mRNA_H-paniculata_contig247.6697.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig247.6697.1 vs. uniprot
Match: A0A835Z565_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z565_9STRA) HSP 1 Score: 1639 bits (4245), Expect = 0.000e+0 Identity = 815/1155 (70.56%), Postives = 948/1155 (82.08%), Query Frame = 2
Query: 347 KMAAMAESEEEEEDGHEQVRGVKEKWKLLPHFLKLRGLMRQHIDSYDYFVNVDISKIVQAKGNREVLSDVDPKFFLQYTKITVGTPCIDEDDYTVKTITPFQCRLRDCTYSAPLWVNVRYTRGRQIVNKSNINIGRIPVMLLSCKCVLTGKSESELADMKECPYDPGGYFVVKGVEKVILMQEQLSKNRVIIEFDAKKNISAAITSSTHERKSRCNIHVKNGKVYMKHNSLGDDVPIVVILRAMGAMSDQEIVQLVGSEPEIVNAFMASLEEAQAVGVYTEKQALSYIGHKMRAPPKAGARVRQQPTFRKPQSPEDEARDILCGVILSHVPVVGYDFRAKIIYTAHIVRRVLMTVIDPTTVDDKDYYGNKRLELAGQLISLLFEDLFKRFNSELKRNADMVLSKPNRAAAFDIGKFLEGSTTITHGFTHAISTGNWVLKRFKVDRQGVTQVLSRLSFISSLGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGLNSSLVFLNGSIVGTTGHPSVLASKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVEHGRTRLTQTHMDQMALGVLSLQDLIKQGVVEYVDVNEENNCLVALTAVDLSLGHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTTALNMHERLDGLLYALVHPQKPMVTTRVLDLVHFDQVPGGQNASIAVMSYSGYDIEDAVVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKV---RASEFPRGSEASDPRWKRYEQLDEDGICRVGSECKPGTIMVNKHSPASTS-GIYGPGQSDFVSAPMSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMSDIRLPYACKLLFQELQSMNIVPRLKLEDF 3799
K A ES +GHEQV+GVK+KWKLLPHFL++RGLMRQHIDS++YF +I KIV AK N VLSD +FL+YT + + P + + V+ ITP++CRLRDCTY +P+ VNVRYT+G I+ K+ I IG +P+ML S C LTGKSE +LA MKECPYDPGGYF+VKGVEKVILMQEQLSKNRVIIE D K N+SA I SSTHERKSRC IHVK+GKVY+ HN+LGDDVPIVV ++AMG SDQEIVQLVGSEP +V+AF S+EEA AVGV T+KQAL YIG KMR P KA +Q P EDEAR++L V+LSH+P Y+FRAK +YTAHIVRRVL TV+DP+++DDKDYYGNKRLE AGQLISLLFEDLFKRFN +LKR AD L+K N A +DI L GS IT GF HAISTGNWV+KRFK+DRQGVTQVLSRLS+IS LGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSD+E P++RLC D+GVEDV LSG E+N ++ LVF+NG+I+G P + ++RFLRR+GMVGEFVSVYLH V+RAVYIASDGGRVCRPLLVVE+G+T LT+ HM Q+A GV L+DL++ GVVEYVDVNEENNCL+AL+ DL+ HTHLE+DPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQA+GT ALN +ER+DGLLY LV+PQKPM TRV+DL+HFD+VP GQN+ IAVMSYSGYDIEDA VLN+GS+DRGFGRCMVFRKHQV ++ +P+GT D I G A +P+G +D WK+Y+ LD+DGI VG++ + T+++NK +P T + A +SYK + SYVDKV++ +NE E+ K+L+RQ RRPEVGDKFSSRHGQKGVCGIIVPQ DMPF++ GICPDLIMNPHGFPSRMTVGKM+EL+AGKAGVLHGHQAYGTAFGEEFG+AD+V CQALV+RG+SY GKD+L SG GEP++NYIFAGPVFYQKLKHMVMDKMHARARGPRA LTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTA VC+GCGLLGY GWCQ CR P+ MS I +PYACKLLFQELQSMNIVPRL+L+++
Sbjct: 32 KFAEGEESPPSMRNGHEQVKGVKDKWKLLPHFLQMRGLMRQHIDSFNYFCTTEIKKIVAAKSNCVVLSDSKADWFLEYTDVYIEEPSMFNEMGNVRDITPYECRLRDCTYQSPIKVNVRYTKGNNIIRKNGIVIGYLPIMLRSAMCHLTGKSEDQLAQMKECPYDPGGYFIVKGVEKVILMQEQLSKNRVIIELDNKGNVSANIQSSTHERKSRCAIHVKHGKVYLHHNTLGDDVPIVVFMKAMGVESDQEIVQLVGSEPHLVDAFGESIEEALAVGVMTQKQALKYIGRKMRNP-KASLNRKQYKARNIPA--EDEAREMLSSVVLSHIPCPNYNFRAKCVYTAHIVRRVLTTVLDPSSLDDKDYYGNKRLESAGQLISLLFEDLFKRFNGDLKRYADTCLAKQNHATPWDISGMLAGSMNITQGFIHAISTGNWVVKRFKMDRQGVTQVLSRLSYISCLGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSDEEPEPLVRLCMDMGVEDVTALSGAEINAPDTYLVFMNGAIIGAHARPELFVRRLRFLRRQGMVGEFVSVYLHDVQRAVYIASDGGRVCRPLLVVENGQTLLTERHMAQLASGVRGLKDLLRIGVVEYVDVNEENNCLIALSDADLTERHTHLEVDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQAIGTIALNQYERIDGLLYTLVYPQKPMCKTRVIDLIHFDEVPAGQNSIIAVMSYSGYDIEDASVLNKGSIDRGFGRCMVFRKHQVALKTHPSGTSDSINGPPDPNNADLYPKGE--NDRGWKKYKALDKDGIAYVGAKLEKDTVIINKMTPVGTDISADRAAATKMREASLSYKTSSPSYVDKVMIASNEVENQFFKVLVRQVRRPEVGDKFSSRHGQKGVCGIIVPQADMPFSEMGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLHGHQAYGTAFGEEFGNADKVTDICQALVDRGFSYCGKDILMSGINGEPVLNYIFAGPVFYQKLKHMVMDKMHARARGPRATLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTAYVCEGCGLLGYQGWCQGCRRPDSMSSISVPYACKLLFQELQSMNIVPRLRLQEY 1181
BLAST of mRNA_H-paniculata_contig247.6697.1 vs. uniprot
Match: I2CNY0_NANGC (DNA-directed RNA polymerase subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CNY0_NANGC) HSP 1 Score: 1574 bits (4076), Expect = 0.000e+0 Identity = 784/1171 (66.95%), Postives = 941/1171 (80.36%), Query Frame = 2
Query: 368 SEEEEEDGHEQVRGVKEKWKLLPHFLKLRGLMRQHIDSYDYFVNVDISKIVQAKGNREVLSDVDPKFFLQYTKITVGTPCIDEDDYTVKTITPFQCRLRDCTYSAPLWVNVRYTRGRQIVNKSNINIGRIPVMLLSCKCVLTGKSESELADMKECPYDPGGYFVVKGVEKVILMQEQLSKNRVIIEFDAKKNISAAITSSTHERKSRCNIHVKNG-KVYMKHNSLGDDVPIVVILRAMGAMSDQEIVQLVGSEPEIVNAFMASLEEAQAVGVYTEKQALSYIGHKMR------APPKAGARVRQQPTFRKPQSPEDEARDILCGVILSHVPVVGYDFRAKIIYTAHIVRRVLMTVIDPTTVDDKDYYGNKRLELAGQLISLLFEDLFKRFNSELKRNADMVLSKPNRAAAFDIGKFLEGSTTITHGFTHAISTGNWVLKRFKVDRQGVTQVLSRLSFISSLGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGLNSSLVFLNGSIVGTTGHPSVLASKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVEHGRTRLTQTHMDQMALGVLSLQDLIKQGVVEYVDVNEENNCLVALTAVDLSLGHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTTALNMHERLDGLLYALVHPQKPMVTTRVLDLVHFDQVPGGQNASIAVMSYSGYDIEDAVVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGK---VRASEFPRGSEAS--------------DPRWKRYEQLDEDGICRVGSECKPGTIMVNKHSPASTSGIY---GPGQSDFVSAPMSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMSDIRLPYACKLLFQELQSMNIVPRLKLEDF 3799
