mRNA_H-paniculata_contig2475.6713.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2475.6713.1 vs. uniprot
Match: D8LNW0_ECTSI (IPPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW0_ECTSI) HSP 1 Score: 310 bits (795), Expect = 7.060e-96 Identity = 168/280 (60.00%), Postives = 185/280 (66.07%), Query Frame = 3
Query: 1074 DHSVRVCVLTWNLAEESPPASDVAFLRRAAEGCDLVGIGVQEIENLKPRRNEGRRTREWRRLLLRTLGKDFIRVGHQAMGAVQLTLFARRALVDRVKVIKLTEVACGVGNVLQNKGGIGAFVRVDRTTFLFIAAHLAAHQDKVEERNADYWRIVSTLEQEIPPAWVTHATRKRAKRLKAEHATTTEAAQSAFATSQSLLHESSSAASKPPSTATSAFVRRDASGREGGDAVRTVITSPPGGVGKSNHPRGPFQDRVDRVFFFGDLNYRVDLSREDIEMGI 1913
D+SV VCVLTWNLAEESPPA D+ FLR+A DLV +GVQEIENLKPRRNEG RTREWRRLL+RTLG+DF+RVGH AMGAVQLTLFARR ++DRVKVIKLTEV CGVGNVLQNKGGIGA+VRVDRTTFLF+AAHLAAHQ KVEERNA YWRI +TL+QEIPPAWVTHA+RKRA RVDRVFFFGDLNYRVDLSRED+E+G+
Sbjct: 44 DNSVEVCVLTWNLAEESPPADDLEFLRQATRETDLVAVGVQEIENLKPRRNEGGRTREWRRLLMRTLGRDFVRVGHHAMGAVQLTLFARREVLDRVKVIKLTEVVCGVGNVLQNKGGIGAYVRVDRTTFLFVAAHLAAHQGKVEERNAGYWRIATTLDQEIPPAWVTHASRKRAXXXXXXX---------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVDRVFFFGDLNYRVDLSREDLELGV 296
BLAST of mRNA_H-paniculata_contig2475.6713.1 vs. uniprot
Match: A0A6H5KIL2_9PHAE (IPPc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL2_9PHAE) HSP 1 Score: 304 bits (779), Expect = 3.600e-91 Identity = 167/280 (59.64%), Postives = 183/280 (65.36%), Query Frame = 3
Query: 1074 DHSVRVCVLTWNLAEESPPASDVAFLRRAAEGCDLVGIGVQEIENLKPRRNEGRRTREWRRLLLRTLGKDFIRVGHQAMGAVQLTLFARRALVDRVKVIKLTEVACGVGNVLQNKGGIGAFVRVDRTTFLFIAAHLAAHQDKVEERNADYWRIVSTLEQEIPPAWVTHATRKRAKRLKAEHATTTEAAQSAFATSQSLLHESSSAASKPPSTATSAFVRRDASGREGGDAVRTVITSPPGGVGKSNHPRGPFQDRVDRVFFFGDLNYRVDLSREDIEMGI 1913
D SV VCVLTWNLAEESPPA D+ FLR A DLV +GVQEIENLKPRRNEG RTREWRRLL+RTLG+DF+RVGH AMGAVQLTLFARR ++DRVKVIKLTEV CGVGNVLQNKGGIGA+VRVDRTTFLF+AAHLAAHQ +EERNA YWRI +TL+QEIPPAWVTHA+RKRA DRVDRVFFFGDLNYRVDLSRED+E+G+
Sbjct: 237 DKSVEVCVLTWNLAEESPPAGDLEFLRHATRETDLVAVGVQEIENLKPRRNEGGRTREWRRLLIRTLGRDFVRVGHHAMGAVQLTLFARREVLDRVKVIKLTEVVCGVGNVLQNKGGIGAYVRVDRTTFLFVAAHLAAHQ-AMEERNAGYWRIATTLDQEIPPAWVTHASRKRAXXXXXXX--------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRVDRVFFFGDLNYRVDLSREDLELGV 489
BLAST of mRNA_H-paniculata_contig2475.6713.1 vs. uniprot
Match: A0A835Z9Y7_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y7_9STRA) HSP 1 Score: 256 bits (654), Expect = 2.040e-75 Identity = 136/282 (48.23%), Postives = 168/282 (59.57%), Query Frame = 3
