prot_H-paniculata_contig2484.6745.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2484.6745.1
Unique Nameprot_H-paniculata_contig2484.6745.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length735
Homology
BLAST of mRNA_H-paniculata_contig2484.6745.1 vs. uniprot
Match: A0A6H5J9H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H9_9PHAE)

HSP 1 Score: 373 bits (957), Expect = 1.840e-108
Identity = 361/951 (37.96%), Postives = 435/951 (45.74%), Query Frame = 0
Query:    1 MFVKPLEDGQLVLKGVSVEVLSLVTLSKVDKWGRGLFQSSSALPPPRTYKILVTAFRRSATRDKNALTLTAETVDIQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGGSRQGEGEEISGAAKLGDGRGAGDDGDD-EIDSGEVKMPSTALGGVAQCDGGXXXXXAEQXXXXXXXXXXXXXXXXXXXXXXXXGE-----------------------------------------EFVPDPYMRRDETACRKLRVEAAAPLLRMVRSSLPTSEALAGEETEEV---------------------------------------------------------------------------------------------------------------------------------------------------------------AQFLGGGLRLDKDTDATECLLLLEVANDSAFPIFMWRPSTKV------HRGEIV-------NEEGDLSGGGVTEVPGGSRRCLSLRIPRLQVGPEGKVTSGRKNADGPRSPLAVRPLFEWEKALSRHLYNQLGLRWMTDASEAMVMGSRAAAELGGLGEAVGCSSRPNMSLVAAGGAFTSGRRGILAVALDQLGDDGYQRGAPSQQLQLPGAVPACLMGTLLPPVRLTCLPFSFTDPSRMAVAGAPAVLGGVGGSGXGEGGT-DRFKGFPKLGNTAISEVEVDREAAGDGLEGIEGAWAAKTRVDSFLPLSLVVHNPSPWPVEVEVEVSSEIEGCEHTDRRAGAEQVGDERVAGEIAVSDGGGGSCGQGHVMWSGMPSRKLGKVSPGSSVRHGLVACFLKPGEISVTFTCRVKVEGPSAPYGIANATASTTPGVSF-----GSGD-------ECS-GWHPVLCHRPLTVSVLAEN-EANAAGLAQAQVFRTGGRIGGLPA 722
            +F+KPLEDGQ+VL+GVSVEVLSLVT+ +VDK+GRG+     A PPPRTYK L   FR+     K AL  T +TVDI AXXXXXXXXXXXXXXXXXX                  E GGS       +       +G G G  G D E+  G   + S            XXXXX   XXXXXXXX        XXXXXXXX                                           EFVPDP M + ETACRKLRVE+AAP++R+ R+S PTSE LAGEE EEV                                                                                                                                                               AQFLGGGLR D D D+TECLL+LE+ANDSAFP+F WR           HR ++         + G L  G V E+PGGSRRCLSLR+PRL+V PEG+     ++ D PRSPL++RPLF+WEK+L+ H+  +L LRW T   EA+   S        LG A G    PN       G +T+   G         G +G +   PSQ    P AVP CL+G LLPPVRL+CLP +F       VAG  AV GGV  S  G  G     +G P++G      V+V+    G GL  +EGAWAA+T VDSFLP+SLVVHN S WP++V VEV+S  EG E                  E +V  G       GHVMWSGMP R+LGK++PG S  HGL+ACFL PG++S+ FTCRVKVE  SAPYG A +               GS +       EC  GWHPV+CH PL+VSVL +  E       +AQV   G R+GG PA
Sbjct:  889 LFIKPLEDGQVVLRGVSVEVLSLVTMCRVDKFGRGVSPGPRA-PPPRTYKSLRATFRQP----KQAL--TTDTVDIAAXXXXXXXXXXXXXXXXXXE-----------------EEGGSP------VDSEGNPAEGTGVGFGGGDVEVIGGGTGVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPHGREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFVPDPRMWKGETACRKLRVESAAPVVRLSRASPPTSEVLAGEEIEEVLELVNQGGPSVGVMEVWTRPCRSTKKPLASAMSLLFSLADSAXXXXXXXXXXXXXXXEFGGEGGSGSAMSSLGLDVGLAXXXXXXXXXXXXXXXXXVVVPGGAVRLALKLRAGQAANRDVVTEVLVKYSEKEGAPFHRQLRLPLRLTIRGGLRVCSLRVAQFLGGGLRFDVDADSTECLLVLELANDSAFPVFPWRSHRAKQKQQGRHRRQLTAGTIGGPEDGGGLGRGQVVEIPGGSRRCLSLRVPRLRVRPEGRSLG--RDEDEPRSPLSLRPLFDWEKSLASHILEELSLRWSTAREEALAAAS--------LGTAAGGGVVPNPLT----GEWTAAAGG---------GGEGARVSRPSQPRH-PEAVPECLVGVLLPPVRLSCLPCAFVP----GVAGVAAV-GGVXCSAVGANGLFGAGEGVPRVGIDEAGRVQVE----GGGLREVEGAWAAQTTVDSFLPVSLVVHNSSRWPIDVIVEVTSTSEGREE-----------------EGSVYWGNADEDDSGHVMWSGMPRRRLGKLAPGRSACHGLLACFLTPGDVSIGFTCRVKVESASAPYGSATSXXXXXXXXXXXXXXXGSSETFDPELGECGDGWHPVMCHLPLSVSVLPKTAEGREEKANKAQVRHVGPRVGGAPA 1759          
BLAST of mRNA_H-paniculata_contig2484.6745.1 vs. uniprot
Match: D8LGF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF7_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 3.930e-99
Identity = 310/704 (44.03%), Postives = 376/704 (53.41%), Query Frame = 0
Query:    7 EDGQLVLKGVSVEVLSLVTLSKVDKWGRGLFQSSSALPPPRTYKILVTAFRRSATRDKNALTLTAETVDIQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGGSRQGEGEEISGAAKLGDGRGAGDDGDD-EIDSGEVKMPSTALGGVAQCDGGXXXXXAEQXXXXXXXXXXXXXXXXXXXXXXXXGE------------------------------------------------------EFVPDPYMRRDETACRKLRVEAAAPLLRMVRSSLPTSEALAGEETEEVAQFLGGGLRLDKDTDATECLLLLEVANDSAFPIFMWRPSTKV------HRGEIV-------NEEGDLSGGGVTEVPGGSRRCLSLRIPRLQVGPEGKVTSGRKNADGPRSPLAVRPLFEWEKALSRHLYNQLGLRWMTDASEAMVMGSRAAAELGGLGEAVGCSSRPNMSLVAAGGA---FTSGRRGILAVALDQLGDDGYQRGA-------------------PSQQLQLPGAVPACLMGTLLPPVRLTCLPFSFTDPSRMAVAGAPAVLGGVGGSGXGEGGTDRF----KGFPKLGNTAISEVEVDREAAGDGLEGIEGAWAAKTRVDSFLPLSLVVHNPSPWPVEVEVEVSSEIEGCEHTDRRAGAEQVGDERVAGEIAVSDGGGGSCGQGHVMWSGMPSRK 616
            EDGQ+VL+GVSVEVLSLVT+ +VDK+GRG+     A PPPRTYK L   FR+     K AL  T +TVDI AXXXXXXXXXXXXXXXXXX                  E GGS       +       +G G G  G D E+  G   + S+           XXXXX   XXXXXXXXXXXXXXXXXXXXXXXX                                                        EF PDP MR+ ETACRKLRVE+AAP++R+ R+S PTSE LAGEE  EVAQFLGGGL  D D D+TECLL+LE+ANDSAFP+F WR           HR ++         + G L  G V E+P GSRRCLSLR+PRL+V PEG+ +SGR + D PRSPL++RPLF+WEK+L+ H+  +L LRW T   EA+   S   A  GG    V           +AGG    + SGRRG + +ALDQ+G+DG    +                   PSQ    P AVP CL+G LLPPVRL+CLP +F           P+V GG GG G    G        +G P++G      V+V+    G G+  +EGAWAA+T VDSFLP+SLVVHN S WP++V VEV+S  EG E         +  D+                  GHVMWSGMP R+
Sbjct:  292 EDGQVVLRGVSVEVLSLVTMCRVDKFGRGVSPGPRA-PPPRTYKSLRATFRQP----KQAL--TTDTVDIAAXXXXXXXXXXXXXXXXXXE-----------------EEGGSP------VDSEGNPAEGTGVGFGGGDVEVIGGGTGVSSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFTPDPRMRKGETACRKLRVESAAPVVRLSRASPPTSEVLAGEEIVEVAQFLGGGLSFDGDADSTECLLVLELANDSAFPVFPWRSHRAKQQQQGRHRRQLTAGTIGGPEDGGGLGRGQVVEIPRGSRRCLSLRVPRLRVRPEGR-SSGR-DGDEPRSPLSLRPLFDWEKSLASHILEELSLRWSTAREEALAAASLGTASGGG----VVPDPFTGEGTASAGGGEEGWRSGRRGCVRIALDQVGEDGSCHRSSXXXXXXXXXXXXXAGVSRPSQPRH-PEAVPECLLGVLLPPVRLSCLPCAFV----------PSVAGGGGGVGWSAAGAKGLFGAGEGAPRVGIDEAGRVQVE----GGGIRDVEGAWAAQTTVDSFLPVSLVVHNSSRWPIDVLVEVTSTSEGREEGGSVCWGNEDEDD-----------------SGHVMWSGMPRRR 927          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2484.6745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J9H9_9PHAE1.840e-10837.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGF7_ECTSI3.930e-9944.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2484contigH-paniculata_contig2484:2893..20318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2484.6745.1mRNA_H-paniculata_contig2484.6745.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2484 838..21089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2484.6745.1 ID=prot_H-paniculata_contig2484.6745.1|Name=mRNA_H-paniculata_contig2484.6745.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=735bp
MFVKPLEDGQLVLKGVSVEVLSLVTLSKVDKWGRGLFQSSSALPPPRTYK
ILVTAFRRSATRDKNALTLTAETVDIQAAAAEAAAEAELSSSDHSATAAA
GRSESRGSDEEGEGELGGSRQGEGEEISGAAKLGDGRGAGDDGDDEIDSG
EVKMPSTALGGVAQCDGGGGGGGAEQGGEAGDGKDEGGSSGEQKEEEEED
GEEFVPDPYMRRDETACRKLRVEAAAPLLRMVRSSLPTSEALAGEETEEV
AQFLGGGLRLDKDTDATECLLLLEVANDSAFPIFMWRPSTKVHRGEIVNE
EGDLSGGGVTEVPGGSRRCLSLRIPRLQVGPEGKVTSGRKNADGPRSPLA
VRPLFEWEKALSRHLYNQLGLRWMTDASEAMVMGSRAAAELGGLGEAVGC
SSRPNMSLVAAGGAFTSGRRGILAVALDQLGDDGYQRGAPSQQLQLPGAV
PACLMGTLLPPVRLTCLPFSFTDPSRMAVAGAPAVLGGVGGSGGGEGGTD
RFKGFPKLGNTAISEVEVDREAAGDGLEGIEGAWAAKTRVDSFLPLSLVV
HNPSPWPVEVEVEVSSEIEGCEHTDRRAGAEQVGDERVAGEIAVSDGGGG
SCGQGHVMWSGMPSRKLGKVSPGSSVRHGLVACFLKPGEISVTFTCRVKV
EGPSAPYGIANATASTTPGVSFGSGDECSGWHPVLCHRPLTVSVLAENEA
NAAGLAQAQVFRTGGRIGGLPAVTNQEKEGRGTR*
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