mRNA_H-paniculata_contig2476.6720.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2476.6720.1 vs. uniprot
Match: D7FHZ6_ECTSI (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ6_ECTSI) HSP 1 Score: 259 bits (663), Expect = 4.580e-74 Identity = 188/458 (41.05%), Postives = 230/458 (50.22%), Query Frame = 2
Query: 509 MGIRAISSVES-EHSLCSCVSQPARPGR--------RRSLHFPADFFDIEIERAHSPVPSWRHTGGSPTRELVRSPPA----RQHSGEGGLVILKRERGHDVGHLSYTR---ASSLGNTPMGS--------------GAIESWDDVSKGPGAALSKLC--------------DAAGEGCPQIPFRCMDSRSRRKGNRAGEAEAGGADSCSSA--------DRAQRIAVDPDTGRSYFVERATVCDACTCCDDVCEVIWCSCCNERRAQLEHSFGPLLESERDNRTQNRSIXXXXXXXXXXSSNTSPSTMVYWGRAGKGDDPDDDGVTMPGCHRNSSGWASSMPPSLSARYSRKAGYTLCEVRRRKLTGACWVVVQGSVYDVTSALEDHPGGKRSVLRNAGGRDCEEDFLFHSKAAKKRWRQYRIGHLVDC-VGENGGDGS-----RTQRISSTECVVS 1708
MG+ S V++ E S C+C+ +P GR R SL PA+ IEIE AH+P+P GGSPT E++ +P R HSG GG V LKR+ DV ++ R A S+G P GS C + G P +PFR S S G R G+ + SA D AQRIAVDPD+G SYFVER+TVCDAC C+D CEV WC+ C+E R LE ++G L+ S + GR + G N G + P LS RY RK+ YTLCEVRRRK+TGACWVV QGSVYDVT+AL DHPGGKRSVL+NAGGRDC EDF FHS+AAKK+WRQYRIG LV C G+ GDG R+ RI+S+ CV+S
Sbjct: 1 MGMHVPSPVDAGEPSPCACLIRPPSAGRQDKDRHDRRMSLPSPAELSVIEIEDAHTPIPLGGFPGGSPTGEVIGTPGRPHRERNHSG-GGFVTLKRKGVRDVVRQAHARSASAGSVGGKPAGSCRTCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCGYDERDHVHDLEANEPLGPPSP-MPFR-RPSGSGSVGGRGSXXXRRGSGTPGSAAAAVASLEDAAQRIAVDPDSGHSYFVERSTVCDACPYCEDTCEVAWCNGCDETRMHLEEAYGKLMLS-------------------------AAEVAGAGGRHXXXXXXCETGAD------NGGGSRLKLAPVLSRRYPRKSSYTLCEVRRRKVTGACWVVSQGSVYDVTAALPDHPGGKRSVLKNAGGRDCAEDFFFHSRAAKKQWRQYRIGSLVACRPGQGDGDGGAAGDERSMRIASS-CVIS 423
BLAST of mRNA_H-paniculata_contig2476.6720.1 vs. uniprot
Match: A0A7S4J744_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J744_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.930e-16 Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 2
Query: 1418 YTLCEVRRRKLTGACWVVVQGSVYDVTSALEDHPGGKRSVLRNAGGR-DCEEDFLFHSKAAKKRWRQYRIGHLVDCVGENG--GDGSRTQRI----SSTECVVS 1708
YT C++RR + W++V +YD TS + HPGGK S+LR +GG+ DCE+D FHSK A K W++ +G L C G G GD S + +S +CV+S
Sbjct: 116 YTPCQLRRHNHADSAWLLVGERIYDATSYVSQHPGGKSSILRKSGGKADCEKDMTFHSKNAIKIWKRNEVGKLTKCPGFLGDFGDNSVNRESDICGASEQCVIS 219
BLAST of mRNA_H-paniculata_contig2476.6720.1 vs. uniprot
Match: A0A0M9G1N5_9TRYP (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9G1N5_9TRYP) HSP 1 Score: 76.6 bits (187), Expect = 2.190e-12 Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 2
Query: 1418 YTLCEVRRRKLTGACWVVVQGSVYDVTSALEDHPGGKRSVLRNAGG-RDCEEDFLFHSKAAKKRWRQYRIGHL 1633
