query:    1 QYGVAVSGGAELMGLRVKAHHQSGHWLITLDCTNTFNSVKRAAILEEVAIRTPGLTLFVAKCYGEKPADQIFQMDTGERRRISSSTGIHQGYGLGLALFYMPEGPLLRRCGEQCEGLGVELLAYLDDLV-LAMGELTGENLRAIHFLVQELARVGVQINNANTKAVPPMNHIPTERETAAVAAIGISVAEGSAVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELYDQAC 786
            Q+GVAV+GG E + +  +  HQ+GHW++  DC+N FN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+GERR I   +G+ QG G+G  LF     P++ +   + + LGV L AY+DD++ L    +T EN++ I  LV EL  VG+ +N   + A+PP  H  T  E   +   G+ +AE    VVG PIGTDA+V+  A+ V+ E GA+ LAR+L  MPDKQ A L+ ++S   ++ ++ER ++ +L   AC
Sbjct:  112 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVRGAC 374
[Close]
BLAST of mRNA_H-paniculata_contig24857.6751.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 4.390e-59
Identity = 109/266 (40.98%), Postives = 162/266 (60.90%), Query Frame = 1 
Query:    1 QYGVAVSGGAELMGLRVKAHHQSGHWLITLDCTNTFNSVKRAAILEEVAIRTPGLTLFVAKCYGEKPADQIFQMDTGERRRISSSTGIHQGYGLGLALFYMPEGPLLRRCGEQCEGLGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARVGVQINNANTKAVPPMNHIPTERETAAVAAIGISVAEGSAVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELYDQACTLTD 798
            Q+GVAV+GG E + +  +  HQ+GHW++  DC+N FN+ KR AI+ + +   P L  ++A+CY E PA  I+ MD+GERR I   +G+ QG G+G  LF     P++ +   + + LGV L AY+DD+ L   ++T EN++    LV EL  VG+ +N   + A+PP  H  T  E   +   G+ +AE    VVG PIGTDA+V+  A+ V+ E GAE LARLL  MPDKQ A L+ ++S   ++ ++ER ++ +L   AC   D
Sbjct:  480 QFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGAEKLARLLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLD 745
[Close]
BLAST of mRNA_H-paniculata_contig24857.6751.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 3.530e-58
Identity = 107/266 (40.23%), Postives = 160/266 (60.15%), Query Frame = 1 
Query:    1 QYGVAVSGGAELMGLRVKAHHQSGHWLITLDCTNTFNSVKRAAILEEVAIRTPGLTLFVAKCYGEKPADQIFQMDTGERRRISSSTGIHQGYGLGLALFYMPEGPLLRRCGEQCEGLGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARVGVQINNANTKAVPPMNHIPTERETAAVAAIGISVAEGSAVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELYDQACTLTD 798
            Q+G AV GG E + +  +  HQ+GHW++  DC+N FN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+GERR I   +G+ QG G+G  LF     P++ +   + + LGV L AY+DD+ L    +T EN++ I  +V EL  VG+ +N   + A+PP  H  T  E   +   G+ +AE    VVG PIGTDA+V+  A+ V+ E GA+ LAR+L  MPDKQ A L+ ++S   ++ ++ER ++ +L   AC   D
Sbjct:   28 QFGAAVVGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLD 293
[Close]
BLAST of mRNA_H-paniculata_contig24857.6751.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 4.100e-58
Identity = 109/266 (40.98%), Postives = 162/266 (60.90%), Query Frame = 1 
Query:    1 QYGVAVSGGAELMGLRVKAHHQSGHWLITLDCTNTFNSVKRAAILEEVAIRTPGLTLFVAKCYGEKPADQIFQMDTGERRRISSSTGIHQGYGLGLALFYMPEGPLLRRCGEQCEGLGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARVGVQINNANTKAVPPMNHIPTERETAAVAAIGISVAEGSAVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELYDQACTLTD 798
            Q+GVAV+GG E + +  +  HQ+GHW++  DC+N FN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+GERR I   +G+ QG G+G  LF     P++ +   + + LGV L AY+DD+ L    +T EN++ I  LV EL  VG+ +N   + A+PP  H  T  E   +   G+ +AE    VVG PIGTDA+V+  A+ V+ E GA+ LAR+L  MPDKQ A L+ ++S   ++ ++ER ++ +L   AC   D
Sbjct:  481 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVRGACKRLD 746
[Close]
BLAST of mRNA_H-paniculata_contig24857.6751.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 3.990e-56
Identity = 107/266 (40.23%), Postives = 159/266 (59.77%), Query Frame = 1 
Query:    1 QYGVAVSGGAELMGLRVKAHHQSGHWLITLDCTNTFNSVKRAAILEEVAIRTPGLTLFVAKCYGEKPADQIFQMDTGERRRISSSTGIHQGYGLGLALFYMPEGPLLRRCGEQCEGLGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARVGVQINNANTKAVPPMNHIPTERETAAVAAIGISVAEGSAVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELYDQACTLTD 798
            Q+GVAV+GG E + +  +  HQ+GHW++  DC+N FN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+GERR I   +G+ QG G+G  LF     P++ +   + + LGV L AY+DD+ L    +T EN++ I  LV EL  VG+ +N   + A+ P        E   +   G+ +AE    VVG PIGTDA+V+  A+ V+ E GA+ LAR+L  MPDKQ A L+ ++S   ++ +LER ++ +L   AC   D
Sbjct:  502 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAIKVIAEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYLERGINHKLVRGACERLD 767
[Close]
BLAST of mRNA_H-paniculata_contig24857.6751.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.820e-53
Identity = 97/230 (42.17%), Postives = 139/230 (60.43%), Query Frame = 1 
Query:    1 QYGVAVSGGAELMGLRVKAHHQSGHWLITLDCTNTFNSVKRAAILEEVAIRTPGLTLFVAKCYGEKPADQIFQMDTGERRRISSSTGIHQGYGLGLALFYMPEGPLLRRCGEQCEGLGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARVGVQINNANTKAVPPMNHIPTERETAAVAAIGISVAEGSAVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLAHMPD 690
            Q+GVAV+GG E + +  +  HQ+GHW++  DC+N FN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+G RR I    G+ QG G+G  LF     P++ +   + + LGV L AY+DD+ L    +T EN++ I  LV EL  VG+ +N   + A+PP  H  T  E   +   G+ +AE    VVG PIGTDA+V+  A+ V+ E GA+ LAR+L  MPD
Sbjct:  203 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPD 432
[Close]
BLAST of mRNA_H-paniculata_contig24857.6751.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 3.880e-50
Identity = 99/250 (39.60%), Postives = 146/250 (58.40%), Query Frame = 1 
Query:   49 VKAHHQSGHWLITLDCTNTFNSVKRAAILEEVAIRTPGLTLFVAKCYGEKPADQIFQMDTGERRRISSSTGIHQGYGLGLALFYMPEGPLLRRCGEQCEGLGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARVGVQINNANTKAVPPMNHIPTERETAAVAAIGISVAEGSAVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELYDQACTLTD 798
            V+   Q+GHW++  DC+N FN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+GERR I   +G+ QG G+G  LF     P++ +   + + LGV L AY+DD+ L    +T E ++ I  LV EL  VG+ +N   + A+PP  H  T  E   +   G+ +AE    VVG PI TDA+V+  A+ V+ E GA+ LAR+L  MPDKQ A L+ ++S   ++  +ER ++ EL    C   D
Sbjct:  523 VQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIETDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGCIERGINHELVRGVCERPD 772
[Close]
BLAST of mRNA_H-paniculata_contig24857.6751.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 9.350e-49
Identity = 96/243 (39.51%), Postives = 143/243 (58.85%), Query Frame = 1 
Query:   70 GHWLITLDCTNTFNSVKRAAILEEVAIRTPGLTLFVAKCYGEKPADQIFQMDTGERRRISSSTGIHQGYGLGLALFYMPEGPLLRRCGEQCEGLGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARVGVQINNANTKAVPPMNHIPTERETAAVAAIGISVAEGSAVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELYDQACTLTD 798
            G W++  DC+N FN+ KR AI+ + A   P L  ++A+CY E PA  I+ MD+GERR I   +G+ QG G+G  LF     P++ +   + + LGV L AY+DD+ L    +T EN++ I  LV EL  VG+ +N   + A+PP  H  T  E   +   G+ +AE    VVG PIGTDA+V+  A+ V+ E GA+ LAR++  MPDKQ A L+ ++    ++  +ER ++ +L   AC   D
Sbjct:  143 GQWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMVVRMPDKQVAHLVTSQLLTQRSGNIERGINHKLVRGACERLD 385
[Close]
BLAST of mRNA_H-paniculata_contig24857.6751.1 vs. uniprot
Match: A0A6H5J7C4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7C4_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.810e-34
Identity = 75/193 (38.86%), Postives = 113/193 (58.55%), Query Frame = 1 
Query:  220 MDTGERRRISSSTGIHQGYGLGLALFYMPEGPLLRRCGEQCEGLGVELLAYLDDLVLAMGELTGENLRAIHFLVQELARVGVQINNANTKAVPPMNHIPTERETAAVAAIGISVAEGSAVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLAHMPDKQAAMLIATKSRALKTCFLERVMDAELYDQACTLTD 798
            MD+GERR I   +G+ QG G+G  LF     P++ +   + + LGV L +Y+DD+ L    +T EN++ I  LV EL  VG+ +N   + A+PP  H  T  E   +   G+ +AE    VVG PIG DA+V+  A+ V+ E GA+ LAR+L  MPDKQ A L+ ++S   ++ ++ER ++ +L   AC   D
Sbjct:    1 MDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKSYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGKDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLD 193
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24857.6751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDD0_9PHAE8.770e-6240.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE1.380e-5941.06Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KKQ2_9PHAE4.390e-5940.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYJ9_9PHAE3.530e-5840.23Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE4.100e-5840.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE3.990e-5640.23Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE1.820e-5342.17Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KJC0_9PHAE3.880e-5039.60Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JLG6_9PHAE9.350e-4939.51Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J7C4_9PHAE2.810e-3438.86Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24857contigH-paniculata_contig24857:174..971 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score63.2
Seed ortholog evalue2.2e-07
Seed eggNOG ortholog400682.PAC_15719669
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs39QPF@33154,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Exons1
Model size798
Cds size798
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929726.4211612-CDS-H-paniculata_contig24857:173..9711622929726.4211612-CDS-H-paniculata_contig24857:173..971Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24857 174..971 -
1691480984.4621012-CDS-H-paniculata_contig24857:173..9711691480984.4621012-CDS-H-paniculata_contig24857:173..971Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24857 174..971 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24857.6751.1prot_H-paniculata_contig24857.6751.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig24857 174..971 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig24857.6751.1

>prot_H-paniculata_contig24857.6751.1 ID=prot_H-paniculata_contig24857.6751.1|Name=mRNA_H-paniculata_contig24857.6751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=266bp
QYGVAVSGGAELMGLRVKAHHQSGHWLITLDCTNTFNSVKRAAILEEVAI
RTPGLTLFVAKCYGEKPADQIFQMDTGERRRISSSTGIHQGYGLGLALFY
MPEGPLLRRCGEQCEGLGVELLAYLDDLVLAMGELTGENLRAIHFLVQEL
ARVGVQINNANTKAVPPMNHIPTERETAAVAAIGISVAEGSAVVVGTPIG
TDAFVQQHAVTVVKEKGAEHLARLLAHMPDKQAAMLIATKSRALKTCFLE
RVMDAELYDQACTLTD
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mRNA from alignment at H-paniculata_contig24857:174..971-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig24857.6751.1 ID=mRNA_H-paniculata_contig24857.6751.1|Name=mRNA_H-paniculata_contig24857.6751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=798bp|location=Sequence derived from alignment at H-paniculata_contig24857:174..971- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTACGGGGTAGCGGTCTCGGGCGGCGCGGAGCTCATGGGCCTCCGCGT
GAAAGCACACCACCAATCGGGGCATTGGCTTATCACCCTCGACTGTACCA
ATACCTTCAACTCTGTCAAGCGGGCGGCGATCTTGGAAGAAGTGGCAATC
CGCACCCCGGGACTGACACTCTTCGTTGCCAAATGCTACGGAGAGAAGCC
GGCAGATCAAATTTTCCAGATGGACACCGGCGAACGCAGGAGAATCTCCT
CGAGCACGGGAATCCACCAGGGTTACGGACTGGGACTCGCCCTTTTCTAC
ATGCCCGAGGGACCGCTCTTGCGCAGGTGCGGAGAACAATGCGAGGGTCT
GGGGGTGGAGCTATTGGCCTACCTAGACGATCTGGTGCTAGCAATGGGGG
AGCTGACGGGAGAAAACTTACGGGCAATACATTTCCTCGTGCAAGAGCTA
GCACGCGTAGGAGTGCAGATTAACAACGCCAACACGAAGGCGGTGCCCCC
AATGAACCATATCCCGACCGAAAGAGAGACTGCTGCGGTGGCGGCGATAG
GCATCAGCGTTGCAGAGGGAAGTGCTGTGGTGGTGGGTACACCGATTGGG
ACCGACGCATTCGTTCAGCAGCACGCCGTCACGGTAGTCAAGGAAAAGGG
GGCGGAGCACCTTGCGCGCCTACTAGCTCATATGCCCGACAAGCAAGCGG
CGATGCTGATCGCTACAAAGTCGAGGGCCCTGAAGACCTGCTTCCTGGAG
AGGGTGATGGACGCCGAACTCTACGACCAAGCCTGCACACTAACCGAC
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Coding sequence (CDS) from alignment at H-paniculata_contig24857:174..971-

>mRNA_H-paniculata_contig24857.6751.1 ID=mRNA_H-paniculata_contig24857.6751.1|Name=mRNA_H-paniculata_contig24857.6751.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1596bp|location=Sequence derived from alignment at H-paniculata_contig24857:174..971- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTACGGGGTAGCGGTCTCGGGCGGCGCGGAGCTCATGGGCCTCCGCGT
GAAAGCACACCACCAATCGGGGCATTGGCTTATCACCCTCGACTGTACCA
ATACCTTCAACTCTGTCAAGCGGGCGGCGATCTTGGAAGAAGTGGCAATC
CGCACCCCGGGACTGACACTCTTCGTTGCCAAATGCTACGGAGAGAAGCC
GGCAGATCAAATTTTCCAGATGGACACCGGCGAACGCAGGAGAATCTCCT
CGAGCACGGGAATCCACCAGGGTTACGGACTGGGACTCGCCCTTTTCTAC
ATGCCCGAGGGACCGCTCTTGCGCAGGTGCGGAGAACAATGCGAGGGTCT
GGGGGTGGAGCTATTGGCCTACCTAGACGATCTGGTGCTAGCAATGGGGG
AGCTGACGGGAGAAAACTTACGGGCAATACATTTCCTCGTGCAAGAGCTA
GCACGCGTAGGAGTGCAGATTAACAACGCCAACACGAAGGCGGTGCCCCC
AATGAACCATATCCCGACCGAAAGAGAGACTGCTGCGGTGGCGGCGATAG
GCATCAGCGTTGCAGAGGGAAGTGCTGTGGTGGTGGGTACACCGATTGGG
ACCGACGCATTCGTTCAGCAGCACGCCGTCACGGTAGTCAAGGAAAAGGG
GGCGGAGCACCTTGCGCGCCTACTAGCTCATATGCCCGACAAGCAAGCGG
CGATGCTGATCGCTACAAAGTCGAGGGCCCTGAAGACCTGCTTCCTGGAG
AGGGTGATGGACGCCGAACTCTACGACCAAGCCTGCACACTAACCGACCA
GTACGGGGTAGCGGTCTCGGGCGGCGCGGAGCTCATGGGCCTCCGCGTGA
AAGCACACCACCAATCGGGGCATTGGCTTATCACCCTCGACTGTACCAAT
ACCTTCAACTCTGTCAAGCGGGCGGCGATCTTGGAAGAAGTGGCAATCCG
CACCCCGGGACTGACACTCTTCGTTGCCAAATGCTACGGAGAGAAGCCGG
CAGATCAAATTTTCCAGATGGACACCGGCGAACGCAGGAGAATCTCCTCG
AGCACGGGAATCCACCAGGGTTACGGACTGGGACTCGCCCTTTTCTACAT
GCCCGAGGGACCGCTCTTGCGCAGGTGCGGAGAACAATGCGAGGGTCTGG
GGGTGGAGCTATTGGCCTACCTAGACGATCTGGTGCTAGCAATGGGGGAG
CTGACGGGAGAAAACTTACGGGCAATACATTTCCTCGTGCAAGAGCTAGC
ACGCGTAGGAGTGCAGATTAACAACGCCAACACGAAGGCGGTGCCCCCAA
TGAACCATATCCCGACCGAAAGAGAGACTGCTGCGGTGGCGGCGATAGGC
ATCAGCGTTGCAGAGGGAAGTGCTGTGGTGGTGGGTACACCGATTGGGAC
CGACGCATTCGTTCAGCAGCACGCCGTCACGGTAGTCAAGGAAAAGGGGG
CGGAGCACCTTGCGCGCCTACTAGCTCATATGCCCGACAAGCAAGCGGCG
ATGCTGATCGCTACAAAGTCGAGGGCCCTGAAGACCTGCTTCCTGGAGAG
GGTGATGGACGCCGAACTCTACGACCAAGCCTGCACACTAACCGAC
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