prot_H-paniculata_contig24830.6743.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24830.6743.1 vs. uniprot
Match: A0A6H5JKT7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKT7_9PHAE) HSP 1 Score: 102 bits (254), Expect = 6.040e-23 Identity = 44/126 (34.92%), Postives = 77/126 (61.11%), Query Frame = 0
Query: 1 VTDTEEPPVRFSDIKKLTHKKLWNEAVRVEFEGLENLNAWTYVDSVRKGSNVVSARWLFAWKIDAQGNVTKPEARLIARGFIQQHIVDFLEVFAPTVAASSVKMVIAVAVENDWGMWQLDVKQAFI 126
+ D E + + ++ + +W +A+ EFEGL + + G NV++ARW++ WK D G + K EARL+A GF Q+H+VD+L F+PT ASS+++++A+A + D + +++QAF+
Sbjct: 122 IQDVESESGSYQEARQSKYSTIWGKAMSAEFEGLLRAGTFALAEKAPLGCNVINARWVYKWKADETGKIVKAEARLVAEGFKQKHVVDYLGTFSPTANASSIRLLVALACKYDLEFFHFEIEQAFV 247
BLAST of mRNA_H-paniculata_contig24830.6743.1 vs. uniprot
Match: A0A699UG59_TANCI (Ribonuclease H-like domain, reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699UG59_TANCI) HSP 1 Score: 92.0 bits (227), Expect = 4.000e-21 Identity = 42/112 (37.50%), Postives = 72/112 (64.29%), Query Frame = 0
Query: 15 KKLTHKKLWNEAVRVEFEGLENLNAWTYVDSVRKGSNVVSARWLFAWKIDAQGNVTKPEARLIARGFIQQHIVDFLEVFAPTVAASSVKMVIAVAVENDWGMWQLDVKQAFI 126
K+ + + W EA++VE + + N W + ++ KG +S +W+F K +A GN+ K +ARL+A+G+IQQH + F EVFAP ++++++A+A N W + LD+K AF+
Sbjct: 39 KEASSDQKWIEAMKVELDSINRNNTWE-LTTLPKGHKAISLKWVFKTKKNANGNIIKHKARLVAKGYIQQHGIYFKEVFAPVSRTETIRLLLAIAANNKWEVHHLDIKAAFL 149
BLAST of mRNA_H-paniculata_contig24830.6743.1 vs. uniprot
Match: A0A5B7B5N1_DAVIN (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7B5N1_DAVIN) HSP 1 Score: 90.1 bits (222), Expect = 1.800e-20 Identity = 45/121 (37.19%), Postives = 73/121 (60.33%), Query Frame = 0
Query: 11 FSDIKKLTHKKL-----WNEAVRVEFEGLENLNAWTYVDSVRKGSNVVSARWLFAWKIDAQGNVTKPEARLIARGFIQQHIVDFLEVFAPTVAASSVKMVIAVAVENDWGMWQLDVKQAFI 126
FSD +T K+ W +A+ E E +E N W + + KG N + +W++ K+ G V K +ARL+A+G+ Q+ VD+ EVFAP ++++VIA+A +N W ++Q+DVK AF+
Sbjct: 28 FSDCDPVTFKEAVKESKWRKAMDTEIEAIERNNTWELTE-LPKGQNTIGVKWVYKTKLKKTGEVDKYKARLVAKGYKQEFGVDYKEVFAPVARHDTIRLVIALAAQNSWLIFQMDVKSAFL 147
BLAST of mRNA_H-paniculata_contig24830.6743.1 vs. uniprot
Match: A0A2U1P6C5_ARTAN (Ribonuclease H-like domain, Reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1P6C5_ARTAN) HSP 1 Score: 95.5 bits (236), Expect = 2.130e-20 Identity = 43/112 (38.39%), Postives = 72/112 (64.29%), Query Frame = 0
Query: 15 KKLTHKKLWNEAVRVEFEGLENLNAWTYVDSVRKGSNVVSARWLFAWKIDAQGNVTKPEARLIARGFIQQHIVDFLEVFAPTVAASSVKMVIAVAVENDWGMWQLDVKQAFI 126
K+ + + W EA++VE + + N W + ++ KG + +W+F K DA GN+ K +ARL+A+G+IQ+H +DF EVFAP ++++++A+A N W + LDVK AF+
Sbjct: 164 KEASTDQKWIEAMKVELDSINRNNTWE-LTTLPKGHKAIGLKWVFKTKKDANGNIVKHKARLVAKGYIQEHGIDFEEVFAPVARMETIRLLLAIAANNKWEVHHLDVKSAFL 274
BLAST of mRNA_H-paniculata_contig24830.6743.1 vs. uniprot
Match: A0A2U1LZW0_ARTAN (Ribonuclease H-like domain, Reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LZW0_ARTAN) HSP 1 Score: 95.5 bits (236), Expect = 2.230e-20 Identity = 43/112 (38.39%), Postives = 72/112 (64.29%), Query Frame = 0
Query: 15 KKLTHKKLWNEAVRVEFEGLENLNAWTYVDSVRKGSNVVSARWLFAWKIDAQGNVTKPEARLIARGFIQQHIVDFLEVFAPTVAASSVKMVIAVAVENDWGMWQLDVKQAFI 126
K+ + + W EA++VE + + N W + ++ KG + +W+F K DA GN+ K +ARL+A+G+IQ+H +DF EVFAP ++++++A+A N W + LDVK AF+
Sbjct: 563 KEASTDQKWIEAMKVELDSINRNNTWE-LTTLPKGHKAIGLKWVFKTKKDANGNIVKHKARLVAKGYIQEHGIDFEEVFAPVARMETIRLLLAIAANNKWEVHHLDVKSAFL 673
BLAST of mRNA_H-paniculata_contig24830.6743.1 vs. uniprot
Match: A0A699PHI9_TANCI (Ribonuclease H-like domain, reverse transcriptase, RNA-dependent DNA polymerase (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699PHI9_TANCI) HSP 1 Score: 91.3 bits (225), Expect = 2.980e-20 Identity = 41/112 (36.61%), Postives = 71/112 (63.39%), Query Frame = 0
Query: 15 KKLTHKKLWNEAVRVEFEGLENLNAWTYVDSVRKGSNVVSARWLFAWKIDAQGNVTKPEARLIARGFIQQHIVDFLEVFAPTVAASSVKMVIAVAVENDWGMWQLDVKQAFI 126
K+ ++ + W EA++VE + + N W + ++ G +S +W+F K D GN+ K +ARL+A+G+I +H +DF EVFAP ++++++A+A N W + LDVK AF+
Sbjct: 9 KEASNDQKWIEAMKVELDFINRNNTWE-LTTLPTGHKAISLKWVFKTKKDENGNIIKHKARLVAKGYIHEHGIDFEEVFAPVARMKTIRLILAIAANNKWEVHHLDVKSAFL 119
BLAST of mRNA_H-paniculata_contig24830.6743.1 vs. uniprot
Match: A0A5N6LYV3_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LYV3_9ASTR) HSP 1 Score: 90.9 bits (224), Expect = 4.100e-20 Identity = 47/123 (38.21%), Postives = 73/123 (59.35%), Query Frame = 0
Query: 4 TEEPPVRFSDIKKLTHKKLWNEAVRVEFEGLENLNAWTYVDSVRKGSNVVSARWLFAWKIDAQGNVTKPEARLIARGFIQQHIVDFLEVFAPTVAASSVKMVIAVAVENDWGMWQLDVKQAFI 126
TE P+ F ++ T K W++A++ E +E W D + G + +W+F K DA G +TK +ARL+A+G+IQQH VDF EVFAP +V++++ +A + W + LDVK AF+
Sbjct: 37 TEGEPLNF---REATGNKEWDDAMKSEIASIERNKTWVLTD-IPLGHRPIGLKWVFKIKRDATGTITKHKARLVAKGYIQQHGVDFDEVFAPVARLETVRLLLDLATQRGWEVHHLDVKSAFL 155
BLAST of mRNA_H-paniculata_contig24830.6743.1 vs. uniprot
Match: A0A6L2KMI8_TANCI (Ribonuclease H-like domain, reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2KMI8_TANCI) HSP 1 Score: 92.8 bits (229), Expect = 5.290e-20 Identity = 42/112 (37.50%), Postives = 72/112 (64.29%), Query Frame = 0
Query: 15 KKLTHKKLWNEAVRVEFEGLENLNAWTYVDSVRKGSNVVSARWLFAWKIDAQGNVTKPEARLIARGFIQQHIVDFLEVFAPTVAASSVKMVIAVAVENDWGMWQLDVKQAFI 126
K+ + + W EA++VE + + N W + ++ KG + +W+F K DA GN+ K +ARL+A+G+IQ+H +DF EVFAP ++++++A+A N W + L+VK AF+
Sbjct: 207 KEASSDQKWIEAMKVELDSINRNNTWE-LTTLPKGHKAIGLKWVFKTKKDANGNIIKHKARLLAKGYIQEHGIDFEEVFAPVARMETIRLLLAIAANNKWEVRHLNVKSAFL 317
BLAST of mRNA_H-paniculata_contig24830.6743.1 vs. uniprot
Match: A0A699I2V2_TANCI (Ribonuclease H-like domain, reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699I2V2_TANCI) HSP 1 Score: 94.4 bits (233), Expect = 5.580e-20 Identity = 42/112 (37.50%), Postives = 72/112 (64.29%), Query Frame = 0
Query: 15 KKLTHKKLWNEAVRVEFEGLENLNAWTYVDSVRKGSNVVSARWLFAWKIDAQGNVTKPEARLIARGFIQQHIVDFLEVFAPTVAASSVKMVIAVAVENDWGMWQLDVKQAFI 126
K+ + + W +A++VE + + N W + ++ KG + +W+F K DA GN+ K +ARL+A+G+IQ+H +DF EVFAP ++++++A+A N W + LDVK AF+
Sbjct: 551 KEASSDQKWIKAIKVELDSINRNNTWE-LTTLPKGQKAIGLKWVFKTKKDANGNIIKHKARLVAKGYIQEHGIDFKEVFAPVARMETIRLLLAIAANNKWEVHHLDVKFAFL 661
BLAST of mRNA_H-paniculata_contig24830.6743.1 vs. uniprot
Match: A0A392M0Q4_9FABA (Copia-type polyprotein n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M0Q4_9FABA) HSP 1 Score: 94.0 bits (232), Expect = 7.480e-20 Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 0
Query: 8 PVRFSDIKKLTHKKLWNEAVRVEFEGLENLNAWTYVDSVRKGSNVVSARWLFAWKIDAQGNVTKPEARLIARGFIQQHIVDFLEVFAPTVAASSVKMVIAVAVENDWGMWQLDVKQAFI 126
PV F D K +W +A+ E + +E W VD K + + +W+F K++ G ++K +ARL+ARGF+Q+H +D+ EVFAP +V++V+A+A +N W M+ LDVK AF+
Sbjct: 220 PVNFKDALK---SNVWRKAMEEELKSIEKNQTWKLVDLPDKKAKI-DVKWVFKVKLNPDGTISKHKARLVARGFLQKHGIDYNEVFAPVARIETVRLVVALACKNRWKMYHLDVKSAFL 334 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24830.6743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig24830.6743.1 ID=prot_H-paniculata_contig24830.6743.1|Name=mRNA_H-paniculata_contig24830.6743.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bpback to top |