+T EV + T + WVV+ SV+D+T L HPGGK ++L+ GG +DC ED +FHS+AA++ ++Y+IG L
Sbjct: 18 FTREEVSKHNTTDSLWVVIDNSVFDITPILGQHPGGKCALLKRGGGVKDCAEDMMFHSRAARQDAKKYKIGEL 90
BLAST of mRNA_H-paniculata_contig2476.6720.1 vs. uniprot
Match: A0A0U1UYX8_PANCT (Cytochrome b5 n=1 Tax=Panonychus citri TaxID=50023 RepID=A0A0U1UYX8_PANCT) HSP 1 Score: 71.6 bits (174), Expect = 2.300e-11 Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 2
Query: 1418 YTLCEVRRRKLTGACWVVVQGSVYDVTSALEDHPGGKRSVLRNAGGRDCEEDF--LFHSKAAKKRWRQYRIG--HLVDCVGENGGDGSRTQRISSTECVV 1705
Y L EV + K + W+V+ SVYDVTS LE+HPGG+ +L AGG D EDF + HS A++ +Y+IG H D E + + T+ S + C +
Sbjct: 9 YRLAEVEQHKDRSSTWIVINNSVYDVTSFLEEHPGGEEVLLEKAGG-DSTEDFEDVGHSTDARELMEKYKIGELHEEDRFAEKSKEKTTTEE-SKSSCSI 106
BLAST of mRNA_H-paniculata_contig2476.6720.1 vs. uniprot
Match: A0A836GYK1_9TRYP (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Porcisia hertigi TaxID=2761500 RepID=A0A836GYK1_9TRYP) HSP 1 Score: 73.2 bits (178), Expect = 3.180e-11 Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 2
Query: 1430 EVRRRKLTGACWVVVQGSVYDVTSALEDHPGGKRSVLRNAGG-RDCEEDFLFHSKAAKKRWRQYRIGHLV 1636
E+R + W+V GSVYDVT L HPGG+ ++LR GG +DCE D+ FHS+ A++ W ++G +
Sbjct: 22 EIRIHNTRRSLWIVSGGSVYDVTGMLGSHPGGEAAILRRGGGSKDCEVDYKFHSRYARREWDSRKVGEIT 91
BLAST of mRNA_H-paniculata_contig2476.6720.1 vs. uniprot
Match: A0A0N1IMH0_LEPSE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1IMH0_LEPSE) HSP 1 Score: 72.4 bits (176), Expect = 6.460e-11 Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 2
Query: 1430 EVRRRKLTGACWVVVQGSVYDVTSALEDHPGGKRSVLRNAGG-RDCEEDFLFHSKAAKKRWRQYRIGHLVDCV 1645
EVR + W+V SVYDVT+ L HPGG+ ++LR GG +DCE D+ FHS+ A++ W ++G + V
Sbjct: 25 EVRVHNSRRSLWIVSGNSVYDVTAVLTSHPGGEAAMLRRGGGAKDCEADYTFHSRYARREWDARKVGEVTPVV 97
BLAST of mRNA_H-paniculata_contig2476.6720.1 vs. uniprot
Match: D0EP49_AGATN (Nitrate reductase n=1 Tax=Agarophyton tenuistipitatum TaxID=2510778 RepID=D0EP49_AGATN) HSP 1 Score: 77.4 bits (189), Expect = 1.030e-10 Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 2
Query: 1361 GWASSMPP----SLSARYSRKAGYTLCEVRRRKLTGACWVVVQGSVYDVTSALEDHPGGKRSVLRNAGGRDCEEDFL-FHSKAAKKRWRQYRIGHLV 1636
G ASS PP S + + +T+ +V ++ + W+VV+G VYD T LEDHPGGK S+L NAG +D E+FL HS AKK Y IG LV
Sbjct: 511 GVASSAPPVKSGSAPSLSTMIKSFTMKDVEKQNSEDSAWIVVEGKVYDATPYLEDHPGGKASILMNAG-QDATEEFLAIHSDKAKKMLEDYYIGELV 606
BLAST of mRNA_H-paniculata_contig2476.6720.1 vs. uniprot
Match: A0A498IBS8_MALDO (Cytochrome b5 heme-binding domain-containing protein n=4 Tax=Maleae TaxID=721813 RepID=A0A498IBS8_MALDO) HSP 1 Score: 70.1 bits (170), Expect = 1.630e-10 Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 2
Query: 1418 YTLCEVRRRKLTGACWVVVQGSVYDVTSALEDHPGGKRSVLRNAGGRDCEEDF--LFHSKAAKKRWRQYRIGHL 1633
YT+ E + G CWVV+ G VYDV++ L+DHPGG VL +A GRD EDF HSK A++ + IG L
Sbjct: 8 YTMQEASQHNTKGNCWVVIDGKVYDVSTYLDDHPGGD-DVLLDATGRDATEDFEDAGHSKTAREEMEAFCIGEL 80
BLAST of mRNA_H-paniculata_contig2476.6720.1 vs. uniprot
Match: T1KD35_TETUR (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1KD35_TETUR) HSP 1 Score: 68.9 bits (167), Expect = 1.920e-10 Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 2
Query: 1418 YTLCEVRRRKLTGACWVVVQGSVYDVTSALEDHPGGKRSVLRNAGGRDCEEDF--LFHSKAAKKRWRQYRIGHL 1633
Y L EV + K + W+V+ SVYDVTS LE+HPGG+ +L AGG D EDF + HS A+ +Y+IG L
Sbjct: 8 YRLSEVEQHKDRSSTWIVINNSVYDVTSFLEEHPGGEEVLLEKAGG-DSTEDFEDVGHSTDARTLMEKYKIGEL 80
BLAST of mRNA_H-paniculata_contig2476.6720.1 vs. uniprot
Match: A0A0D1CW43_USTMA (Putative cytochrome b5 n=8 Tax=Ustilaginales TaxID=5267 RepID=A0A0D1CW43_USTMA) HSP 1 Score: 68.2 bits (165), Expect = 1.950e-10 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 2
Query: 1424 LCEVRRRKLTGACWVVVQGSVYDVTSALEDHPGGKRSVLRNAGGRDCEEDFLFHS-KAAKKRWRQYRIGHLVD 1639
L E++ K + WVVV+G VYDVT L+DHPGGK+ +L+N G E + +HS K +K ++Y IG L D
Sbjct: 7 LNELKNHKSEDSAWVVVEGKVYDVTGFLDDHPGGKKILLKNCGKDATEAFWTYHSEKILEKVAQEYHIGELKD 79 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2476.6720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2476.6720.1 >prot_H-paniculata_contig2476.6720.1 ID=prot_H-paniculata_contig2476.6720.1|Name=mRNA_H-paniculata_contig2476.6720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=401bp MGIRAISSVESEHSLCSCVSQPARPGRRRSLHFPADFFDIEIERAHSPVPback to top mRNA from alignment at H-paniculata_contig2476:9419..14334- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2476.6720.1 ID=mRNA_H-paniculata_contig2476.6720.1|Name=mRNA_H-paniculata_contig2476.6720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4916bp|location=Sequence derived from alignment at H-paniculata_contig2476:9419..14334- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2476:9419..14334- >mRNA_H-paniculata_contig2476.6720.1 ID=mRNA_H-paniculata_contig2476.6720.1|Name=mRNA_H-paniculata_contig2476.6720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2406bp|location=Sequence derived from alignment at H-paniculata_contig2476:9419..14334- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |