mRNA_H-paniculata_contig24797.6730.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24797.6730.1 vs. uniprot
Match: A0A6H5KWE3_9PHAE (GCFC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE3_9PHAE) HSP 1 Score: 251 bits (642), Expect = 1.700e-77 Identity = 127/161 (78.88%), Postives = 135/161 (83.85%), Query Frame = 1
Query: 1 QAAFEFLANDLVLPAVRSALVNLWEVRDPGPALQLANTMVRAGVGDQIVQSLLEQVILPKLTRAVTEWNPMTDKVLIHTWIHPWLPLLGSRLAGIFPEIRRKLAAALVHWAPA-DAWAHTMLSPWTTVFDSRSMEALLLKSIVPKVVEGVRASLVINPANQ 480
QAAFEFLANDLVLPAVRSALVN WEVRDP ALQL+ MV AGVGDQIVQSLLEQ ILPKLTR VTEWNP TD V IHTWIHPWLPLLGSRLAG+FPEIRRKL A LVHW D+ + +LSPW VFDSRSMEALL K + PK+V G+RASLVINPANQ
Sbjct: 267 QAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSEAMVLAGVGDQIVQSLLEQAILPKLTRGVTEWNPRTDTVAIHTWIHPWLPLLGSRLAGLFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKHVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQ 427
BLAST of mRNA_H-paniculata_contig24797.6730.1 vs. uniprot
Match: D8LQD4_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD4_ECTSI) HSP 1 Score: 252 bits (644), Expect = 2.590e-75 Identity = 127/161 (78.88%), Postives = 135/161 (83.85%), Query Frame = 1
Query: 1 QAAFEFLANDLVLPAVRSALVNLWEVRDPGPALQLANTMVRAGVGDQIVQSLLEQVILPKLTRAVTEWNPMTDKVLIHTWIHPWLPLLGSRLAGIFPEIRRKLAAALVHWAPA-DAWAHTMLSPWTTVFDSRSMEALLLKSIVPKVVEGVRASLVINPANQ 480
QAAFEFLANDLVLPAVRSALVN WEVRDP ALQL+ MV AGVGDQIVQSLLEQ ILPKLTR VTEWNP TD V IHTWIHPWLPLLGSRLAG+FPEIRRKL A LVHW D+ + +LSPW VFDSRSMEALL K + PK+V G+RASLVINPANQ
Sbjct: 697 QAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSEAMVLAGVGDQIVQSLLEQAILPKLTRGVTEWNPRTDTVAIHTWIHPWLPLLGSRLAGLFPEIRRKLEAVLVHWNDVFDSTVYVILSPWKNVFDSRSMEALLSKFVAPKLVAGLRASLVINPANQ 857
BLAST of mRNA_H-paniculata_contig24797.6730.1 vs. uniprot
Match: A0A2R6W9Z1_MARPO (G-patch domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W9Z1_MARPO) HSP 1 Score: 152 bits (384), Expect = 8.270e-40 Identity = 73/154 (47.40%), Postives = 106/154 (68.83%), Query Frame = 1
Query: 19 LANDLVLPAVRSALVNLWEVRDPGPALQLANTMVRAGVGDQIVQSLLEQVILPKLTRAVTEWNPMTDKVLIHTWIHPWLPLLGSRLAGIFPEIRRKLAAALVHWAPADAWAHTMLSPWTTVFDSRSMEALLLKSIVPKVVEGVRASLVINPANQ 480
L + ++PAVR+A N WE RDP P L+ + + I+Q++LE +++PKLT AV W+P + V IH W+HPWLPLLGSR+ G++ IR KL AL W P+D A+++LSPW +VFD+ S E LL++SIVPK++ ++ LV+NPA+Q
Sbjct: 481 LVMEAIMPAVRTAATNFWEPRDPEPMLRFLEAWEKL-LPSGILQNILEHLVMPKLTVAVDVWDPRQETVPIHAWLHPWLPLLGSRMEGLYLPIRYKLTNALQAWHPSDTSAYSLLSPWQSVFDAASWEQLLVRSIVPKLMYALQ-ELVVNPAHQ 632
BLAST of mRNA_H-paniculata_contig24797.6730.1 vs. uniprot
Match: A0A2R6WIX7_MARPO (G-patch domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WIX7_MARPO) HSP 1 Score: 151 bits (382), Expect = 1.550e-39 Identity = 73/154 (47.40%), Postives = 106/154 (68.83%), Query Frame = 1
Query: 19 LANDLVLPAVRSALVNLWEVRDPGPALQLANTMVRAGVGDQIVQSLLEQVILPKLTRAVTEWNPMTDKVLIHTWIHPWLPLLGSRLAGIFPEIRRKLAAALVHWAPADAWAHTMLSPWTTVFDSRSMEALLLKSIVPKVVEGVRASLVINPANQ 480
L + V+PAVR+A N WE RDP P L+ + + I+Q++LEQ+++PKL+ AV W+P + V IH W+HPWLPLLGSR+ G++ IR KL AL W P+D A+++LSPW VFD+ S E LL++SI+PK++ ++ LV+NPA+Q
Sbjct: 483 LVMEAVMPAVRTATTNFWEPRDPEPMLRFLEAWDKL-LPSGILQNILEQLVMPKLSVAVDMWDPRQETVPIHAWLHPWLPLLGSRMEGLYLPIRYKLTTALQAWHPSDTSAYSLLSPWQAVFDAGSWEQLLVRSIMPKLMYALQ-ELVVNPAHQ 634
BLAST of mRNA_H-paniculata_contig24797.6730.1 vs. uniprot
Match: A0A835J5K0_9ROSI (G-patch domain-containing protein n=3 Tax=Saliceae TaxID=238069 RepID=A0A835J5K0_9ROSI) HSP 1 Score: 149 bits (377), Expect = 7.460e-39 Identity = 72/157 (45.86%), Postives = 104/157 (66.24%), Query Frame = 1
Query: 10 FEFLANDLVLPAVRSALVNLWEVRDPGPALQLANTMVRAGVGDQIVQSLLEQVILPKLTRAVTEWNPMTDKVLIHTWIHPWLPLLGSRLAGIFPEIRRKLAAALVHWAPADAWAHTMLSPWTTVFDSRSMEALLLKSIVPKVVEGVRASLVINPANQ 480
+E L +++VLPAVR +++N WE RDP P ++ + +V S+L+ +++PKL+ AV W+P + V IH W+HPWLPLLG +L G++ IR KL+ L W P+DA A+T+LSPW TVFD S E L+ + IVPK+ ++ L INPANQ
Sbjct: 485 YEQLVSEVVLPAVRISVINTWEPRDPEPMVRFLESWENLFPAS-VVPSILDNIVMPKLSSAVDSWDPRRETVPIHVWVHPWLPLLGLKLEGLYQMIRMKLSMVLDDWLPSDASAYTILSPWKTVFDPASWERLMRRFIVPKLQVALQ-ELQINPANQ 639
BLAST of mRNA_H-paniculata_contig24797.6730.1 vs. uniprot
Match: A0A0K9RIH9_SPIOL (G-patch domain-containing protein n=3 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RIH9_SPIOL) HSP 1 Score: 149 bits (377), Expect = 7.560e-39 Identity = 70/159 (44.03%), Postives = 102/159 (64.15%), Query Frame = 1
Query: 4 AAFEFLANDLVLPAVRSALVNLWEVRDPGPALQLANTMVRAGVGDQIVQSLLEQVILPKLTRAVTEWNPMTDKVLIHTWIHPWLPLLGSRLAGIFPEIRRKLAAALVHWAPADAWAHTMLSPWTTVFDSRSMEALLLKSIVPKVVEGVRASLVINPANQ 480
A + L ++V PAVR A +N W+ RDP P L+ + + + ++QSLL+ V++PKL+ AV W P + + IH W+HPWLPLLG +L ++ IR KL L W P+D A+T+LSPW TVFD+ S E L+ +SI+PK+++ V +NPANQ
Sbjct: 514 APYSQLVAEVVFPAVRIAGINTWQARDPEPMLRFLESWEKL-LPRSVLQSLLDMVVMPKLSEAVNSWEPCRETIPIHVWVHPWLPLLGQKLETLYQAIRIKLGTVLYKWHPSDMSAYTILSPWKTVFDASSWEQLICRSILPKLID-VMKEFQVNPANQ 670
BLAST of mRNA_H-paniculata_contig24797.6730.1 vs. uniprot
Match: A0A836DEF4_9ROSI (Septin and tuftelin-interacting protein n=2 Tax=Salix TaxID=40685 RepID=A0A836DEF4_9ROSI) HSP 1 Score: 148 bits (374), Expect = 1.890e-38 Identity = 71/157 (45.22%), Postives = 104/157 (66.24%), Query Frame = 1
Query: 10 FEFLANDLVLPAVRSALVNLWEVRDPGPALQLANTMVRAGVGDQIVQSLLEQVILPKLTRAVTEWNPMTDKVLIHTWIHPWLPLLGSRLAGIFPEIRRKLAAALVHWAPADAWAHTMLSPWTTVFDSRSMEALLLKSIVPKVVEGVRASLVINPANQ 480
+E L ++LVLPAVR +++N WE R+P P ++ + +V+S+L+ +++PKL+ AV W+P + V IH W+HPWLPLLG +L G++ IR KL+ L W P+DA A+T+LSPW TVFD S E L+ + IVPK+ ++ INPANQ
Sbjct: 485 YEQLVSELVLPAVRISVINTWEPREPEPMVRFLESWENLFPAS-VVRSILDNIVMPKLSSAVDSWDPRRETVPIHVWVHPWLPLLGLKLEGLYQMIRMKLSMVLDDWLPSDASAYTILSPWKTVFDPASWERLMRRFIVPKLQVALQ-EFQINPANQ 639
BLAST of mRNA_H-paniculata_contig24797.6730.1 vs. uniprot
Match: A0A803MJT5_CHEQI (G-patch domain-containing protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MJT5_CHEQI) HSP 1 Score: 148 bits (374), Expect = 1.920e-38 Identity = 69/154 (44.81%), Postives = 100/154 (64.94%), Query Frame = 1
Query: 19 LANDLVLPAVRSALVNLWEVRDPGPALQLANTMVRAGVGDQIVQSLLEQVILPKLTRAVTEWNPMTDKVLIHTWIHPWLPLLGSRLAGIFPEIRRKLAAALVHWAPADAWAHTMLSPWTTVFDSRSMEALLLKSIVPKVVEGVRASLVINPANQ 480
L +++V PAVR A +N W+ RDP P L+ + + ++QSLL+ V++PKL+ AV W P + + IH W+HPWLPLLG +L ++ IR KL L W P+D A+T+LSPW TVFD+ S E L+ +SI+PK+++ V +NPANQ
Sbjct: 518 LVSEVVFPAVRIAGINTWQARDPEPMLRFLELWEKL-LPRSVLQSLLDMVVMPKLSEAVNSWEPCRETIPIHVWVHPWLPLLGQKLESLYQAIRIKLGTVLHKWHPSDMSAYTILSPWKTVFDASSWEQLISRSILPKLID-VMKEFQVNPANQ 669
BLAST of mRNA_H-paniculata_contig24797.6730.1 vs. uniprot
Match: A0A2K1ILW7_PHYPA (G-patch domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1ILW7_PHYPA) HSP 1 Score: 147 bits (370), Expect = 6.590e-38 Identity = 71/154 (46.10%), Postives = 102/154 (66.23%), Query Frame = 1
Query: 19 LANDLVLPAVRSALVNLWEVRDPGPALQLANTMVRAGVGDQIVQSLLEQVILPKLTRAVTEWNPMTDKVLIHTWIHPWLPLLGSRLAGIFPEIRRKLAAALVHWAPADAWAHTMLSPWTTVFDSRSMEALLLKSIVPKVVEGVRASLVINPANQ 480
L ++V P +R A N+W+ RDP P L+ + G I QS+LE +++PKLT AV W+P ++V IH W+HPWLP LG+R+ ++ IR KL ALV+W P D+ A +LSPW TVFD + E L+L+SI+PK+++ ++ VINPANQ
Sbjct: 486 LVLEIVFPHIRLATTNMWQPRDPEPMLRFLEAWDKLLPGG-IKQSILEGLVMPKLTAAVDAWDPRLEEVPIHAWLHPWLPWLGARMEPLYVPIRYKLNVALVNWHPGDSSALALLSPWKTVFDPANWEMLILRSIMPKLIQAMQ-EFVINPANQ 637
BLAST of mRNA_H-paniculata_contig24797.6730.1 vs. uniprot
Match: A0A2C9VAF8_MANES (G-patch domain-containing protein n=5 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9VAF8_MANES) HSP 1 Score: 146 bits (369), Expect = 9.140e-38 Identity = 75/154 (48.70%), Postives = 101/154 (65.58%), Query Frame = 1
Query: 19 LANDLVLPAVRSALVNLWEVRDPGPALQLANTMVRAGVGDQIVQSLLEQVILPKLTRAVTEWNPMTDKVLIHTWIHPWLPLLGSRLAGIFPEIRRKLAAALVHWAPADAWAHTMLSPWTTVFDSRSMEALLLKSIVPKVVEGVRASLVINPANQ 480
L +++VLPAVR A +N WE RDP P L+ + R + ++QS+L+ V+LPKL+ AV W+P + V IH W+HPWLP LG RL ++ +IR KL+ L W P+DA A+ +LSPW TVFDS S E L+ K IVPK+ E INPA+Q
Sbjct: 502 LVSEVVLPAVRIAGINTWEPRDPEPMLRFFESWERL-LPASVIQSILDNVVLPKLSSAVDLWDPRRETVPIHVWVHPWLPQLGQRLEYLYEKIRMKLSMVLGAWHPSDASAYAILSPWKTVFDSASWENLMRKFIVPKL-EVALQEFQINPADQ 653 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24797.6730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24797.6730.1 >prot_H-paniculata_contig24797.6730.1 ID=prot_H-paniculata_contig24797.6730.1|Name=mRNA_H-paniculata_contig24797.6730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp QAAFEFLANDLVLPAVRSALVNLWEVRDPGPALQLANTMVRAGVGDQIVQback to top mRNA from alignment at H-paniculata_contig24797:151..1581- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24797.6730.1 ID=mRNA_H-paniculata_contig24797.6730.1|Name=mRNA_H-paniculata_contig24797.6730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1431bp|location=Sequence derived from alignment at H-paniculata_contig24797:151..1581- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24797:151..1581- >mRNA_H-paniculata_contig24797.6730.1 ID=mRNA_H-paniculata_contig24797.6730.1|Name=mRNA_H-paniculata_contig24797.6730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=960bp|location=Sequence derived from alignment at H-paniculata_contig24797:151..1581- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |