mRNA_H-paniculata_contig2483.6741.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2483.6741.1 vs. uniprot
Match: A0A6H5LKK9_9PHAE (Abhydrolase_3 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKK9_9PHAE) HSP 1 Score: 289 bits (739), Expect = 5.450e-87 Identity = 166/303 (54.79%), Postives = 186/303 (61.39%), Query Frame = 1
Query: 226 IEFLDVPYFEGEDACKVKHRLDVYIPGAPFPRPRSRTCLFVHGGSWQRGDRRHPVVPGEFYGKVGRTLARAGMVGLVMSYRLAPEVQHPEQVRDVARAVRWAKENVSRYGGDPRDLVLIGHSAGAHLAALCLSDPQWLAEQGLVVSITPPSTSTSPPLAPPRPNTPSVSFDGSISNRNNDIDTFSKGIMRETCPDRSTLPTISEGTEKGQTTXXXXXXXQISCGSQSASPPQSTGPGRSPSRRSLQPPLQPRSQSPVVTAFVGISGVYDIPRMAGNVVGQMLARVAFGDERWGWRRVSPVHIV 1134
+EFLDVPY+EG+DAC+ KHRLDVYIP APFPRPRSRTCLFVHGGSWQRGDRRHP VP FYG VGR A G+VGLVMSYRLAPEVQHPEQVRDVARA+RWA++N SRYGGD DLVL+GHSAGAHLAAL L+D +WL E G++ +P PP S S G C + P + G T XXXXX ST P R VV+ FVGISGVYDIPRMAGNVVG +L R AFG++R W SPVH V
Sbjct: 41 LEFLDVPYYEGDDACEEKHRLDVYIPSAPFPRPRSRTCLFVHGGSWQRGDRRHPAVPDHFYGNVGRAFAAKGLVGLVMSYRLAPEVQHPEQVRDVARAIRWARDNASRYGGDGDDLVLVGHSAGAHLAALSLADGRWLEEAGVLAP--------TPRAGPPGGGATSXXXXXS-------------GTKLAAC----SAPAAAVADGDGSTPPEXXXXXS------------STRPAR------------------VVSGFVGISGVYDIPRMAGNVVGGVLVRAAFGNDRRAWHAASPVHRV 288
BLAST of mRNA_H-paniculata_contig2483.6741.1 vs. uniprot
Match: D8LGM8_ECTSI (Lipase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM8_ECTSI) HSP 1 Score: 250 bits (639), Expect = 4.490e-73 Identity = 113/144 (78.47%), Postives = 127/144 (88.19%), Query Frame = 1
Query: 226 IEFLDVPYFEGEDACKVKHRLDVYIPGAPFPRPRSRTCLFVHGGSWQRGDRRHPVVPGEFYGKVGRTLARAGMVGLVMSYRLAPEVQHPEQVRDVARAVRWAKENVSRYGGDPRDLVLIGHSAGAHLAALCLSDPQWLAEQGLV 657
+ FLDVPY+EG+DAC+ KHRLDVYIP APFPRPRSRTCLFVHGGSWQRGDRRHP VP +FYG VGR A G+VGLVMSYRLAPEVQHPEQVRDVARA+RWA++N SRYGGD DLVL+GHSAGAHLAAL L+D +WL E G++
Sbjct: 57 LAFLDVPYYEGDDACEEKHRLDVYIPSAPFPRPRSRTCLFVHGGSWQRGDRRHPAVPDQFYGNVGRAFAAKGLVGLVMSYRLAPEVQHPEQVRDVARAIRWARDNASRYGGDGDDLVLVGHSAGAHLAALSLADGRWLEEAGVL 200
BLAST of mRNA_H-paniculata_contig2483.6741.1 vs. uniprot
Match: A0A836C8K7_9STRA (Alpha/Beta hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8K7_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.220e-40 Identity = 72/123 (58.54%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 232 FLDVPYFEGEDACKVKHRLDVYIPGAPFPRPRSRTCLFVHGGSWQRGDRRHPVVPGEFYGKVGRTLARAGMVGLVMSYRLAPEVQHPEQVRDVARAVRWAKENVSRYGGDPRDLVLIGHSAGA 600
FLD+PYF KHRLDVY+ FPR + R +F HGGSW RG RR + P YG +GR A AGMVG+V+SYRLAP V+HPEQV DVARAV W N++RYGG D+VL+GHSAGA
Sbjct: 3 FLDIPYFGDPATAPDKHRLDVYMQDGAFPREKQRVVIFCHGGSWARGGRRMSLAPQLLYGNIGRACASAGMVGVVISYRLAPSVKHPEQVLDVARAVSWVHANIARYGGRQDDIVLMGHSAGA 125
BLAST of mRNA_H-paniculata_contig2483.6741.1 vs. uniprot
Match: A0A8K1C4T1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4T1_PYTOL) HSP 1 Score: 134 bits (337), Expect = 2.730e-32 Identity = 64/126 (50.79%), Postives = 84/126 (66.67%), Query Frame = 1
Query: 277 KHRLDVYIPGAPFPRPRSRTCLFVHGGSWQRGDRRHPVVPGEFYGKVGRTLARAGMVGLVMSYRLAPEVQHPEQVRDVARAVRWAKENVSRYGGDPRDLVLIGHSAGAHLAALCLSDPQWLAEQGL 654
K L++ IP F R R TC+FVHGGSWQRGD+ G F + + RAG +G+ ++YRL+PEV+HPE RDVA A++W EN+ +YGGDP VLIGHSAGAHL L++P +L E G+
Sbjct: 28 KQTLNLAIPTMQFARRRLPTCVFVHGGSWQRGDK-----AGLFNDGIEQAFVRAGCIGVSLNYRLSPEVKHPEHTRDVAMAMKWLMENIEKYGGDPSGFVLIGHSAGAHLVMQLLANPDYLRECGV 148
BLAST of mRNA_H-paniculata_contig2483.6741.1 vs. uniprot
Match: A0A2P4XF99_9STRA (Kynurenine formamidase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XF99_9STRA) HSP 1 Score: 132 bits (333), Expect = 8.530e-31 Identity = 63/123 (51.22%), Postives = 82/123 (66.67%), Query Frame = 1
Query: 286 LDVYIPGAPFPRPRSRTCLFVHGGSWQRGDRRHPVVPGEFYGKVGRTLARAGMVGLVMSYRLAPEVQHPEQVRDVARAVRWAKENVSRYGGDPRDLVLIGHSAGAHLAALCLSDPQWLAEQGL 654
LD+ IP PR + TC+FVHGGSWQRGD+ G + RAG +G+ ++YRL+PEVQHPE V+DVA AV W N++++GGDP LVL+GHSAGAHL L+DPQ+L G+
Sbjct: 30 LDIAIPRRIPPRAKLPTCVFVHGGSWQRGDK-----SGGLNQDIDEAFVRAGCLGVSVNYRLSPEVQHPEHVKDVAAAVTWLHRNIAKFGGDPNKLVLVGHSAGAHLVMQILADPQFLLATGI 147
BLAST of mRNA_H-paniculata_contig2483.6741.1 vs. uniprot
Match: A0A329SAI4_9STRA (Kynurenine formamidase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SAI4_9STRA) HSP 1 Score: 132 bits (333), Expect = 8.940e-31 Identity = 63/123 (51.22%), Postives = 82/123 (66.67%), Query Frame = 1
Query: 286 LDVYIPGAPFPRPRSRTCLFVHGGSWQRGDRRHPVVPGEFYGKVGRTLARAGMVGLVMSYRLAPEVQHPEQVRDVARAVRWAKENVSRYGGDPRDLVLIGHSAGAHLAALCLSDPQWLAEQGL 654
LD+ IP PR + TC+FVHGGSWQRGD+ G + RAG +G+ ++YRL+PEVQHPE +DVA AV W N++++GGDP LVL+GHSAGAHL L+DPQ+LA G+
Sbjct: 30 LDIAIPRRIPPRAKLPTCVFVHGGSWQRGDK-----SGGLNKDIDEAFVRAGCLGVSVNYRLSPEVQHPEHAKDVAAAVTWLHRNIAKFGGDPDKLVLVGHSAGAHLVMQILADPQYLAATGM 147
BLAST of mRNA_H-paniculata_contig2483.6741.1 vs. uniprot
Match: A0A3F2S307_9STRA (Abhydrolase_3 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S307_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.000e-30 Identity = 67/144 (46.53%), Postives = 91/144 (63.19%), Query Frame = 1
Query: 229 EFLDVPYFEGEDACKVKHRLDVYIPGAPFPRPRSRTCLFVHGGSWQRGDRRHPVVPG--EFYGKVGRTLARAGMVGLVMSYRLAPEVQHPEQVRDVARAVRWAKENVSRYGGDPRDLVLIGHSAGAHLAALCLSDPQWLAEQGL 654
++ DV Y A + +LD+ IP PR + TC+FVHGGSWQRGD+ + G E + G G +G+ ++YRL+PEVQHPE V+DVA A+ W NV+++GGDP LVL+GHSAGAHL L+DP +L E G+
Sbjct: 13 KWQDVAYVSEPHALQ---KLDIAIPRKIPPRAKLPTCVFVHGGSWQRGDKNGGLNSGIDEAFVSAG------GCLGVSVNYRLSPEVQHPEHVKDVAAAITWVHHNVAKFGGDPTKLVLVGHSAGAHLVMQILADPAYLQEAGM 147
BLAST of mRNA_H-paniculata_contig2483.6741.1 vs. uniprot
Match: A0A6A4EWQ3_9STRA (Kynurenine formamidase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EWQ3_9STRA) HSP 1 Score: 131 bits (329), Expect = 3.080e-30 Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = 1
Query: 286 LDVYIPGAPFPRPRSRTCLFVHGGSWQRGDRRHPVVPGEFYGKVGRTLARAGMVGLVMSYRLAPEVQHPEQVRDVARAVRWAKENVSRYGGDPRDLVLIGHSAGAHLAALCLSDPQWLAEQGL 654
LD+ IP PR + TC+FVHGGSWQRGD+ G + RAG +G+ ++YRL+PEVQHPE V+DVA AV W N++++GGDP L+L+GHSAGAHL L+DPQ+L G+
Sbjct: 30 LDIAIPRRIPPRSKLPTCVFVHGGSWQRGDK-----SGGLNQDIDEAFVRAGCLGVSVNYRLSPEVQHPEHVKDVAAAVTWLHRNIAKFGGDPDKLLLVGHSAGAHLVMQILADPQYLKAAGM 147
BLAST of mRNA_H-paniculata_contig2483.6741.1 vs. uniprot
Match: W2NGQ4_PHYPR (Kynurenine formamidase n=16 Tax=Phytophthora TaxID=4783 RepID=W2NGQ4_PHYPR) HSP 1 Score: 129 bits (325), Expect = 3.820e-30 Identity = 62/123 (50.41%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 286 LDVYIPGAPFPRPRSRTCLFVHGGSWQRGDRRHPVVPGEFYGKVGRTLARAGMVGLVMSYRLAPEVQHPEQVRDVARAVRWAKENVSRYGGDPRDLVLIGHSAGAHLAALCLSDPQWLAEQGL 654
LD+ IP PR TC+FVHGGSWQRGD+ G + AG +G+ ++YRL+PEVQHPE V+DVA AV W N++++GGDP LVL+GHSAGAHL L+DPQ+L G+
Sbjct: 30 LDIAIPRRIPPRSNLPTCVFVHGGSWQRGDKN-----GGLNQDIDEAFVGAGYLGVSVNYRLSPEVQHPEHVKDVAAAVTWLYRNIAKFGGDPNKLVLVGHSAGAHLVMQILADPQYLTAAGM 147
BLAST of mRNA_H-paniculata_contig2483.6741.1 vs. uniprot
Match: A0A0S7X0G7_9BACT (COesterase domain-containing protein n=1 Tax=Planctomycetes bacterium DG_58 TaxID=1703415 RepID=A0A0S7X0G7_9BACT) HSP 1 Score: 130 bits (328), Expect = 4.390e-30 Identity = 62/138 (44.93%), Postives = 87/138 (63.04%), Query Frame = 1
Query: 238 DVPYFEGEDACKVKHRLDVYIPGAPFPRPRSRTCLFVHGGSWQRGDRRHPVVPGEFYGKVGRTLARAGMVGLVMSYRLAPEVQHPEQVRDVARAVRWAKENVSRYGGDPRDLVLIGHSAGAHLAALCLSDPQWLAEQG 651
++PY+ GEDA + KHRLD+Y P + + +VHGG+WQ G + F +G+T A G++ + ++YRL+P V+HP VRDV RA W K N+ RYGG+P DL + GHSAGAHL AL + ++LAE G
Sbjct: 45 NIPYYTGEDAVRTKHRLDIY---QPVGKKNATVLFYVHGGAWQFGSK-------SFRANIGKTFAGQGILTVSINYRLSPPVKHPGHVRDVVRAFDWVKRNIHRYGGNPDDLFICGHSAGAHLVALVALNEKYLAEVG 172 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2483.6741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2483.6741.1 >prot_H-paniculata_contig2483.6741.1 ID=prot_H-paniculata_contig2483.6741.1|Name=mRNA_H-paniculata_contig2483.6741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=625bp MQSLRRGRLTTDLRPYTWIITRHHGRPPALHSSRTIINGTPRFSSGAPPTback to top mRNA from alignment at H-paniculata_contig2483:4355..8021- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2483.6741.1 ID=mRNA_H-paniculata_contig2483.6741.1|Name=mRNA_H-paniculata_contig2483.6741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3667bp|location=Sequence derived from alignment at H-paniculata_contig2483:4355..8021- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2483:4355..8021- >mRNA_H-paniculata_contig2483.6741.1 ID=mRNA_H-paniculata_contig2483.6741.1|Name=mRNA_H-paniculata_contig2483.6741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3750bp|location=Sequence derived from alignment at H-paniculata_contig2483:4355..8021- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |