prot_H-paniculata_contig24729.6707.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24729.6707.1
Unique Nameprot_H-paniculata_contig24729.6707.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length36
Homology
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BLAST of mRNA_H-paniculata_contig24729.6707.1 vs. uniprot
Match: A0A6H5KKY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY4_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 2.870e-6
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:    1 MTFNPTDKDVFAVCSSDLSLDLWRYTRHPNHELEKL 36
            M FNP D  +FAVCS+DLS+DLWRY R+   ELEK+
Sbjct:  633 MAFNPVDPGLFAVCSADLSVDLWRYGRN-KQELEKV 667
[Close]
BLAST of mRNA_H-paniculata_contig24729.6707.1 vs. uniprot
Match: D8LT10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT10_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 2.890e-6
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:    1 MTFNPTDKDVFAVCSSDLSLDLWRYTRHPNHELEKL 36
            M FNP D  +FAVCS+DLS+DLWRY R+   ELEK+
Sbjct:  474 MAFNPVDPGLFAVCSADLSVDLWRYGRN-KQELEKV 508
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24729.6707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKY4_9PHAE2.870e-663.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT10_ECTSI2.890e-663.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24729contigH-paniculata_contig24729:2857..2964 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24729.6707.1mRNA_H-paniculata_contig24729.6707.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24729 2857..2976 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24729.6707.1 ID=prot_H-paniculata_contig24729.6707.1|Name=mRNA_H-paniculata_contig24729.6707.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=36bp
MTFNPTDKDVFAVCSSDLSLDLWRYTRHPNHELEKL
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