+++ +ED + V V +KWKLLPHFL+LRGLMRQHIDS+D+FVN +I IV A NRE+ S+ DPKF+L+YT + VG P +D+D Y +TPFQCRLRDCTYSAP+ V+VRYTRGRQIV K + IGRIP+ML SCKC+L G+SE+ELA+ KECPYDPGGYF+VKGVE+VILMQEQLSKNRVIIE D K N+SA+ITSSTH+RK R NI VKNG KVY+K+N LGDDVPIVV+L+AMG SDQEIV +VG PE+++AF SLEE +G+ T+ QAL YIG K+R P +G +R+ SPE+EAR++L VIL+HVPV+ +DFR K I+ H++RRVL+T D + +DDKDYYGNKRLELAGQL+SLLFEDLFKR N +LK+ AD LSKPNR +FD+ K + + TIT+GF AI+TGNW L+RF++DRQGVTQVL+RLS+IS LGMMTR++SQF+K RKVSGPR+LQPSQWGM+CPADTPEGE+CGLVKNLALLAHVT+D+E+ P+ +LC+DLG+EDV LSG E+N ++ LVFLNG IVG P +R LRRKG+V EFVSV LH V+RA+YIA+DGGRVCRPLLV E G RLT M Q++ G+L+L +LI+ GVVEYVDVNEENNCL+AL L++ HTH+EIDPLT+LGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGT ALN +ERLD LLYA+V+PQKP+VTTR LDLV+F+++PGGQNA +AVMSYSGYDIEDAVVLN+ SLDRGFGRC++ RKHQ +RKY NG D + G A G E S DPR +R+E LD+DGIC+VG G++M+NK SP S + + G + F P+SYK PA S+VD+V++T+NE D L+K+ +RQ RRPEVGDKFSSRHGQKGVCGIIV QEDMPF D GICPDLIMNPHGFPSRMTVGK++E VAGKA V+ G QAYGTAFGE+FGSADRV C ALVE G+SYVGK+++TSGT GEPL+ YIF GPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS+L+ ERLMISSDAFTA VC+ CGLLGY+GWCQ+CRS E+M+DIRLPYACKLLFQELQSMN++P+LKL +F
Sbjct: 31 ADQSQEDVSKPVTDVADKWKLLPHFLQLRGLMRQHIDSFDFFVNREIKDIVNAASNRELRSEADPKFWLRYTDVHVGEPSVDDDAYVSSRVTPFQCRLRDCTYSAPITVDVRYTRGRQIVVKRGVMIGRIPIMLRSCKCILAGRSEAELAEKKECPYDPGGYFIVKGVERVILMQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIRNTTQNRGPGPSGMGFA---FYRRASSPEEEAREVLASVILNHVPVINFDFRTKCIFVCHVIRRVLLTHRDRSQLDDKDYYGNKRLELAGQLLSLLFEDLFKRLNVQLKKQADQGLSKPNRTQSFDVIKCIR-TDTITNGFIQAIATGNWKLQRFRMDRQGVTQVLTRLSYISCLGMMTRINSQFEKTRKVSGPRSLQPSQWGMICPADTPEGEACGLVKNLALLAHVTTDEESEPIRKLCFDLGIEDVTLLSGAEINASSNYLVFLNGLIVGCHSRPLRFVRLLRLLRRKGLVAEFVSVCLHEVQRAIYIATDGGRVCRPLLVCEKGVPRLTNMMMRQLSSGLLTLAELIRCGVVEYVDVNEENNCLIALAQTQLTVKHTHMEIDPLTVLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNELPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197
BLAST of mRNA_H-paniculata_contig247.6697.1 vs. uniprot
Match: A0A6U4JF41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JF41_9STRA) HSP 1 Score: 1541 bits (3990), Expect = 0.000e+0 Identity = 759/1133 (66.99%), Postives = 928/1133 (81.91%), Query Frame = 2
Query: 401 VRGVKEKWKLLPHFLKLRGLMRQHIDSYDYFVNVDISKIVQAKGNREVLSDVDPKFFLQYTKITVGTPCIDEDDYTVKTITPFQCRLRDCTYSAPLWVNVRYTRGRQIVNKSNINIGRIPVMLLSCKCVLTGKSESELADMKECPYDPGGYFVVKGVEKVILMQEQLSKNRVIIEFDAKKNISAAITSSTHERKSRCNIHVKNGKVYMKHNSLGDDVPIVVILRAMGAMSDQEIVQLVGSEPEIVNAFMASLEEAQAVGVYTEKQALSYIGHKMRAPPKAGARVRQQPTFRKPQSPEDEARDILCGVILSHVPVVGYDFRAKIIYTAHIVRRVLMTVIDPTTVDDKDYYGNKRLELAGQLISLLFEDLFKRFNSELKRNADMVLSKPNRAAAFDIGKFLEGSTTITHGFTHAISTGNWVLKRFKVDRQGVTQVLSRLSFISSLGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGLNSSLVFLNGSIVGTTGHPSVLASKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVEHGRTRLTQTHMDQMALGVLSLQDLIKQGVVEYVDVNEENNCLVALTAVDLSLGHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTTALNMHERLDGLLYALVHPQKPMVTTRVLDLVHFDQVPGGQNASIAVMSYSGYDIEDAVVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGSEASDPRWKRYEQLDEDGICRVGSECKPGTIMVNKHSPASTSG---IYGPGQSDFVSAPMSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMSDIRLPYACKLLFQELQSMNIVPRLKL 3790
V+ V+EKW+LLPHFLKLRGL+ QHI+S++YFVNV+I KIV A+ N EV S+ DPKF+L+YT + VG P +D+ ++ +ITPF+CRLRDCTYSA ++V+VRYTR +IV K I IGRIP+ML SCKC+L GKSE+ELA M+ECP+DPGGYFVVKGVEKVI M EQL+KNRVIIE D K A+I SSTHERKSR I VK GKV++KHN+LGDDVPI+V+L+AMG SDQEIVQLVG E ++ + F S+E+ A+G++T++QAL YIG K+R+ K+ P R+ S EDEAR++L V+L+HVP+ G+DFR K +Y +VRRVL D + +DD+DYYGNKRLELAGQL+SLLFEDLFKR N++LKR+AD VLSK NR FDI K + + T+T GF HA+STGNWVL+RF++DR GVTQVLSRLS+IS+LGMMTR++S+F+K RKVSGPRALQPSQWGMLCPADTPEGE+CGLVKNLALLAHVT+D++ P++RLC+DLGVEDV+ +SG E+N + LV +NG I+G P LA ++RFLRR+G VGEFVS+YLHS +RAVYIASDGGRVCRPLLVVE GR RLT H+ +++G+ +L DL+ GVVEYVDVNEENNC +AL +L+ HTHLEIDPLT++GVVAGLIP+PHHNQSPRNTYQCAMGKQAMGT A+N +ER+D LLYA+V+PQKPMVTTRVLDL++F+QVPGGQNA +AVMSYSGYDIEDAVV+N+GS+DRG+GRC+V +K Q IR+Y NG+ D+ VG ++ R +D R++++ LDEDG+ VG + +PG I++NK SP TS + G +++ P+++K+ A VDKV++T+NENE +LIK+ LRQ RRPEVGDKFSSRHGQKGVCGIIVPQEDMPF + GICPDLIMNPHGFPSRMTVGKM+EL+ GKAGVL G QAYGTAFGE+FG+ADRV + LV G+SY GKD+LTSGT GE + +YIF GPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LIMERLM+SSD FTA VC+ CGLL GWCQNCRS E ++D+RLPYACKLLFQELQSMNI+PRL+L
Sbjct: 16 VKEVREKWRLLPHFLKLRGLITQHIESFNYFVNVEIKKIVAAQSNFEVRSEQDPKFYLRYTNVYVGEPTVDDPNFVESSITPFECRLRDCTYSAMIYVDVRYTRNNKIVVKQKIPIGRIPIMLRSCKCLLAGKSEAELAKMQECPFDPGGYFVVKGVEKVINMHEQLTKNRVIIETDRKGQTCASIISSTHERKSRAYIFVKAGKVFLKHNTLGDDVPILVVLKAMGLESDQEIVQLVGPETDMQHLFAPSMEDPYALGIFTQQQALKYIGEKIRSSVKSFRG--SLPVNRRNISVEDEAREVLAHVVLNHVPIAGFDFRRKYMYICQLVRRVLKADKDRSQLDDRDYYGNKRLELAGQLLSLLFEDLFKRMNADLKRHADSVLSKANRTKPFDIIKNIR-TDTLTQGFVHALSTGNWVLRRFRMDRAGVTQVLSRLSYISALGMMTRLNSEFEKTRKVSGPRALQPSQWGMLCPADTPEGEACGLVKNLALLAHVTNDEDAAPIIRLCFDLGVEDVSYVSGAELNRQDVYLVIVNGLIIGIHPDPQDLARRLRFLRRRGCVGEFVSIYLHSGKRAVYIASDGGRVCRPLLVVEGGRLRLTTNHIRHLSMGLGTLPDLLADGVVEYVDVNEENNCFIALKEEELTPSHTHLEIDPLTIMGVVAGLIPFPHHNQSPRNTYQCAMGKQAMGTVAMNQYERIDTLLYAMVYPQKPMVTTRVLDLINFNQVPGGQNACVAVMSYSGYDIEDAVVINKGSIDRGYGRCLVLKKAQASIRRYANGSLDRTVGPPPMTDESR---KNDKRYRKFLALDEDGLPHVGEKVEPGQILINKESPLRTSDPGILEGGSVTEYKPTPVTWKSSASVNVDKVMITSNENEQFLIKVNLRQCRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFNNDGICPDLIMNPHGFPSRMTVGKMIELLTGKAGVLRGRQAYGTAFGEDFGNADRVQFASEELVRHGFSYYGKDILTSGTSGEQICSYIFMGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASNLIMERLMLSSDQFTATVCEKCGLLQRPGWCQNCRSDEAIADVRLPYACKLLFQELQSMNIIPRLRL 1142
BLAST of mRNA_H-paniculata_contig247.6697.1 vs. uniprot
Match: A0A7S2WH87_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WH87_9STRA) HSP 1 Score: 1534 bits (3972), Expect = 0.000e+0 Identity = 758/1158 (65.46%), Postives = 924/1158 (79.79%), Query Frame = 2
Query: 380 EEDGHEQ--VRGVKEKWKLLPHFLKLRGLMRQHIDSYDYFVNVDISKIVQAKGNREVLSDVDPKFFLQYTKITVGTPCIDEDDYTVKTITPFQCRLRDCTYSAPLWVNVRYTRGRQIVNKSNINIGRIPVMLLSCKCVLTGKSESELADMKECPYDPGGYFVVKGVEKVILMQEQLSKNRVIIEFDAKKNISAAITSSTHERKSRCNIHVKNGKVYMKHNSLGDDVPIVVILRAMGAMSDQEIVQLVGSEPEIVNAFMASLEEAQAVGVYTEKQALSYIGHKMRAPPKAGARVRQQPTFRKPQSPEDEARDILCGVILSHVPVVGYDFRAKIIYTAHIVRRVLMTVIDPTTVDDKDYYGNKRLELAGQLISLLFEDLFKRFNSELKRNADMVLSKPNRAAAFDIGKFLEGSTTITHGFTHAISTGNWVLKRFKVDRQGVTQVLSRLSFISSLGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGLNSSLVFLNGSIVGTTGHPSVLASKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVEHGRTRLTQTHMDQMALGVLSLQDLIKQGVVEYVDVNEENNCLVALTAVDLSLGHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTTALNMHERLDGLLYALVHPQKPMVTTRVLDLVHFDQVPGGQNASIAVMSYSGYDIEDAVVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGSEASDPRWKRYEQLDEDGICRVGSECKPGTIMVNK-----------HSPASTSGIYGPGQSDFVSAPMSYKAPAES--YVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSG----WCQNCRSPEKMSDIRLPYACKLLFQELQSMNIVPRLKLED 3796
E DG E V V+EKWKLLPHFL +RGLM QHIDS+DYFVNVDI IV A NREV SDVDP+++L+YT ++VG P I +D + TPF+CRLRDCTY AP+ V++++TRG QIVN S + IGRIP+ML SCKCVL+ +S +ELA +KECP+DPGGYF++KGVEKVILMQEQLSKNRVIIE D+K + +A ITSSTHERKSRC+I VK G+VY+KHN+LG+D+PI ++ +AMG SDQEIVQ+VGSEPE F SLEE + + T+KQAL+YIG+K+RA + G Q+ S EDEAR+IL V+LSHVP+ Y+FR K IY HI+RRVL DP +DDKDY GNKRLELAGQL++LLFED FK+ NSE+KR AD+ L K NR + FD+ K L + IT GF HAISTGNWVLKRF++DR G+TQVLSRLS++S+LGMMTR+ SQF+K RK SGPRALQPSQWGMLCPADTPEGE+CGLVKNLALLAHVTSD++ P+ RLC+DLGVEDV L+G E++ + LVFLNG IVG+ P + +R LRR+G VGEFVSVYLHSV+RAVY+ASDGGRVCRPLLVV++G+ L Q HM Q+A G+ +L+DL+++ +VEY+DVNEENNCL+AL+ L+ HTH+EIDPLT++GVV+GLIP+PHHNQSPRNTYQCAMGKQAMGT A+N +E ++ L+Y+LV+P KPMV TRVLDL++FD+VPGGQNA++AVMSYS YDIEDA++LN+ SLDRGFGRC+V RKHQ +R+YPNG D + G EF RG + D RW+RY +LD+DG+C VG + +PG +MVNK H P + G + AP+SYK + YVDKV++T NE E LIK+L+RQ RRPE+GDKFSSRHGQKGVCG+IV QE+MPF+D GICPDLIMNPHGFPSRMTVGK++ELV GKAG+L+G Q YGTAFGE+FG+ADRV C + LV+RG+SYV KD LTSG GEP+ YIF GPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCL+GYG++ALI ERLM SSDAF+A+VC+ CG+LGY G WCQNCRS M+DI+LPYACKLLFQELQSMNI+P+L L++
Sbjct: 8 EVDGGEDAPVAEVREKWKLLPHFLAMRGLMTQHIDSFDYFVNVDIKNIVNAASNREVRSDVDPRWWLRYTNVSVGEPEIFDDAHQRTPATPFECRLRDCTYYAPIIVSIKFTRGNQIVNMSGVPIGRIPIMLRSCKCVLSRQSHAELAALKECPFDPGGYFIIKGVEKVILMQEQLSKNRVIIEVDSKGHTAATITSSTHERKSRCSIFVKAGRVYLKHNTLGEDMPIAIVFKAMGIESDQEIVQMVGSEPETPAQFALSLEEPVVLQILTQKQALTYIGNKIRANQRPGMNHAQK-------SVEDEAREILASVVLSHVPMRAYNFRPKAIYMGHIIRRVLSADKDPELLDDKDYCGNKRLELAGQLLALLFEDKFKQLNSEIKRQADLNLHKANRISPFDVSKLLRPDSCITQGFIHAISTGNWVLKRFRMDRAGITQVLSRLSYVSALGMMTRITSQFEKTRKTSGPRALQPSQWGMLCPADTPEGETCGLVKNLALLAHVTSDEDVTPLRRLCFDLGVEDVELLTGEEIHSTQNYLVFLNGLIVGSHSRPRLFVDMLRALRRRGRVGEFVSVYLHSVQRAVYVASDGGRVCRPLLVVKNGQPMLRQIHMQQLAAGLRTLKDLMREEIVEYIDVNEENNCLIALSDRMLTPEHTHMEIDPLTIMGVVSGLIPFPHHNQSPRNTYQCAMGKQAMGTVAMNQYELMNSLIYSLVYPHKPMVKTRVLDLINFDKVPGGQNATLAVMSYSAYDIEDAIILNKASLDRGFGRCLVLRKHQTSLRRYPNGATDHLKGPPNPEEFHRGRQ--DTRWQRYAKLDQDGLCEVGEKLEPGQVMVNKVMPTNVNDNLDHPPTMGGAVMGAEKP----APLSYKGSVDHHVYVDKVLMTRNETEHCLIKVLVRQCRRPELGDKFSSRHGQKGVCGLIVNQENMPFSDFGICPDLIMNPHGFPSRMTVGKIIELVVGKAGILNGLQGYGTAFGEDFGNADRVVECSKELVKRGFSYVAKDYLTSGITGEPMKAYIFMGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLVGYGSAALISERLMTSSDAFSAHVCRKCGILGYLGERGMWCQNCRSSTAMTDIKLPYACKLLFQELQSMNIIPKLTLKE 1152
BLAST of mRNA_H-paniculata_contig247.6697.1 vs. uniprot
Match: K3X1L2_GLOUD (DNA-directed RNA polymerase subunit beta n=32 Tax=Oomycota TaxID=4762 RepID=K3X1L2_GLOUD) HSP 1 Score: 1502 bits (3889), Expect = 0.000e+0 Identity = 748/1148 (65.16%), Postives = 905/1148 (78.83%), Query Frame = 2
Query: 401 VRGVKEKWKLLPHFLKLRGLMRQHIDSYDYFVNVDISKIVQAKGNREVLSDVDPKFFLQYTKITVGTPCIDEDDYTVKTITPFQCRLRDCTYSAPLWVNVRYTRGRQIVNKSNINIGRIPVMLLSCKCVLTGKSESELADMKECPYDPGGYFVVKGVEKVILMQEQLSKNRVIIEFDAKKNISAAITSSTHERKSRCNIHVKNGKVYMKHNSLGDDVPIVVILRAMGAMSDQEIVQLVGSEPEIVNAFMASLEEAQAVGVYTEKQALSYIGHKMRAPPKAGARVRQQ------PTFRKPQSPEDEARDILCGVILSHVPVVGYDFRAKIIYTAHIVRRVLMTVIDPTTVDDKDYYGNKRLELAGQLISLLFEDLFKRFNSELKRNADMVLSKPNRAAAFDIGKFLEGSTTITHGFTHAISTGNWVLKRFKVDRQGVTQVLSRLSFISSLGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGLNSSLVFLNGSIVGTTGHPSVLASKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVEH--GRTRLTQTHMDQMALGVLSLQDLIKQGVVEYVDVNEENNCLVALTAVDLSLGHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTTALNMHERLDGLLYALVHPQKPMVTTRVLDLVHFDQVPGGQNASIAVMSYSGYDIEDAVVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVR----ASEFPRGSEASDPRWKRYEQLDEDGICRVGSECKPGTIMVNKHSPAS-TSGIYGPGQSD--FVSAPMSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMSDIRLPYACKLLFQELQSMNIVPRLKLEDF 3799
V VK+KWKLLP+FL+LRGL++QHIDS++YF NVD+ IV+AK N V SD DPKFFLQYT I +G+P IDE+ + ++TP QCRLRD TY+AP++V+VRY RG +IV + + IGRIP+ML S CVLT K E+ELA +KECPYDPGGYF+VKGVEKV+L+ EQLSKNRVIIE DAK+N+ A+ITSSTHERKSR NI + +VY+K NS G D+PIV++ R MG SDQEIV L+GSEP++ +A AS EEA + V+T+ QAL YIG KM A K GA + + +S D AR L ++L+HVP Y+FR K IY AHIVRR++ T D T +DDKDYYGNKRLELAGQL+SLLFEDLFKRFNS+LKR ADMVLSKPNRAA FDI K + + TIT GF HA+STGNW LKRF++DR GVT VLSRLS++S+LGMMTR+ SQF+K RKVSGPR+LQPSQWGMLCPADTPEGE+CGLVKNLALL HVTSD+E P+ RLC+DLGV DV+ SG E+N ++ LV LNG I+GT +P +++R +RR G++GEFVSV +H V+R VYIASDGGRVCRPLL+++ +TRLTQ H+D++ GV L LI +G VEYVDVNEENNCLVAL ++ THLEIDP+T+LGVV+GLIPYPHHNQSPRNTYQCAMGKQA+GT A+N +ER+D LLY +V+PQ PMV TRVLDLV+FD VP GQNA++AVMSYSGYDIEDA+VLN+ SLDRGFGRCMVF+K+Q I+KY NG+ D+IVG S G+ R +Y LD DGI RVG + G IM+NK P + G D + +P +YK P +YVDKV+LT++E +L+K+L+RQTRRPE+GDKFSSRHGQKGVCG I QEDMPF D GICPDLIMNPHGFPSRMTVGKM+EL+AGKAGVL+G +AYGTAFGE++G+AD V C + LV+ G++Y GKD LTSG GEP++ YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS L+MERLMISSDAF+A+VCQGC +LGY GWCQ C+S EK+ IR+PYACKLLFQELQ+MNIVPRL L+++
Sbjct: 32 VGDVKDKWKLLPYFLQLRGLVKQHIDSFNYFTNVDMKNIVRAKANNMVRSDADPKFFLQYTDIQIGSPSIDEEAFVSSSVTPHQCRLRDRTYAAPVYVSVRYRRGNKIVTNNKVLIGRIPIMLRSANCVLTEKGEAELAKLKECPYDPGGYFIVKGVEKVVLIHEQLSKNRVIIEEDAKQNVCASITSSTHERKSRTNIFINKNRVYLKSNSFGSDIPIVIVFRGMGMESDQEIVSLIGSEPDVTDALTASFEEASDLKVFTQLQALEYIGSKMNAVTKVGATGGRHRGXXXXXXXXQDRSLADAARSALANLVLNHVPCEDYNFRLKCIYVAHIVRRIIFTDKDRTRLDDKDYYGNKRLELAGQLLSLLFEDLFKRFNSDLKRQADMVLSKPNRAAVFDILKCIR-TDTITQGFYHALSTGNWTLKRFRMDRAGVTHVLSRLSYMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLCHVTSDEEAAPIKRLCFDLGVTDVSLSSGEEINHSSNYLVVLNGVIIGTHVNPRAFVTRLRRIRRAGLIGEFVSVMMHDVQRVVYIASDGGRVCRPLLLIDPVTHKTRLTQRHLDELRAGVRDLHSLIVEGCVEYVDVNEENNCLVALHESEIGERTTHLEIDPVTILGVVSGLIPYPHHNQSPRNTYQCAMGKQAIGTIAMNQYERIDTLLYTMVYPQMPMVKTRVLDLVNFDHVPAGQNATVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTMIKKYANGSYDRIVGPPDFDSLVSNGGGGAGNMGFRNAKYASLDADGIARVGGVVQNGAIMINKEQPTQFNDSVDGRDPLDVTYSPSPTTYKGPIPAYVDKVLLTSSEANHFLVKVLIRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDQGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLNGRRAYGTAFGEKYGTADNVLDCSRELVKNGFNYAGKDYLTSGITGEPILCYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMISSDAFSADVCQGCRMLGYEGWCQYCKSEEKVVSIRIPYACKLLFQELQAMNIVPRLTLKEY 1178
BLAST of mRNA_H-paniculata_contig247.6697.1 vs. uniprot
Match: A0A024TUJ8_9STRA (DNA-directed RNA polymerase subunit beta n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TUJ8_9STRA) HSP 1 Score: 1496 bits (3872), Expect = 0.000e+0 Identity = 748/1156 (64.71%), Postives = 912/1156 (78.89%), Query Frame = 2
Query: 353 AAMAESEEEEEDGHEQVRGVKEKWKLLPHFLKLRGLMRQHIDSYDYFVNVDISKIVQAKGNREVLSDVDPKFFLQYTKITVGTPCIDEDDYTVKTITPFQCRLRDCTYSAPLWVNVRYTRGRQIVNKSNINIGRIPVMLLSCKCVLTGKSESELADMKECPYDPGGYFVVKGVEKVILMQEQLSKNRVIIEFDAKKNISAAITSSTHERKSRCNIHVKNGKVYMKHNSLGDDVPIVVILRAMGAMSDQEIVQLVGSEPEIVNAFMASLEEAQAVGVYTEKQALSYIGHKMRAPPKAGARVRQQPTFRKPQSPEDEARDILCGVILSHVPVVGYDFRAKIIYTAHIVRRVLMTVIDPTTVDDKDYYGNKRLELAGQLISLLFEDLFKRFNSELKRNADMVLSKPNRAAAFDIGKFLEGSTTITHGFTHAISTGNWVLKRFKVDRQGVTQVLSRLSFISSLGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGLNSSLVFLNGSIVGTTGHPSVLASKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVEHG--RTRLTQTHMDQMALGVLSLQDLIKQGVVEYVDVNEENNCLVALTAVDLSLGHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTTALNMHERLDGLLYALVHPQKPMVTTRVLDLVHFDQVPGGQNASIAVMSYSGYDIEDAVVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGSEASDPRWKRYEQLDEDGICRVGSECKPGTIMVNKHSPAS-----TSGIYGPGQSDFVSAPMSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMSDIRLPYACKLLFQELQSMNIVPRLKLEDF 3799
AA++ ++ +EDG VK KW+LLP+FL+LRGL++QHIDS+DYF VD+ KIV+A+ N + SD DPKFFL YT I +GTP IDED Y +TP QCRLRD TYSAP++V+V+Y G ++V K+ + IGRIP+ML S KCVL K E+ LA +KECPYDPGGYFVVKG EKV+L+ EQLSKNRVI+E D K+N+ A+ITSSTHERKSR NI + G+VY+K NS DD+PIV++ R MG +SDQEIV L+G E ++ + F ASLEEA + V+T+ QAL+YIG+KM++ + G+ Q D A D L ++L+H+P ++FR K IY AHIVRRV++T D + +DDKDYYGNKRLELAGQL+SLLFEDLFK+FNS+LKR ADMVL+KPNRA FDI K + + TIT+GF H +STGNW LKRF++DR GVT VLSRLSF+S+LGMMTR+ SQF+K RKVSGPR+LQPSQWGMLCPADTPEGE+CGLVKNLALL HVTSD+E P+ RLC+DLGV DV SG E+N + LV LNG I+GT P V S++R +RR G++GEFVSV LH V+R VYIASDGGRVCRPLL+V+ + RLTQ + ++ GV ++ LIK+GVVEYVDVNEENNCLVAL D+ + THLEIDP+T+LGVV+GLIPYPHHNQSPRNTYQCAMGKQA+GT +N ER+D LLY +V+PQ PMV TRVLDLV+FDQVP GQNA++AVMSYSGYDIEDA+VLN+ SLDRGFGRCMVF+K+Q +++YPN T D+IVG P E S R +RY LD DGICRVG + G IMVNK SPA+ TS + S +P+SYK Y+DKV+LT++E++ +LIK+L+RQTRRPE+GDKFSSRHGQKGVCG I QEDMPF D G+CPDLIMNPHGFPSRMTVGKM+ELVAGKAGVL G +A+GTAFGE++G+ADRV C + LV G++Y GKD LTSG GEP++ YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGR+RDGGLRLGEMERDCLIGYGAS L++ERLM+SSDAFTANVCQGC +LGY GWCQ C+S EK+ DIR+PYACKLLFQELQ+MNI PRL L+++
Sbjct: 49 AALSSEDQAKEDGF-----VKNKWQLLPYFLQLRGLVKQHIDSFDYFTEVDMKKIVRAQANNTIRSDHDPKFFLTYTDINIGTPSIDEDAYVTTAVTPNQCRLRDRTYSAPIYVSVKYRLGPKVVTKNKVLIGRIPIMLRSAKCVLKDKDEAALAALKECPYDPGGYFVVKGSEKVVLIHEQLSKNRVILEEDPKRNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFVDDLPIVIVFRGMGLVSDQEIVSLIGCEADVTDHFAASLEEASDLKVFTQTQALTYIGNKMKS--RGGS-----------QKVTDAALDALV-MVLNHIPCEDFNFRMKCIYVAHIVRRVILTDKDRSRLDDKDYYGNKRLELAGQLLSLLFEDLFKKFNSDLKRQADMVLNKPNRATVFDIIKCIR-TDTITYGFIHCLSTGNWTLKRFRMDRAGVTHVLSRLSFMSALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLCHVTSDEEPEPIRRLCFDLGVNDVCLSSGEEINHPTTYLVMLNGIIIGTHVDPKVFVSRLRRIRRAGLLGEFVSVMLHDVQRVVYIASDGGRVCRPLLLVDAATQKPRLTQRQITELQTGVRTISSLIKEGVVEYVDVNEENNCLVALHERDIDVKTTHLEIDPVTILGVVSGLIPYPHHNQSPRNTYQCAMGKQAIGTIGMNQFERIDTLLYTMVYPQAPMVKTRVLDLVNFDQVPAGQNATVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTVVKRYPNNTYDRIVG-------PPDFEGSSFRNQRYASLDADGICRVGGQVVSGGIMVNKESPANVDISITSEVQDVSYSP---SPVSYKNATPGYIDKVMLTSSESDQFLIKVLVRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDLGMCPDLIMNPHGFPSRMTVGKMIELVAGKAGVLSGRRAFGTAFGEDYGTADRVLDCSKELVSHGFNYAGKDYLTSGVTGEPILCYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRARDGGLRLGEMERDCLIGYGASMLLLERLMLSSDAFTANVCQGCQMLGYEGWCQYCKSEEKVVDIRIPYACKLLFQELQAMNIAPRLTLQEY 1174
BLAST of mRNA_H-paniculata_contig247.6697.1 vs. uniprot
Match: A0A7S4I9T1_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I9T1_9STRA) HSP 1 Score: 1486 bits (3847), Expect = 0.000e+0 Identity = 743/1158 (64.16%), Postives = 897/1158 (77.46%), Query Frame = 2
Query: 401 VRGVKEKWKLLPHFLKLRGLMRQHIDSYDYFVNVDISKIVQAKGNREVLSDVDPKFFLQYTKITVGTPCIDEDDYTVKTITPFQCRLRDCTYSAPLWVNVRYTRGRQIVNKSNINIGRIPVMLLSCKCVLTGKSESELADMKECPYDPGGYFVVKGVEKVILMQEQLSKNRVIIEFDAKKNISAAITSSTHERKSRCNIHVKNGKVYMKHNSLGDDVPIVVILRAMGAMSDQEIVQLVGSEPEIVNAFMASLEEAQAVGVYTEKQALSYIGHKMRAPPKAGARVRQQPT--FRKPQSPEDEARDILCGVILSHVPVVGYDFRAKIIYTAHIVRRVLMTVIDPTTVDDKDYYGNKRLELAGQLISLLFEDLFKRFNSELKRNADMVLSKPNRAAAFDIGKFLEGSTTITHGFTHAISTGNWVLKRFKVDRQGVTQVLSRLSFISSLGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGLNSSLVFLNGSIVGTTGHPSVLASKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVEHGRT--RLTQTHMDQMALGVLSLQDLIKQGVVEYVDVNEENNCLVALTAVDLS-----------LGHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTTALNMHERLDGLLYALVHPQKPMVTTRVLDLVHFDQVPGGQNASIAVMSYSGYDIEDAVVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGSEASDPRWKRYEQLDEDGICRVGSECKPGTIMVNKHSPASTS----GIYGPGQS-------DFVSAPMSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMSDIRLPYACKLLFQELQSMNIVPRLKLED 3796
V +KEKW+LLPHFLKLRGLM+QHIDS+DYFVN+++ +IVQ+ E+ S+ DPKF+L+YT VG P ++ED Y +PFQCRLRDCTYSAP++VNVRYTRGRQIV K + +GR+P+ML S KC+L GK+E ELA ++ECPYDPGGYFV+KGVEKVILMQEQLSKNRVI+E D K + A+ITSSTHERKS+ I VK+G+VYM+ N+LGDD+PI V +AMG SD EIVQ VGSEPEI++A S+EE +G+YTE QAL YIG+K+RA RV Q FRK S +DEARD+L V+LSHVPV +DFRAK +Y HIVRRVL+ +DDKDYYGNKR+ELAG L+SLLFEDLFK FN +L+R AD VLSKPNRA AFD+ K + IT G AIS+GNWVLKRF++DR GVTQVLSRLS++S++GMMTRV+SQF+K RKVSGPR+LQPSQWGMLCPADTPEGE+CGLVKNLALLAH+T+D++TGP+ RLC D+G +DV L+G E N + LV LNG +VG P +R +RR GM GEFVSVYLH +RAV+IA+DGGRVCRPL++V+ RL Q H++ +A+G + ++DL++QGVVEYVDVNEENNCL+A+T +L + +THLEIDP+T+LGVV+GL+ YPHHNQSPRNTY CAMGKQA+G LN + R+DGL+Y +V+P KPMV +R LDLV+FDQVPGGQNA IA+M+YSGYDIEDAVVLN+ S+DRGFGRCMV RKHQ IR+Y N T D+ G FP G + D R+ R+ +D DGIC VG + G++MVNK SP TS G +GP + + MSY++ A SYVDKV++T+NENE +LIK++LRQ RRPEVGDKF+SRHGQKGVCGIIVPQ DMPF + GICPDLIMNPHGFPSRMTVGK++EL+ GK GV G QA TAFGEEFGSAD + L+ G +Y GKD+ SG GEPL YIF+GPVFY KLKHMV+DKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLI YGAS LIMERLM SSDAF+ANVC CGLL Y WCQ CRS E ++DIRLPYACKLLFQELQSMN++PRL+L+D
Sbjct: 296 VGSLKEKWRLLPHFLKLRGLMKQHIDSFDYFVNIEMKQIVQSPSACEIRSEHDPKFYLRYTDCWVGEPSVEEDSYAFTQASPFQCRLRDCTYSAPIYVNVRYTRGRQIVVKKKVVVGRMPIMLRSSKCLLKGKTERELAKLRECPYDPGGYFVIKGVEKVILMQEQLSKNRVILEIDGKGLVQASITSSTHERKSKAYILVKHGRVYMRSNTLGDDIPIAVAFKAMGMESDLEIVQTVGSEPEIMDALALSMEEPVKLGIYTETQALKYIGNKIRA------RVAPQGFGGFRKTASLQDEARDVLANVVLSHVPVPNFDFRAKAMYVGHIVRRVLLVHTGKMPLDDKDYYGNKRIELAGSLLSLLFEDLFKIFNKDLQREADRVLSKPNRAQAFDVVKTIRPDI-ITGGMQSAISSGNWVLKRFRMDRAGVTQVLSRLSYMSAIGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLAHITTDEDTGPIERLCRDMGTQDVTMLTGNETNANGAYLVLLNGLVVGAHTRPWRFVRDLRRMRRGGMAGEFVSVYLHEGQRAVHIATDGGRVCRPLVIVDERTALPRLKQCHVEGLAVGAVDMRDLLRQGVVEYVDVNEENNCLIAVTERELEQARKVGLDKQKMRYTHLEIDPVTILGVVSGLVAYPHHNQSPRNTYTCAMGKQAIGCIGLNEYARMDGLIYTMVYPHKPMVKSRTLDLVNFDQVPGGQNACIAIMAYSGYDIEDAVVLNKASIDRGFGRCMVLRKHQTSIRRYANMTMDRTCGPPDPDAFPDGED--DKRYARFRGIDRDGICMVGEHMENGSVMVNKESPTDTSTGVGGGFGPDGAAAAVANISYKYTGMSYRSSAPSYVDKVLITSNENEQFLIKVMLRQVRRPEVGDKFASRHGQKGVCGIIVPQVDMPFNEDGICPDLIMNPHGFPSRMTVGKLIELLVGKCGVFEGRQALSTAFGEEFGSADTPDAAAEVLIRNGLNYFGKDVYYSGASGEPLDAYIFSGPVFYMKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASNLIMERLMHSSDAFSANVCMTCGLLQYQNWCQYCRSGEGVADIRLPYACKLLFQELQSMNVLPRLRLKD 1444
BLAST of mRNA_H-paniculata_contig247.6697.1 vs. uniprot
Match: A0A7S4QYU8_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QYU8_9STRA) HSP 1 Score: 1478 bits (3826), Expect = 0.000e+0 Identity = 737/1159 (63.59%), Postives = 896/1159 (77.31%), Query Frame = 2
Query: 401 VRGVKEKWKLLPHFLKLRGLMRQHIDSYDYFVNVDISKIVQAKGNREVLSDVDPKFFLQYTKITVGTPCIDEDDYTVKTITPFQCRLRDCTYSAPLWVNVRYTRGRQIVNKSNINIGRIPVMLLSCKCVLTGKSESELADMKECPYDPGGYFVVKGVEKVILMQEQLSKNRVIIEFDAKKNISAAITSSTHERKSRCNIHVKNGKVYMKHNSLGDDVPIVVILRAMGAMSDQEIVQLVGSEPEIVNAFMASLEEAQAVGVYTEKQALSYIGHKMRAPPKAGARVRQQPTFRKPQSPEDEARDILCGVILSHVPVVGYDFRAKIIYTAHIVRRVLMTVIDPTTVDDKDYYGNKRLELAGQLISLLFEDLFKRFNSELKRNADMVLSKPNRAAAFDIGKFLEGSTTITHGFTHAISTGNWVLKRFKVDRQGVTQVLSRLSFISSLGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGLNSSLVFLNGSIVGTTGHPSVLASKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVEHGRT--RLTQTHMDQMALGVLSLQDLIKQGVVEYVDVNEENNCLVALTAVDLS-----------LGHTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTTALNMHERLDGLLYALVHPQKPMVTTRVLDLVHFDQVPGGQNASIAVMSYSGYDIEDAVVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGSEASDPRWKRYEQLDEDGICRVGSECKPGTIMVNKHSPASTSGIYGPG-----------QSDFVSAPMSYKAPAES--YVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMSDIRLPYACKLLFQELQSMNIVPRLKLEDF 3799
V +++KW+LLPHFLKLRGLM QHIDSY++FVN D+ IVQA E+ S+ DP+F+L+YT VG P ++ED Y TPFQCRLRDCTYSAP++V+VRYTRGRQIV K I IGR+P+ML S KC+LTGK+ +LA MKECP+DPGGYFVVKGVEKVIL+ EQLSKNRVIIE DAKK ISA+ITSSTHERKS+ I++ GK+++K N +DVPI ++++AMG SD EIVQLVGS+PEIV+A SLEE +G+YT+ Q L YIG K+R+ G + +++KPQ+PEDEARD+L V+LSHVPV+ ++FR K IY HIV RV+M + +DDKDYYGNKRLELAG +SLLFEDLFK FN+ LKR AD VL NRA AFD+ K + T IT+G HAIS+GNWVLKRF+VDR GVTQVLSRLS+IS+LGMMTRV+SQF+K RKVSGPR+LQPSQWGMLCPADTPEGE+CGLVKNLALLAH+T+D++T P+ RLC DLGVEDV L+G E+N + + LVFLNG ++G P +R +RR+G GEFVSVYLH + AV+IA+DGGRVCRPL++V+ RL Q H++ +A+G + +++L++ GVVEY+DVNEENNCL+A+T DL + +THLEIDP T+LGVVAGLIP PHHNQSPRNTYQ AMGKQA+G +N + R+DGL+Y +V+P KPMV TR LDL+HFD +P GQNA IAVMSYSGYDIEDAVVLN+ S+DRGFGRCM+ RKHQ IR Y N T D+ G S FP G +D R+++Y+ +D+DGIC VG + GTIMVNK SP TS G Q ++ + MSYK+ A+ +VDKV++++NENE +LIK++ RQTRRPEVGDKF+SRHGQKGVCG+IVPQ DMPF + G PDLIMNPHGFPSRMTVGK++EL+ GKAGV G QAY +AFGEEFGS D + L+ G +Y GKD SG GEPL YIF+GPVFYQKLKHMV+DKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLI YG S LIMERLM SSDAF+ANVC CGLL Y WCQ+CRS EK++DIRLPYACKLLFQELQSMN++PRL+L+DF
Sbjct: 215 VGSLRDKWRLLPHFLKLRGLMTQHIDSYNHFVNTDMKLIVQAPSACEIRSEHDPRFYLRYTNCWVGEPSVEEDSYASTQATPFQCRLRDCTYSAPIYVDVRYTRGRQIVVKRKIMIGRLPIMLRSSKCLLTGKTHRQLARMKECPHDPGGYFVVKGVEKVILIHEQLSKNRVIIEEDAKKCISASITSSTHERKSKAYIYINKGKIFLKSNIFAEDVPIAIVIKAMGVESDLEIVQLVGSDPEIVDALAISLEEPNKLGLYTQLQCLRYIGGKIRSRVSGGPFAAK--SWKKPQAPEDEARDVLANVVLSHVPVINFNFRPKCIYIGHIVLRVVMVHMGKCQLDDKDYYGNKRLELAGNFMSLLFEDLFKLFNANLKREADRVLRHTNRAQAFDVVKIIRPDT-ITNGMVHAISSGNWVLKRFRVDRAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLAHITTDEDTAPIERLCIDLGVEDVNMLTGNEINSMGAYLVFLNGLLLGAHTRPRQFVQDLRTMRRQGQAGEFVSVYLHEGQHAVHIATDGGRVCRPLIIVDEKTALPRLKQVHVEGLAVGAIDIKNLLRHGVVEYIDVNEENNCLIAVTERDLEVARKSGLDKRKMAYTHLEIDPSTILGVVAGLIPNPHHNQSPRNTYQSAMGKQAIGAIGMNQYSRMDGLIYTMVYPMKPMVKTRTLDLIHFDSLPAGQNACIAVMSYSGYDIEDAVVLNKASIDRGFGRCMILRKHQTSIRTYANRTMDRSCGPPDPSAFPDGE--NDKRYEKYKAIDKDGICMVGEQLDSGTIMVNKESPTDTSTNIGGAEFLAGNMAALSQVNYKYSGMSYKSAAKVPVFVDKVLISSNENEQFLIKVMTRQTRRPEVGDKFASRHGQKGVCGLIVPQPDMPFNEFGHPPDLIMNPHGFPSRMTVGKLIELLVGKAGVYEGRQAYASAFGEEFGSTDTPSSASEILIHNGLNYFGKDCFYSGANGEPLDAYIFSGPVFYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGVSNLIMERLMHSSDAFSANVCLTCGLLQYQNWCQHCRSGEKVADIRLPYACKLLFQELQSMNVLPRLRLKDF 1368
BLAST of mRNA_H-paniculata_contig247.6697.1 vs. uniprot
Match: B7FVD4_PHATC (DNA-directed RNA polymerase subunit beta n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVD4_PHATC) HSP 1 Score: 1473 bits (3813), Expect = 0.000e+0 Identity = 729/1157 (63.01%), Postives = 912/1157 (78.82%), Query Frame = 2
Query: 401 VRGVKEKWKLLPHFLKLRGLMRQHIDSYDYFVNVDISKIVQAKGNREVLSDVDPKFFLQYTKITVGTPCIDEDDYTVKTITPFQCRLRDCTYSAPLWVNVRYTRGRQIVNKSNINIGRIPVMLLSCKCVLTGKSESELADMKECPYDPGGYFVVKGVEKVILMQEQLSKNRVIIEFDAKKNISAAITSSTHERKSRCNIHVKNGKVYMKHNSLGDDVPIVVILRAMGAMSDQEIVQLVGSEPEIVNAFMASLEEAQAVGVYTEKQALSYIGHKMRAPPKAGARVRQQPTFRKPQSPEDEARDILCGVILSHVPVVGYDFRAKIIYTAHIVRRVLMTVIDPTTVDDKDYYGNKRLELAGQLISLLFEDLFKRFNSELKRNADMVLSKPNRAAAFDIGKFLEGSTTITHGFTHAISTGNWVLKRFKVDRQGVTQVLSRLSFISSLGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSDQ-ETGPVLRLCYDLGVEDVARLSGGEVNGLNSSLVFLNGSIVGTTGHPSVLASKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVV--EHGRTRLTQTHMDQMALGVLSLQDLIKQGVVEYVDVNEENNCLVALTAVDLSLG-----------HTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTTALNMHERLDGLLYALVHPQKPMVTTRVLDLVHFDQVPGGQNASIAVMSYSGYDIEDAVVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGSEASDPRWKRYEQLDEDGICRVGSECKPGTIMVNKHSPASTS----GI---YGPGQS----DFVSAPMSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMSDIRLPYACKLLFQELQSMNIVPRLKLED 3796
V +++KW+LLP+FL+LR L+RQHIDS+D+FV+V++ +IVQ+ E+ S+ DPKF+L+Y VG P ++ED Y+VK+ TPFQCRLRDCTYSAP++VNVRYTRGRQIV K + IGR+P+ML S KC+L +SE +LA MKECPYDPGGYFV+KGVEKVIL+QEQLSKNRVI+E D K I A+ITSSTHERKS+ I +KNG+VY+K+N+LGDD+P+ V+L+AMG SD E+VQLVGSE I+NA SLEE +G++T+ QAL +IG K+R ++G ++RK SPEDEAR++L V+LSHVPV +DFR K +Y HIVRRVL+ + +DDKDYYGNKRLELAG L+SLLFEDLFK FN +LKR AD+VLSKPNR AFD+ K + T IT+G +AI+TGNWVLKRF++DR GVTQVLSRLS++S+LGMMTR++SQF+K RKVSGPR+LQPSQWGMLCPADTPEGE+CGLVKNLALL H+T+D+ +T P+ R+C DLGVEDV R++G E+N + LVFLNG I+G P L +R +RR+G+ GEFVSVYLH + AV+IA+DGGRVCRPLL+V E G +L Q HM+ +ALG + + DL++QG+VEYVD NEENN L+A+T DL + +THLE+DP T+LGVV G+IP+PHHNQSPRNTY AM KQAMG+ ++N +ER+DGL+Y L++PQKPMV +R LDLV+FD +PGG NA IAVMSYSGYDIEDA++LN+ ++DRGFGRCMV RKHQ +R+Y NGT D+ FP G + D R+ RY +D+DGICRVG + + G++MVNK SPA T+ G+ + G S ++ + +SY+ A +YVDKV++T+NENE +LIK++LRQ RRPE+GDKF+SRHGQKGVCG+IVP+ED+PF + G PDLIMNPHGFPSRMTVGK++EL+ GKAG+ G Q Y +AFGEEFGSAD +AL+ G +Y GKD+L SGT GEPL YIF+GPVFYQKLKHMV+DK HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLI YG S LIMERLM SSDAF+ANVC CGLL Y GWCQ CRS EK++DIRLPYACKLLFQELQSMN++PRL+L+D
Sbjct: 61 VGSLRDKWRLLPYFLRLRSLLRQHIDSFDHFVDVEMQQIVQSPSACEIRSEHDPKFYLRYEACWVGEPSVEEDSYSVKSATPFQCRLRDCTYSAPIYVNVRYTRGRQIVVKRKVMIGRMPIMLRSKKCLLRDRSEDDLAGMKECPYDPGGYFVIKGVEKVILIQEQLSKNRVILEED-NKGIMASITSSTHERKSKAYILIKNGRVYLKNNTLGDDIPVAVVLKAMGIESDLELVQLVGSESPIINALALSLEEPSRLGIHTQAQALRFIGAKIRG--RSGPSGPSS-SYRKNVSPEDEAREVLANVVLSHVPVTHFDFREKALYIGHIVRRVLLVHLGKMPLDDKDYYGNKRLELAGNLLSLLFEDLFKIFNKDLKRQADLVLSKPNRTQAFDVVKTIRPDT-ITNGMINAIATGNWVLKRFRMDRAGVTQVLSRLSYMSALGMMTRINSQFEKTRKVSGPRSLQPSQWGMLCPADTPEGEACGLVKNLALLGHITTDEADTRPIERICRDLGVEDVKRMTGHEINSHQAFLVFLNGLILGVHTRPRELVRNLRKMRRRGLAGEFVSVYLHDEQCAVHIATDGGRVCRPLLIVDEETGLPKLQQIHMESLALGTMDITDLMRQGIVEYVDCNEENNTLIAVTERDLEVAILHGLETRKMRYTHLEVDPFTILGVVGGIIPFPHHNQSPRNTYTVAMAKQAMGSVSMNQYERMDGLIYTLIYPQKPMVKSRTLDLVNFDNIPGGHNACIAVMSYSGYDIEDAIILNKAAVDRGFGRCMVLRKHQTSVRRYANGTMDRTCAPPDPGSFPDGED--DKRFARYMAIDKDGICRVGEKIENGSVMVNKESPADTTSNMAGVDFGFNSGMSMAHLNYKPSGVSYRGSASTYVDKVLITSNENEQFLIKVMLRQVRRPEIGDKFASRHGQKGVCGLIVPEEDLPFNEFGHVPDLIMNPHGFPSRMTVGKLLELLVGKAGLYEGRQGYSSAFGEEFGSADTAQSASEALLRNGLNYTGKDILYSGTNGEPLDAYIFSGPVFYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGVSNLIMERLMHSSDAFSANVCLTCGLLQYEGWCQYCRSGEKVADIRLPYACKLLFQELQSMNVLPRLRLQD 1210
BLAST of mRNA_H-paniculata_contig247.6697.1 vs. uniprot
Match: A0A1E7EUM7_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUM7_9STRA) HSP 1 Score: 1469 bits (3802), Expect = 0.000e+0 Identity = 726/1156 (62.80%), Postives = 898/1156 (77.68%), Query Frame = 2
Query: 401 VRGVKEKWKLLPHFLKLRGLMRQHIDSYDYFVNVDISKIVQAKGNREVLSDVDPKFFLQYTKITVGTPCIDEDDYTVKTITPFQCRLRDCTYSAPLWVNVRYTRGRQIVNKSNINIGRIPVMLLSCKCVLTGKSESELADMKECPYDPGGYFVVKGVEKVILMQEQLSKNRVIIEFDAKKNISAAITSSTHERKSRCNIHVKNGKVYMKHNSLGDDVPIVVILRAMGAMSDQEIVQLVGSEPEIVNAFMASLEEAQAVGVYTEKQALSYIGHKMRAPPKAGARVRQQPTFRKPQSPEDEARDILCGVILSHVPVVGYDFRAKIIYTAHIVRRVLMTVIDPTTVDDKDYYGNKRLELAGQLISLLFEDLFKRFNSELKRNADMVLSKPNRAAAFDIGKFLEGSTTITHGFTHAISTGNWVLKRFKVDRQGVTQVLSRLSFISSLGMMTRVDSQFQKERKVSGPRALQPSQWGMLCPADTPEGESCGLVKNLALLAHVTSDQETGPVLRLCYDLGVEDVARLSGGEVNGLNSSLVFLNGSIVGTTGHPSVLASKIRFLRRKGMVGEFVSVYLHSVRRAVYIASDGGRVCRPLLVVEHGRT--RLTQTHMDQMALGVLSLQDLIKQGVVEYVDVNEENNCLVALTAVDLSLG-----------HTHLEIDPLTLLGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGTTALNMHERLDGLLYALVHPQKPMVTTRVLDLVHFDQVPGGQNASIAVMSYSGYDIEDAVVLNRGSLDRGFGRCMVFRKHQVPIRKYPNGTQDKIVGKVRASEFPRGSEASDPRWKRYEQLDEDGICRVGSECKPGTIMVNKHSPASTSGIYG-----------PGQSDFVSAPMSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEFGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMSDIRLPYACKLLFQELQSMNIVPRLKLED 3796
+ +K+KW+LLPHFLK+R LMRQHIDS+DY VNV++ +IVQ+ RE+ S+ DP F+L+YT +G P ++ED Y V T TPFQCRLRDCTYSAP++VNVRYTRGRQIV K + IG++P+ML S KC+L GKSE +LA MKECPYDPGGYFVVKGVEKVIL+QEQLSKNRVI+E D K I A+ITSSTHERKS+ I +K+GKVY+K+N LG+D+PI ++L+AMG SD E VQLVGSE IV A SLEEA VG++T+ QAL YIG K+R R ++RKP PEDEAR+IL V+LSHVPV +DFRAK IY HI RRVL+ + ++DDKDYYGNKRLELAG L+SLLFEDLFK F+ +LKR ADMVLSKPNRA A+D+ K + T IT+G +AI+TGNWVLKRF++DR GVTQVLSRLSF+S LGMMTR++SQF+K RKVSGPR+LQ SQWGMLCPADTPEGE+CGLVKNLALLAH+T+D++T P+ RLC DLGVEDV RLSG E+N + LV LNG I+G P +R LRR+G+ GEFVS YL+ +RAV+IA+DGGRVCRPL++V+ + +L Q+H++ +ALG + ++ L+++G+VEYVD NEENN L+ALT DL + +THLEIDP T+LGV+ G+IPYPHHNQ+PRNTY AM KQAMGT +N +ER+DGL+Y LV+PQKP+V +R LDLV FD +P GQNA IAVMS+SGYDIEDA++L++ +DRG+GRCMV RKHQ +++YPNG+ D+ G S F G + D R+ RY+ +D+DGIC VG + +PGTIMVNK SPA+T+G G + + + MS+K A +VDKV++++NE+E +LIK++LRQ RRPE+GDKF+SRHGQKGVCG+IV QED+PF + G PDLIMNPHGFPSRMTVGK++EL+ GK+G G Q Y +AFGEE GSAD +AL+ G +Y GKD SG GEPL Y+F+GPVFYQKLKHMV+DK HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLI YGA+ LIMERLM SSDAF+ANVC CGLL Y WCQ CRS EK++DIRLPYACKLLFQELQSMN++PRL+L+D
Sbjct: 82 IGSIKDKWRLLPHFLKIRSLMRQHIDSFDYLVNVELKQIVQSPSAREIRSEHDPNFYLRYTDCWLGEPSLEEDSYAVSTATPFQCRLRDCTYSAPIYVNVRYTRGRQIVVKRKVKIGQMPIMLRSQKCILNGKSEQDLARMKECPYDPGGYFVVKGVEKVILIQEQLSKNRVILEKDNKGEICASITSSTHERKSKAYISMKHGKVYLKNNVLGEDIPIAIVLKAMGIESDVEAVQLVGSESYIVAALAMSLEEASKVGIHTQLQALKYIGSKIR---------RNTNSYRKPMPPEDEAREILDRVVLSHVPVHQFDFRAKAIYVGHITRRVLLVHLGKMSLDDKDYYGNKRLELAGNLLSLLFEDLFKLFSKDLKRQADMVLSKPNRAQAYDVVKSIRPDT-ITNGMINAIATGNWVLKRFRMDRAGVTQVLSRLSFMSCLGMMTRINSQFEKTRKVSGPRSLQASQWGMLCPADTPEGEACGLVKNLALLAHITTDEDTQPIERLCRDLGVEDVLRLSGHEINSHQAYLVLLNGLILGVHTRPIKFVKNLRSLRRRGLTGEFVSFYLNKEQRAVHIATDGGRVCRPLIIVDDNTSLPKLKQSHVEALALGTIDIRYLLQKGIVEYVDCNEENNTLIALTEKDLEIARKQGVENLRMRYTHLEIDPFTILGVIGGIIPYPHHNQAPRNTYTVAMSKQAMGTIGVNAYERMDGLIYTLVYPQKPLVKSRTLDLVGFDNIPAGQNAVIAVMSFSGYDIEDAIILSKSGIDRGYGRCMVLRKHQTSVKRYPNGSIDRTCGPPDVSNFTDGED--DKRYARYKAIDQDGICMVGEKVEPGTIMVNKESPANTTGDIGGADLGLNMGMSAASTQYKPSGMSFKGQAPCHVDKVLISSNEHEQFLIKVMLRQVRRPEIGDKFASRHGQKGVCGLIVQQEDLPFNELGHTPDLIMNPHGFPSRMTVGKLLELLVGKSGTYDGRQGYSSAFGEEHGSADTAEATSEALIRNGLNYTGKDTYYSGFSGEPLDAYVFSGPVFYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGAANLIMERLMHSSDAFSANVCLTCGLLQYENWCQYCRSGEKVADIRLPYACKLLFQELQSMNVLPRLRLQD 1225 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig247.6697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig247.6697.1 >prot_H-paniculata_contig247.6697.1 ID=prot_H-paniculata_contig247.6697.1|Name=mRNA_H-paniculata_contig247.6697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1197bp MLKGANKDLAFLTDVLGERGRDLSAEGRRRATEGGLRKYRDVYGDKMAAMback to top mRNA from alignment at H-paniculata_contig247:155..27798- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig247.6697.1 ID=mRNA_H-paniculata_contig247.6697.1|Name=mRNA_H-paniculata_contig247.6697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=27644bp|location=Sequence derived from alignment at H-paniculata_contig247:155..27798- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig247:155..27798- >mRNA_H-paniculata_contig247.6697.1 ID=mRNA_H-paniculata_contig247.6697.1|Name=mRNA_H-paniculata_contig247.6697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=7182bp|location=Sequence derived from alignment at H-paniculata_contig247:155..27798- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |