prot_H-paniculata_contig24844.6747.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24844.6747.1
Unique Nameprot_H-paniculata_contig24844.6747.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length54
Homology
BLAST of mRNA_H-paniculata_contig24844.6747.1 vs. uniprot
Match: D7G5L8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L8_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 1.900e-21
Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 MCEDFRKKLAATESQLSAVVRSRLDGVKRSRDLIEDSATQISKLHGQFAKMEE 53
            MC DFRKKL ATESQLS+VVRSRLDGVKR+RDLI+D+A+QISKLHGQFAKMEE
Sbjct:   42 MCADFRKKLTATESQLSSVVRSRLDGVKRARDLIDDNASQISKLHGQFAKMEE 94          
BLAST of mRNA_H-paniculata_contig24844.6747.1 vs. uniprot
Match: A0A835YNU2_9STRA (Exocyst complex component Sec6-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU2_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.680e-12
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 MCEDFRKKLAATESQLSAVVRSRLDGVKRSRDLIEDSATQISKLHGQFAKME 52
            M  ++R+KL A E QLS+VVRSRLDGVKR+RDLI  SA  I +LH QF KME
Sbjct:    6 MQTEYRRKLMAMEGQLSSVVRSRLDGVKRARDLISQSAAHIGELHNQFGKME 57          
BLAST of mRNA_H-paniculata_contig24844.6747.1 vs. uniprot
Match: W7TFT7_9STRA (Exocyst complex component Sec6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFT7_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 3.140e-5
Identity = 23/50 (46.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    4 DFRKKLAATESQLSAVVRSRLDGVKRSRDLIEDSATQISKLHGQFAKMEE 53
            D++KKL++ E QLS +V+ +LDGVKRS D+I+ +  Q+  + G+F  M E
Sbjct:   76 DYKKKLSSLELQLSGMVQVKLDGVKRSMDVIQTANDQMVAVRGEFEGMYE 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24844.6747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5L8_ECTSI1.900e-2186.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNU2_9STRA2.680e-1265.38Exocyst complex component Sec6-domain-containing p... [more]
W7TFT7_9STRA3.140e-546.00Exocyst complex component Sec6 n=2 Tax=Monodopsida... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24844contigH-paniculata_contig24844:121..282 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24844.6747.1mRNA_H-paniculata_contig24844.6747.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24844 121..309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24844.6747.1 ID=prot_H-paniculata_contig24844.6747.1|Name=mRNA_H-paniculata_contig24844.6747.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=54bp
MCEDFRKKLAATESQLSAVVRSRLDGVKRSRDLIEDSATQISKLHGQFAK
MEE*
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