Query: 1077 HSVRVCVLTWNLAEESPPASDVAFLRRAAEGCDLVGIGVQEIENLKPRRNEGRRTREWRRLLLRTLGKDFIRVGHQAMGAVQLTLFARRALVDRVKVIKLTEVACGVGNVLQNKGGIGAFVRVDRTTFLFIAAHLAAHQDKVEERNADYWRIVSTLEQEIPPAWVTHATRKRAKRLKAEHATTTEAAQSAFATSQSLLHESSSAASKPPSTATSAFVRRDASGREGGDAVRTVITSPPGGVGKSNHPRGPFQDRVDRVFFFGDLNYRVDLSREDIEMGISVA 1922
+SV V V+TWNLAE SP SD+ FL E DL+ +GVQEIENL PRR EG R REWRRL R LGKDF+R+GH ++G++ LT++ +R L R K++K+++V CGVGNVLQNKG + AF+RVD+TTFLFI AHLAAHQ KV ERN DYWRI+ LEQEIPPAW+ A ++R K L T T+A GG+ R F D VDRVFFFGDLNYR+DL R D++ G+ A
Sbjct: 29 NSVNVSVVTWNLAEGSPKLSDLRFLEELGEKSDLICLGVQEIENLTPRRQEGHRCREWRRLQHRVLGKDFVRLGHHSIGSIHLTVYGKRELASRTKLVKMSDVVCGVGNVLQNKGAVAAFLRVDKTTFLFITAHLAAHQTKVAERNGDYWRIIGELEQEIPPAWIKRAAKRRQKAL----------------------------------TGTAAAGAAPERAAHGGE-------------------RSVFLDMVDRVFFFGDLNYRIDLDRLDVQRGLVAA 257
BLAST of mRNA_H-paniculata_contig2475.6713.1 vs. uniprot
Match: K8YV14_NANGC (Inositol polyphosphate 5-phosphatase-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YV14_NANGC) HSP 1 Score: 158 bits (400), Expect = 5.350e-39 Identity = 107/283 (37.81%), Postives = 144/283 (50.88%), Query Frame = 3
Query: 1080 SVRVCVLTWNLAEESPPASDVAFLRRAAE--GCDLVGIGVQEIENLKPRRNEGRRTREWRRLLLRTLGKDFIRVGHQAMGAVQLTLFARRALVDRVKVIKLTEVACGVGNVLQNKGGIGAFVRV-DRTTFLFIAAHLAAHQDKVEERNADYWRIVSTLEQEIPPAWVTHATRKRAKRLKAEHATTTEAAQSAFATSQSLLHESSSAASKPPSTATSAFVRRDASGREGGDAVRTVITSPPGGVGKSNHPRGP----FQDRVDRVFFFGDLNYRVDLSREDIEM 1907
++ V ++TWN+AE+SP SDV + R+AE DL +G QE+ENLKPRR+EG R+REWRRLLL G+ + + +G +QL + A+R L+ + + + EV CGVGN+L NKGG RV T+FLFI AHLAAH +VE+RN D R+++ + QSLL A S P GREG A + + P P P +VDR FF GDLNYR++L REDIE+
Sbjct: 73 NLTVSIVTWNMAEKSPSLSDVVLVARSAEVHRSDLCVVGAQELENLKPRRHEGSRSREWRRLLLHVFGRTHMLLCLTKLGGMQLAVLAKRPLLPYLSPLHVCEVPCGVGNLLHNKGGQAVLFRVATHTSFLFINAHLAAHAHRVEDRNGDVDRVMTEV--------------------------------------QSLL-----AFSLP--------------GREGRRARASKESIPLSSSFPERQPHQPPPSALVKKVDRFFFLGDLNYRLELPREDIEV 298
BLAST of mRNA_H-paniculata_contig2475.6713.1 vs. uniprot
Match: A0A4D9D7G4_9STRA (IPPc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7G4_9STRA) HSP 1 Score: 160 bits (404), Expect = 9.980e-39 Identity = 108/283 (38.16%), Postives = 145/283 (51.24%), Query Frame = 3
Query: 1080 SVRVCVLTWNLAEESPPASDVAFLRRAAE--GCDLVGIGVQEIENLKPRRNEGRRTREWRRLLLRTLGKDFIRVGHQAMGAVQLTLFARRALVDRVKVIKLTEVACGVGNVLQNKGGIGAFVRV-DRTTFLFIAAHLAAHQDKVEERNADYWRIVSTLEQEIPPAWVTHATRKRAKRLKAEHATTTEAAQSAFATSQSLLHESSSAASKPPSTATSAFVRRDASGREGGDAVRTVITSPPGGVGKSNHPRGP----FQDRVDRVFFFGDLNYRVDLSREDIEM 1907
++ V ++TWN+AE+SP SDVA + R+AE DL +G QE+ENLKPRR+EG R+REWRRLLL G+ + + +G +QL + A+R L+ + + + EV CGVGN+L NKGG RV T+FLFI AHLAAH +VE+RN D R+++ + QSLL A S P GREG A + + P P P +VDR FF GDLNYR++L REDIE+
Sbjct: 80 NLTVSIVTWNMAEKSPSLSDVALVARSAEVHRSDLCVVGAQELENLKPRRHEGSRSREWRRLLLHVFGRTHMLLCLTKLGGMQLAVLAKRPLLPYLSPLHVCEVPCGVGNLLHNKGGQAVLFRVATHTSFLFINAHLAAHAHRVEDRNGDVDRVMTEV--------------------------------------QSLL-----AFSLP--------------GREGRRARASKESLPLSSSFPEQQPHQPPPSVLVKKVDRFFFLGDLNYRLELPREDIEV 305
BLAST of mRNA_H-paniculata_contig2475.6713.1 vs. uniprot
Match: A0A7S2YER7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YER7_9STRA) HSP 1 Score: 159 bits (401), Expect = 3.010e-37 Identity = 98/314 (31.21%), Postives = 147/314 (46.82%), Query Frame = 3
Query: 1059 TVDEIDHSVRVCVLTWNLAEESPPASDVAFLRRAAE------GCDLVGIGVQEIENLKPRRNEGRRTREWRRLLLRTLGKDFIRVGHQAMGAVQLTLFARRALVDRVKVIKLTEVACGVGNVLQNKGGIGAFVRVDRTT--------------FLFIAAHLAAHQDKVEERNADYWRIVSTLEQEIPPAWVTHATRKRAKRLKAEHATTTEAAQSAFATSQSLLHESSSAASKPPSTATSAFVRRDASGREGGDAVRTVITSPPGGVGKSNHPRGPFQDRVDRVFFFGDLNYRVDLSREDIEMGISVARRHEGR 1940
T ++ D + + V+TWNLAEESP D AF+++ + G D V I QE EN+KPRR EGRR+RE+RRL+++ LGK+++ + +G +Q LF + ++++++ + +V CG+GNV NKG I AFV+V LF+ AH+AAH E R++D+WRIV+ LE + PP ++ T GG A+ + +DR+FF GDLNYR+DL RE E ++ +R EGR
Sbjct: 389 TCEDEDTDMHISVVTWNLAEESPQEQDAAFIKKFRKCGMDKKGSDFVLISGQECENIKPRRTEGRRSREYRRLMIKMLGKNYVPIAMHMLGGIQFGLFCKCDMLEKLEHVSAADVTCGIGNVFHNKGAIAAFVKVKARNDHAEKGEARSKSVKMLFVTAHMAAHVKHFEARDSDFWRIVTELEAQAPPGFLPRRTED-----------------------------------------------------SGGTALL---------------------NSMDRIFFCGDLNYRLDLPREVAEHTVAEMQRLEGR 628
BLAST of mRNA_H-paniculata_contig2475.6713.1 vs. uniprot
Match: A0A1Z5JN91_FISSO (Inositol polyphosphate 5-phosphatase INPP5B/F n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JN91_FISSO) HSP 1 Score: 159 bits (401), Expect = 6.530e-37 Identity = 96/276 (34.78%), Postives = 140/276 (50.72%), Query Frame = 3
Query: 1095 VLTWNLAEESPPASDVAFLRRAAEGCDLVGIGVQEIENLKPRRNEGRRTREWRRLLLRTLGKDFIRVGHQAMGAVQLTLFARRALVDRVKVIKLTEVACGVGNVLQNKGGIGAFVRVDRTT------FLFIAAHLAAHQDKVEERNADYWRIVSTLEQEIPPAWVTHATRKRAKRLKAEHATTTEAAQSAFATSQSLLHESSSAASKPPSTATSAFVRRDASGREGGDAVRTVITSPPGGVGKSNHPRGPFQDRVDRVFFFGDLNYRVDLSREDIE 1904
++TWNLAEESP + AFL++ G D+V I QE EN+KPRR EGRR+RE+RRL+++ LG D++ V +G +Q LF +R+++ V+++ + +V CG+GNV NKG I AFV + + LF+ AH+AAH E RN+D+WRIVS LE+++P ++ RA ++ T + LL+ VDR+FF GDLNYR+DL RE +E
Sbjct: 796 IVTWNLAEESPSEEEAAFLKQF-RGNDIVLISGQECENIKPRRAEGRRSREFRRLMIKYLGSDYVPVALHMLGGIQFGLFCKRSMLKDVQLVSVADVTCGIGNVFHNKGAIAAFVTLQNKSNAQSLRLLFVTAHMAAHVKNTEARNSDFWRIVSELEEQVPAQFLA----PRAPEVEC--------------TGEYLLNS------------------------------------------------------VDRIFFCGDLNYRIDLPREIVE 998
BLAST of mRNA_H-paniculata_contig2475.6713.1 vs. uniprot
Match: A0A1Z5JZ17_FISSO (Inositol polyphosphate 5-phosphatase INPP5B/F n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZ17_FISSO) HSP 1 Score: 158 bits (400), Expect = 8.430e-37 Identity = 94/283 (33.22%), Postives = 138/283 (48.76%), Query Frame = 3
Query: 1095 VLTWNLAEESPPASDVAFLRRAAEGCDLVGIGVQEIENLKPRRNEGRRTREWRRLLLRTLGKDFIRVGHQAMGAVQLTLFARRALVDRVKVIKLTEVACGVGNVLQNKGGIGAFVRVDRTT------FLFIAAHLAAHQDKVEERNADYWRIVSTLEQEIPPAWVTHATRKRAKRLKAEHATTTEAAQSAFATSQSLLHESSSAASKPPSTATSAFVRRDASGREGGDAVRTVITSPPGGVGKSNHPRGPFQDRVDRVFFFGDLNYRVDLSREDIEMGISVAR 1925
++TWNLAEESP + AFL++ G D+V I QE EN+KPRR EGRR+RE+RRL+++ LG D++ + +G +Q LF +R+++ V+++ + +V CG+GNV NKG I AFV + + LF+ AH+AAH E RN+D+WRIVS LE+++P ++ A P T ++ VDR+FF GDLNYR+DL RE +E + R
Sbjct: 753 IVTWNLAEESPSEEEAAFLKQF-RGNDIVLISGQECENIKPRRAEGRRSREFRRLMIKYLGSDYVPIALHMLGGIQFGLFCKRSMLKDVQLVSVADVTCGIGNVFHNKGAIAAFVTLQNKSNAQSLRLLFVTAHMAAHVKNTEARNSDFWRIVSELEEQVPAQFL--------------------------------------APRAPDVECTGEYLLNS----------------------------------VDRIFFCGDLNYRIDLPREIVEHTVRKGR 962
BLAST of mRNA_H-paniculata_contig2475.6713.1 vs. uniprot
Match: A0A448ZFD9_9STRA (IPPc domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFD9_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.710e-36 Identity = 99/302 (32.78%), Postives = 146/302 (48.34%), Query Frame = 3
Query: 1059 TVDEIDHSVRVCVLTWNLAEESPPASDVAFLRR-------AAEGCDLVGIGVQEIENLKPRRNEGRRTREWRRLLLRTLGKDFIRVGHQAMGAVQLTLFARRALVDRVKVIKLTEVACGVGNVLQNKGGIGAFVRV----DRTT-----------FLFIAAHLAAHQDKVEERNADYWRIVSTLEQEIPPAWVTHATRKRAKRLKAEHATTTEAAQSAFATSQSLLHESSSAASKPPSTATSAFVRRDASGREGGDAVRTVITSPPGGVGKSNHPRGPFQ-DRVDRVFFFGDLNYRVDLSRE 1895
T+ + D V ++TWNLAE+SP D AF+R+ +G D V I QE EN+KPRR+EGRR+RE+RRL+++ LGK+++ + +G +Q LFA+R++++ ++ + + +V CG+GNV NKG I AFV+V D+ + +F+ AHLAAH + R++D+WRI S LE + P ++ RKR + +P G F D VDRVFF GDLNYR+DL RE
Sbjct: 897 TLGDKDSDTVVSIVTWNLAEDSPSEEDAAFIRKFRKNGVVEGQGSDFVLISGQECENIKPRRSEGRRSREYRRLMIKMLGKEYVPLALHLLGGIQFGLFAKRSILEEIEDVCVADVTCGIGNVFHNKGAIAAFVKVKARNDKQSSTDERRSKSLRMVFVTAHLAAHVKNADARDSDFWRISSELEAQAPEGFLP---RKR----------------------------------------------------------------------EGENPSGSFLFDSVDRVFFCGDLNYRLDLPRE 1125
BLAST of mRNA_H-paniculata_contig2475.6713.1 vs. uniprot
Match: B7FTS6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTS6_PHATC) HSP 1 Score: 155 bits (393), Expect = 5.800e-36 Identity = 97/301 (32.23%), Postives = 146/301 (48.50%), Query Frame = 3
Query: 1059 TVDEIDHSVRVCVLTWNLAEESPPASDVAFLRR------AAEGCDLVGIGVQEIENLKPRRNEGRRTREWRRLLLRTLGKDFIRVGHQAMGAVQLTLFARRALVDRVKVIKLTEVACGVGNVLQNKGGIGAFVRV---------------DRTT-FLFIAAHLAAHQDKVEERNADYWRIVSTLEQEIPPAWVTHATRKRAKRLKAEHATTTEAAQSAFATSQSLLHESSSAASKPPSTATSAFVRRDASGREGGDAVRTVITSPPGGVGKSNHPRGPFQDRVDRVFFFGDLNYRVDLSRE 1895
++ + + + V ++TWNLAEESP D +F+RR + D V I QE EN+KPRR EG R+RE+RRL+++ LGK ++ + ++G +Q LF +R+++ V+ I + +V CG+GNV NKG I AFV++ D++ +F AH+AAH E R++D+WRIVS LE + PP +++ S + ESS R+ SG + + +DR+FF GDLNYRVDL RE
Sbjct: 610 SLQDHEDDINVSIVTWNLAEESPSEEDASFIRRFRRRNDVQKSSDFVLISGQECENIKPRRTEGHRSREFRRLMIKMLGKQYVPIALHSLGGIQFGLFCKRSILSEVETISVADVTCGIGNVFHNKGAIAAFVQIKAKQCSEGEAIGPNRDKSVRMMFATAHMAAHVKNTEARDSDFWRIVSELEAQAPPRFLS-----------------------------SNIVESSK--------------ERECSGSK-------------------------LLESMDRIFFCGDLNYRVDLPRE 842 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2475.6713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2475.6713.1 >prot_H-paniculata_contig2475.6713.1 ID=prot_H-paniculata_contig2475.6713.1|Name=mRNA_H-paniculata_contig2475.6713.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=555bp MHHASNSRLQTLRYTTADRETSHRGQRMWNTSAGRAAVTCTCHIALALAAback to top mRNA from alignment at H-paniculata_contig2475:9888..13385+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2475.6713.1 ID=mRNA_H-paniculata_contig2475.6713.1|Name=mRNA_H-paniculata_contig2475.6713.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3498bp|location=Sequence derived from alignment at H-paniculata_contig2475:9888..13385+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2475:9888..13385+ >mRNA_H-paniculata_contig2475.6713.1 ID=mRNA_H-paniculata_contig2475.6713.1|Name=mRNA_H-paniculata_contig2475.6713.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3330bp|location=Sequence derived from alignment at H-paniculata_contig2475:9888..13385+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |